RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 HECW1Q76N89 1606 aa20.81■□□□□ 0.92
DDX54-206ENST00000549271 ARHGEF12Q9NZN5 1544 aa20.8■□□□□ 0.92
DDX54-206ENST00000549271 MLECQ14165 292 aa20.78■□□□□ 0.92
DDX54-206ENST00000549271 PLEKHD1A6NEE1 506 aa20.76■□□□□ 0.91
DDX54-206ENST00000549271 DMRT2Q9Y5R5 561 aa20.75■□□□□ 0.91
DDX54-206ENST00000549271 SETD1BQ9UPS6 1966 aaKnown RBP20.73■□□□□ 0.91
DDX54-206ENST00000549271 ATP10AO60312 1499 aa20.71■□□□□ 0.91
DDX54-206ENST00000549271 CEBPAP49715 358 aaPredicted RBP20.7■□□□□ 0.9
DDX54-206ENST00000549271 C9orf84Q5VXU9 1444 aa20.7■□□□□ 0.9
DDX54-206ENST00000549271 SCAPERQ9BY12 1400 aa20.7■□□□□ 0.9
DDX54-206ENST00000549271 PTPRTO14522 1441 aa20.68■□□□□ 0.9
DDX54-206ENST00000549271 UHRF1BP1Q6BDS2 1440 aa20.67■□□□□ 0.9
DDX54-206ENST00000549271 PLCH2O75038 1416 aa20.66■□□□□ 0.9
DDX54-206ENST00000549271 LTBP4Q8N2S1 1624 aa20.66■□□□□ 0.9
DDX54-206ENST00000549271 IQSEC2Q5JU85 1478 aa20.64■□□□□ 0.89
DDX54-206ENST00000549271 C3P01024 1663 aa20.6■□□□□ 0.89
DDX54-206ENST00000549271 MYO5CQ9NQX4 1742 aa20.59■□□□□ 0.89
DDX54-206ENST00000549271 CSRNP3Q8WYN3 585 aa20.59■□□□□ 0.89
DDX54-206ENST00000549271 CDK13Q14004 1512 aaKnown RBP20.58■□□□□ 0.89
DDX54-206ENST00000549271 KDM5CP41229 1560 aa20.57■□□□□ 0.88
DDX54-206ENST00000549271 REREQ9P2R6 1566 aa20.56■□□□□ 0.88
DDX54-206ENST00000549271 ZNF518AQ6AHZ1 1483 aa20.56■□□□□ 0.88
DDX54-206ENST00000549271 RANGAP1P46060 587 aaPredicted RBP20.55■□□□□ 0.88
DDX54-206ENST00000549271 DIP2CQ9Y2E4 1556 aa20.55■□□□□ 0.88
DDX54-206ENST00000549271 EFCAB2Q5VUJ9 269 aa20.54■□□□□ 0.88
DDX54-206ENST00000549271 NCOA1Q15788 1441 aa20.53■□□□□ 0.88
DDX54-206ENST00000549271 TRAPPC8Q9Y2L5 1435 aa20.5■□□□□ 0.87
DDX54-206ENST00000549271 ABCA6Q8N139 1617 aa20.49■□□□□ 0.87
DDX54-206ENST00000549271 EEA1Q15075 1411 aa20.48■□□□□ 0.87
DDX54-206ENST00000549271 AFAP1Q8N556 730 aa20.48■□□□□ 0.87
DDX54-206ENST00000549271 KIF14Q15058 1648 aa20.48■□□□□ 0.87
DDX54-206ENST00000549271 AGLP35573 1532 aa20.48■□□□□ 0.87
DDX54-206ENST00000549271 MLH3Q9UHC1 1453 aa20.45■□□□□ 0.86
DDX54-206ENST00000549271 ARHGAP5Q13017 1502 aa20.44■□□□□ 0.86
DDX54-206ENST00000549271 CAMSAP1Q5T5Y3 1602 aa20.43■□□□□ 0.86
DDX54-206ENST00000549271 CDC42BPBQ9Y5S2 1711 aa20.41■□□□□ 0.86
DDX54-206ENST00000549271 CNTLNQ9NXG0 1405 aa20.4■□□□□ 0.86
DDX54-206ENST00000549271 MROH2AA6NES4 1674 aa20.39■□□□□ 0.86
DDX54-206ENST00000549271 ESF1Q9H501 851 aaKnown RBP20.39■□□□□ 0.85
DDX54-206ENST00000549271 NPATQ14207 1427 aa20.38■□□□□ 0.85
DDX54-206ENST00000549271 UBAP1LF5GYI3 381 aa20.38■□□□□ 0.85
DDX54-206ENST00000549271 MYT1LQ9UL68 1186 aa20.38■□□□□ 0.85
DDX54-206ENST00000549271 TROQ12816 1431 aaPredicted RBP20.37■□□□□ 0.85
DDX54-206ENST00000549271 ZNF335Q9H4Z2 1342 aaPredicted RBP20.37■□□□□ 0.85
DDX54-206ENST00000549271 KIDINS220Q9ULH0 1771 aa20.36■□□□□ 0.85
DDX54-206ENST00000549271 CDK11AQ9UQ88 783 aaPredicted RBP20.36■□□□□ 0.85
DDX54-206ENST00000549271 ITSN2Q9NZM3 1697 aa20.35■□□□□ 0.85
DDX54-206ENST00000549271 FMN1Q68DA7 1419 aa20.35■□□□□ 0.85
DDX54-206ENST00000549271 ABCC1P33527 1531 aa20.34■□□□□ 0.85
DDX54-206ENST00000549271 ZNF142P52746 1687 aaPredicted RBP20.34■□□□□ 0.85
DDX54-206ENST00000549271 NCKAP5LQ9HCH0 1330 aa20.33■□□□□ 0.85
DDX54-206ENST00000549271 LRRIQ1Q96JM4 1722 aa20.33■□□□□ 0.84
DDX54-206ENST00000549271 PREX2Q70Z35 1606 aa20.32■□□□□ 0.84
DDX54-206ENST00000549271 MED1Q15648 1581 aaPredicted RBP20.32■□□□□ 0.84
DDX54-206ENST00000549271 PLA2R1Q13018 1463 aa20.31■□□□□ 0.84
DDX54-206ENST00000549271 CLIP1P30622 1438 aa20.31■□□□□ 0.84
DDX54-206ENST00000549271 ATP1B4Q9UN42 357 aaPredicted RBP20.31■□□□□ 0.84
DDX54-206ENST00000549271 SUPT6HQ7KZ85 1726 aaKnown RBP20.3■□□□□ 0.84
DDX54-206ENST00000549271 MYO3AQ8NEV4 1616 aa20.3■□□□□ 0.84
DDX54-206ENST00000549271 TCOF1Q13428 1488 aaKnown RBP20.3■□□□□ 0.84
DDX54-206ENST00000549271 ZMYM3Q14202 1370 aa20.29■□□□□ 0.84
DDX54-206ENST00000549271 PKD2Q13563 968 aa20.28■□□□□ 0.84
DDX54-206ENST00000549271 CEP170BQ9Y4F5 1589 aaPredicted RBP20.26■□□□□ 0.83
DDX54-206ENST00000549271 ARHGAP35Q9NRY4 1499 aa20.26■□□□□ 0.83
DDX54-206ENST00000549271 CLTCQ00610 1675 aaKnown RBP20.25■□□□□ 0.83
DDX54-206ENST00000549271 HSPA1LP34931 641 aa20.23■□□□□ 0.83
DDX54-206ENST00000549271 CDC42BPAQ5VT25 1732 aa20.23■□□□□ 0.83
DDX54-206ENST00000549271 SAMD9LQ8IVG5 1584 aa20.23■□□□□ 0.83
DDX54-206ENST00000549271 PTPRKQ15262 1439 aa20.21■□□□□ 0.83
DDX54-206ENST00000549271 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
DDX54-206ENST00000549271 PLXNC1O60486 1568 aa20.18■□□□□ 0.82
DDX54-206ENST00000549271 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
DDX54-206ENST00000549271 CPS1P31327 1500 aa20.16■□□□□ 0.82
DDX54-206ENST00000549271 DNMT1P26358 1616 aaKnown RBP20.15■□□□□ 0.82
DDX54-206ENST00000549271 POLR1AO95602 1720 aaPredicted RBP20.15■□□□□ 0.82
DDX54-206ENST00000549271 SCAF1Q9H7N4 1312 aaKnown RBP20.14■□□□□ 0.81
DDX54-206ENST00000549271 TOM1O60784 492 aa20.14■□□□□ 0.81
DDX54-206ENST00000549271 PIP4K2BP78356 416 aa20.14■□□□□ 0.81
DDX54-206ENST00000549271 ATP7AQ04656 1500 aa20.13■□□□□ 0.81
DDX54-206ENST00000549271 SYCP2Q9BX26 1530 aa20.13■□□□□ 0.81
DDX54-206ENST00000549271 INO80Q9ULG1 1556 aaPredicted RBP20.12■□□□□ 0.81
DDX54-206ENST00000549271 A2ML1A8K2U0 1454 aa20.12■□□□□ 0.81
DDX54-206ENST00000549271 SPAG9O60271 1321 aaKnown RBP20.12■□□□□ 0.81
DDX54-206ENST00000549271 NEURL4Q96JN8 1562 aa20.12■□□□□ 0.81
DDX54-206ENST00000549271 CCDC18Q5T9S5 1454 aa20.11■□□□□ 0.81
DDX54-206ENST00000549271 A2MP01023 1474 aa20.11■□□□□ 0.81
DDX54-206ENST00000549271 SHANK2Q9UPX8 1470 aa20.11■□□□□ 0.81
DDX54-206ENST00000549271 ALKQ9UM73 1620 aa20.1■□□□□ 0.81
DDX54-206ENST00000549271 UBTFP17480 764 aaKnown RBP20.1■□□□□ 0.81
DDX54-206ENST00000549271 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
DDX54-206ENST00000549271 CASKIN1Q8WXD9 1431 aa20.06■□□□□ 0.8
DDX54-206ENST00000549271 GPATCH8Q9UKJ3 1502 aaKnown RBP20.06■□□□□ 0.8
DDX54-206ENST00000549271 VWDEQ8N2E2 1590 aa20.05■□□□□ 0.8
DDX54-206ENST00000549271 KIAA1107Q9UPP5 1409 aa20.05■□□□□ 0.8
DDX54-206ENST00000549271 HNRNPMP52272 730 aaKnown RBP eCLIP20.05■□□□□ 0.8
DDX54-206ENST00000549271 GGT6Q6P531 493 aa20.05■□□□□ 0.8
DDX54-206ENST00000549271 ZNF777Q9ULD5 760 aaPredicted RBP20.05■□□□□ 0.8
DDX54-206ENST00000549271 ADGBQ8N7X0 1667 aa20.05■□□□□ 0.8
DDX54-206ENST00000549271 EHMT2Q96KQ7 1210 aa20.02■□□□□ 0.8
DDX54-206ENST00000549271 PLEKHH2Q8IVE3 1493 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms