RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 NEUROD2Q15784 382 aa18.97■□□□□ 0.63
CACNB3-209ENST00000548860 PLIN1O60240 522 aa18.96■□□□□ 0.63
CACNB3-209ENST00000548860 UACAQ9BZF9 1416 aa18.96■□□□□ 0.63
CACNB3-209ENST00000548860 MYOM3Q5VTT5 1437 aa18.95■□□□□ 0.62
CACNB3-209ENST00000548860 CASKIN1Q8WXD9 1431 aa18.95■□□□□ 0.62
CACNB3-209ENST00000548860 CANXP27824 592 aaKnown RBP18.94■□□□□ 0.62
CACNB3-209ENST00000548860 RTN4Q9NQC3 1192 aaKnown RBP18.92■□□□□ 0.62
CACNB3-209ENST00000548860 ARXQ96QS3 562 aa18.91■□□□□ 0.62
CACNB3-209ENST00000548860 NAIPQ13075 1403 aa18.9■□□□□ 0.62
CACNB3-209ENST00000548860 MSH5O43196 834 aa18.89■□□□□ 0.61
CACNB3-209ENST00000548860 URB2Q14146 1524 aaKnown RBP18.89■□□□□ 0.61
CACNB3-209ENST00000548860 JPH4Q96JJ6 628 aa18.89■□□□□ 0.61
CACNB3-209ENST00000548860 CCDC7Q96M83 1385 aa18.88■□□□□ 0.61
CACNB3-209ENST00000548860 WDR43Q15061 677 aaKnown RBP eCLIP18.88■□□□□ 0.61
CACNB3-209ENST00000548860 PRKCSHP14314 528 aaPredicted RBP18.87■□□□□ 0.61
CACNB3-209ENST00000548860 RGS3P49796 1198 aa18.87■□□□□ 0.61
CACNB3-209ENST00000548860 SKAP1Q86WV1 359 aa18.86■□□□□ 0.61
CACNB3-209ENST00000548860 NOP58Q9Y2X3 529 aaKnown RBP18.85■□□□□ 0.61
CACNB3-209ENST00000548860 ERCC6Q03468 1493 aa18.85■□□□□ 0.61
CACNB3-209ENST00000548860 CDK13Q14004 1512 aaKnown RBP18.85■□□□□ 0.61
CACNB3-209ENST00000548860 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
CACNB3-209ENST00000548860 EXOC6Q8TAG9 804 aa18.84■□□□□ 0.61
CACNB3-209ENST00000548860 ABCA10Q8WWZ4 1543 aa18.83■□□□□ 0.61
CACNB3-209ENST00000548860 USP47Q96K76 1375 aa18.83■□□□□ 0.61
CACNB3-209ENST00000548860 AKNAQ7Z591 1439 aa18.83■□□□□ 0.6
CACNB3-209ENST00000548860 FYCO1Q9BQS8 1478 aa18.82■□□□□ 0.6
CACNB3-209ENST00000548860 HFM1A2PYH4 1435 aa18.82■□□□□ 0.6
CACNB3-209ENST00000548860 NUDCQ9Y266 331 aa18.82■□□□□ 0.6
CACNB3-209ENST00000548860 DEKP35659 375 aaKnown RBP18.81■□□□□ 0.6
CACNB3-209ENST00000548860 ROCK2O75116 1388 aaKnown RBP18.8■□□□□ 0.6
CACNB3-209ENST00000548860 CDCA7LQ96GN5 454 aa18.8■□□□□ 0.6
CACNB3-209ENST00000548860 NBPF1Q3BBV0 1214 aa18.79■□□□□ 0.6
CACNB3-209ENST00000548860 CCDC146Q8IYE0 955 aa18.79■□□□□ 0.6
CACNB3-209ENST00000548860 RCAN3Q9UKA8 241 aa18.78■□□□□ 0.6
CACNB3-209ENST00000548860 KNSTRNQ9Y448 316 aa18.78■□□□□ 0.6
CACNB3-209ENST00000548860 PRG4Q92954 1404 aaPredicted RBP18.78■□□□□ 0.6
CACNB3-209ENST00000548860 SLC4A3P48751 1232 aa18.77■□□□□ 0.6
CACNB3-209ENST00000548860 SAFB2Q14151 953 aaKnown RBP eCLIP18.77■□□□□ 0.6
CACNB3-209ENST00000548860 PAK3O75914 559 aaPredicted RBP18.77■□□□□ 0.6
CACNB3-209ENST00000548860 ZBED9Q6R2W3 1325 aa18.76■□□□□ 0.59
CACNB3-209ENST00000548860 NUTM2DQ5VT03 806 aaPredicted RBP18.75■□□□□ 0.59
CACNB3-209ENST00000548860 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
CACNB3-209ENST00000548860 CNTLNQ9NXG0 1405 aa18.75■□□□□ 0.59
CACNB3-209ENST00000548860 PANK3Q9H999 370 aa18.74■□□□□ 0.59
CACNB3-209ENST00000548860 FRAT1Q92837 279 aaPredicted RBP18.73■□□□□ 0.59
CACNB3-209ENST00000548860 ANKRD30AQ9BXX3 1397 aa18.73■□□□□ 0.59
CACNB3-209ENST00000548860 PRDM2Q13029 1718 aa18.72■□□□□ 0.59
CACNB3-209ENST00000548860 NEFMP07197 916 aa18.71■□□□□ 0.59
CACNB3-209ENST00000548860 TMF1P82094 1093 aa18.66■□□□□ 0.58
CACNB3-209ENST00000548860 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.58
CACNB3-209ENST00000548860 KTN1Q86UP2 1357 aaKnown RBP18.64■□□□□ 0.57
CACNB3-209ENST00000548860 SNAPC4Q5SXM2 1469 aa18.63■□□□□ 0.57
CACNB3-209ENST00000548860 RRP7AQ9Y3A4 280 aaKnown RBP18.63■□□□□ 0.57
CACNB3-209ENST00000548860 PPM1GO15355 546 aaPredicted RBP18.63■□□□□ 0.57
CACNB3-209ENST00000548860 MAP3K1Q13233 1512 aa18.63■□□□□ 0.57
CACNB3-209ENST00000548860 CRBNQ96SW2 442 aa18.63■□□□□ 0.57
CACNB3-209ENST00000548860 NLRP13Q86W25 1043 aa18.62■□□□□ 0.57
CACNB3-209ENST00000548860 EPRSP07814 1512 aaKnown RBP18.62■□□□□ 0.57
CACNB3-209ENST00000548860 PNISRQ8TF01 805 aaKnown RBP18.61■□□□□ 0.57
CACNB3-209ENST00000548860 EFCAB5A4FU69 1503 aa18.61■□□□□ 0.57
CACNB3-209ENST00000548860 RRP1P56182 461 aaKnown RBP18.6■□□□□ 0.57
CACNB3-209ENST00000548860 GGT6Q6P531 493 aa18.6■□□□□ 0.57
CACNB3-209ENST00000548860 SPRYD3Q8NCJ5 442 aa18.6■□□□□ 0.57
CACNB3-209ENST00000548860 ANKRD50Q9ULJ7 1429 aa18.6■□□□□ 0.57
CACNB3-209ENST00000548860 BCL2L13Q9BXK5 485 aa18.59■□□□□ 0.57
CACNB3-209ENST00000548860 ANKRD30BQ9BXX2 1392 aa18.59■□□□□ 0.57
CACNB3-209ENST00000548860 PTPN23Q9H3S7 1636 aa18.59■□□□□ 0.57
CACNB3-209ENST00000548860 MYBBP1AQ9BQG0 1328 aaKnown RBP18.59■□□□□ 0.57
CACNB3-209ENST00000548860 KIF21AQ7Z4S6 1674 aa18.58■□□□□ 0.57
CACNB3-209ENST00000548860 CFAP43Q8NDM7 1665 aa18.58■□□□□ 0.57
CACNB3-209ENST00000548860 EIF5BO60841 1220 aaKnown RBP18.58■□□□□ 0.56
CACNB3-209ENST00000548860 DAPK1P53355 1430 aa18.58■□□□□ 0.56
CACNB3-209ENST00000548860 CLUAP1Q96AJ1 413 aa18.58■□□□□ 0.56
CACNB3-209ENST00000548860 IPO9Q96P70 1041 aaKnown RBP18.58■□□□□ 0.56
CACNB3-209ENST00000548860 MAGI3Q5TCQ9 1506 aa18.57■□□□□ 0.56
CACNB3-209ENST00000548860 CARMIL2Q6F5E8 1435 aa18.57■□□□□ 0.56
CACNB3-209ENST00000548860 SLC24A1O60721 1099 aa18.57■□□□□ 0.56
CACNB3-209ENST00000548860 RALBP1Q15311 655 aa18.57■□□□□ 0.56
CACNB3-209ENST00000548860 KIF3BO15066 747 aa18.57■□□□□ 0.56
CACNB3-209ENST00000548860 PLB1Q6P1J6 1458 aa18.57■□□□□ 0.56
CACNB3-209ENST00000548860 KIF15Q9NS87 1388 aa18.57■□□□□ 0.56
CACNB3-209ENST00000548860 FANCIQ9NVI1 1328 aa18.56■□□□□ 0.56
CACNB3-209ENST00000548860 ABCC5O15440 1437 aa18.56■□□□□ 0.56
CACNB3-209ENST00000548860 CUL7Q14999 1698 aa18.56■□□□□ 0.56
CACNB3-209ENST00000548860 PDE4AP27815 886 aa18.55■□□□□ 0.56
CACNB3-209ENST00000548860 STK26Q9P289 416 aa18.55■□□□□ 0.56
CACNB3-209ENST00000548860 CTTNBP2Q8WZ74 1663 aa18.55■□□□□ 0.56
CACNB3-209ENST00000548860 LAMC3Q9Y6N6 1575 aa18.55■□□□□ 0.56
CACNB3-209ENST00000548860 PLEKHG5O94827 1062 aa18.55■□□□□ 0.56
CACNB3-209ENST00000548860 ADAMTS8Q9UP79 889 aa18.54■□□□□ 0.56
CACNB3-209ENST00000548860 GRIN2BQ13224 1484 aa18.54■□□□□ 0.56
CACNB3-209ENST00000548860 AFAP1Q8N556 730 aa18.54■□□□□ 0.56
CACNB3-209ENST00000548860 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.53■□□□□ 0.56
CACNB3-209ENST00000548860 ERICH6BQ5W0A0 696 aa18.53■□□□□ 0.56
CACNB3-209ENST00000548860 THOC2Q8NI27 1593 aaKnown RBP18.53■□□□□ 0.56
CACNB3-209ENST00000548860 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.52■□□□□ 0.56
CACNB3-209ENST00000548860 APAF1O14727 1248 aa18.52■□□□□ 0.56
CACNB3-209ENST00000548860 TRAK1Q9UPV9 953 aa18.52■□□□□ 0.56
CACNB3-209ENST00000548860 EHBP1L1Q8N3D4 1523 aa18.52■□□□□ 0.55
CACNB3-209ENST00000548860 CCDC144AA2RUR9 1427 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms