RNA–Protein interactions for RNA: ENST00000548855.5

PDE1B-205, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best)

Gene PDE1B, Length 4,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-205ENST00000548855 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
PDE1B-205ENST00000548855 ROCK2O75116 1388 aaKnown RBP17.3■□□□□ 0.36
PDE1B-205ENST00000548855 MYOM3Q5VTT5 1437 aa17.3■□□□□ 0.36
PDE1B-205ENST00000548855 SPAG9O60271 1321 aaKnown RBP17.29■□□□□ 0.36
PDE1B-205ENST00000548855 POLA1P09884 1462 aaPredicted RBP17.29■□□□□ 0.36
PDE1B-205ENST00000548855 MRC2Q9UBG0 1479 aa17.29■□□□□ 0.36
PDE1B-205ENST00000548855 KIF3BO15066 747 aa17.28■□□□□ 0.36
PDE1B-205ENST00000548855 GRIN2BQ13224 1484 aa17.27■□□□□ 0.36
PDE1B-205ENST00000548855 TNNT2P45379 298 aaPredicted RBP17.26■□□□□ 0.35
PDE1B-205ENST00000548855 PPP4R2Q9NY27 417 aa17.26■□□□□ 0.35
PDE1B-205ENST00000548855 NEUROD2Q15784 382 aa17.26■□□□□ 0.35
PDE1B-205ENST00000548855 PPM1GO15355 546 aaPredicted RBP17.25■□□□□ 0.35
PDE1B-205ENST00000548855 PEG3Q9GZU2 1588 aa17.24■□□□□ 0.35
PDE1B-205ENST00000548855 ZNF644Q9H582 1327 aaPredicted RBP17.24■□□□□ 0.35
PDE1B-205ENST00000548855 RRBP1Q9P2E9 1410 aaKnown RBP17.24■□□□□ 0.35
PDE1B-205ENST00000548855 MLECQ14165 292 aa17.23■□□□□ 0.35
PDE1B-205ENST00000548855 FYCO1Q9BQS8 1478 aa17.23■□□□□ 0.35
PDE1B-205ENST00000548855 NCOA2Q15596 1464 aa17.22■□□□□ 0.35
PDE1B-205ENST00000548855 NUDCQ9Y266 331 aa17.22■□□□□ 0.35
PDE1B-205ENST00000548855 UNC13AQ9UPW8 1703 aa17.22■□□□□ 0.35
PDE1B-205ENST00000548855 KTN1Q86UP2 1357 aaKnown RBP17.21■□□□□ 0.35
PDE1B-205ENST00000548855 C14orf37Q86TY3 774 aa17.2■□□□□ 0.34
PDE1B-205ENST00000548855 DNMBPQ6XZF7 1577 aa17.18■□□□□ 0.34
PDE1B-205ENST00000548855 SAFB2Q14151 953 aaKnown RBP eCLIP17.18■□□□□ 0.34
PDE1B-205ENST00000548855 RALBP1Q15311 655 aa17.18■□□□□ 0.34
PDE1B-205ENST00000548855 UACAQ9BZF9 1416 aa17.18■□□□□ 0.34
PDE1B-205ENST00000548855 MAPK8IP3Q9UPT6 1336 aa17.18■□□□□ 0.34
PDE1B-205ENST00000548855 HSP90AA1P07900 732 aaKnown RBP17.18■□□□□ 0.34
PDE1B-205ENST00000548855 EFCAB5A4FU69 1503 aa17.18■□□□□ 0.34
PDE1B-205ENST00000548855 SRPK2P78362 688 aaKnown RBP17.17■□□□□ 0.34
PDE1B-205ENST00000548855 LAMC3Q9Y6N6 1575 aa17.17■□□□□ 0.34
PDE1B-205ENST00000548855 B4GALNT3Q6L9W6 998 aa17.16■□□□□ 0.34
PDE1B-205ENST00000548855 CCDC144AA2RUR9 1427 aa17.16■□□□□ 0.34
PDE1B-205ENST00000548855 MORC1Q86VD1 984 aa17.15■□□□□ 0.34
PDE1B-205ENST00000548855 ST20-MTHFSA0A0A6YYL1 179 aa17.14■□□□□ 0.33
PDE1B-205ENST00000548855 U2SURPO15042 1029 aaKnown RBP17.14■□□□□ 0.33
PDE1B-205ENST00000548855 PLEKHG5O94827 1062 aa17.14■□□□□ 0.33
PDE1B-205ENST00000548855 STK26Q9P289 416 aa17.14■□□□□ 0.33
PDE1B-205ENST00000548855 CYB5RLQ6IPT4 315 aa17.14■□□□□ 0.33
PDE1B-205ENST00000548855 MYH16Q9H6N6 1097 aa17.14■□□□□ 0.33
PDE1B-205ENST00000548855 IFT140Q96RY7 1462 aa17.14■□□□□ 0.33
PDE1B-205ENST00000548855 ZBTB7CA1YPR0 619 aa17.13■□□□□ 0.33
PDE1B-205ENST00000548855 HDGFP51858 240 aaKnown RBP17.13■□□□□ 0.33
PDE1B-205ENST00000548855 ABCA10Q8WWZ4 1543 aa17.12■□□□□ 0.33
PDE1B-205ENST00000548855 WASHC2CQ9Y4E1 1318 aa17.11■□□□□ 0.33
PDE1B-205ENST00000548855 NBR1Q14596 966 aa17.11■□□□□ 0.33
PDE1B-205ENST00000548855 PRDM2Q13029 1718 aa17.11■□□□□ 0.33
PDE1B-205ENST00000548855 FTSJ3Q8IY81 847 aaKnown RBP17.1■□□□□ 0.33
PDE1B-205ENST00000548855 FRAT1Q92837 279 aaPredicted RBP17.1■□□□□ 0.33
PDE1B-205ENST00000548855 TIAM1Q13009 1591 aa17.09■□□□□ 0.33
PDE1B-205ENST00000548855 EIF3AQ14152 1382 aaKnown RBP17.09■□□□□ 0.33
PDE1B-205ENST00000548855 LAS1LQ9Y4W2 734 aaKnown RBP17.08■□□□□ 0.33
PDE1B-205ENST00000548855 KIF15Q9NS87 1388 aa17.08■□□□□ 0.33
PDE1B-205ENST00000548855 NLRP13Q86W25 1043 aa17.08■□□□□ 0.32
PDE1B-205ENST00000548855 USP47Q96K76 1375 aa17.07■□□□□ 0.32
PDE1B-205ENST00000548855 PRKRIP1Q9H875 184 aaPredicted RBP17.07■□□□□ 0.32
PDE1B-205ENST00000548855 ANKRD50Q9ULJ7 1429 aa17.06■□□□□ 0.32
PDE1B-205ENST00000548855 PNNQ9H307 717 aaKnown RBP17.05■□□□□ 0.32
PDE1B-205ENST00000548855 ERICH6BQ5W0A0 696 aa17.04■□□□□ 0.32
PDE1B-205ENST00000548855 SNAPC4Q5SXM2 1469 aa17.03■□□□□ 0.32
PDE1B-205ENST00000548855 EHBP1L1Q8N3D4 1523 aa17.02■□□□□ 0.32
PDE1B-205ENST00000548855 HDGFL2Q7Z4V5 671 aaPredicted RBP17.02■□□□□ 0.32
PDE1B-205ENST00000548855 DDRGK1Q96HY6 314 aa17.02■□□□□ 0.32
PDE1B-205ENST00000548855 PRG4Q92954 1404 aaPredicted RBP17.02■□□□□ 0.32
PDE1B-205ENST00000548855 NUTM2DQ5VT03 806 aaPredicted RBP17.02■□□□□ 0.31
PDE1B-205ENST00000548855 RGS3P49796 1198 aa17.01■□□□□ 0.31
PDE1B-205ENST00000548855 RCAN3Q9UKA8 241 aa17.01■□□□□ 0.31
PDE1B-205ENST00000548855 MIA2Q96PC5 1412 aa17.01■□□□□ 0.31
PDE1B-205ENST00000548855 SYNJ2O15056 1496 aa16.99■□□□□ 0.31
PDE1B-205ENST00000548855 PANK3Q9H999 370 aa16.99■□□□□ 0.31
PDE1B-205ENST00000548855 TRAK1Q9UPV9 953 aa16.99■□□□□ 0.31
PDE1B-205ENST00000548855 HFM1A2PYH4 1435 aa16.99■□□□□ 0.31
PDE1B-205ENST00000548855 MYBBP1AQ9BQG0 1328 aaKnown RBP16.98■□□□□ 0.31
PDE1B-205ENST00000548855 MS4A1P11836 297 aa16.98■□□□□ 0.31
PDE1B-205ENST00000548855 TROQ12816 1431 aaPredicted RBP16.98■□□□□ 0.31
PDE1B-205ENST00000548855 U2AF1L5P0DN76 240 aaPredicted RBP16.97■□□□□ 0.31
PDE1B-205ENST00000548855 U2AF1Q01081 240 aaKnown RBP eCLIP16.97■□□□□ 0.31
PDE1B-205ENST00000548855 LMOD2Q6P5Q4 547 aa16.97■□□□□ 0.31
PDE1B-205ENST00000548855 BIVM-ERCC5R4GMW8 1640 aa16.97■□□□□ 0.31
PDE1B-205ENST00000548855 BECN1Q14457 450 aa16.96■□□□□ 0.31
PDE1B-205ENST00000548855 KIAA0586Q9BVV6 1533 aa16.96■□□□□ 0.31
PDE1B-205ENST00000548855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.96■□□□□ 0.31
PDE1B-205ENST00000548855 SOX12O15370 315 aa16.96■□□□□ 0.31
PDE1B-205ENST00000548855 HECW1Q76N89 1606 aa16.95■□□□□ 0.3
PDE1B-205ENST00000548855 CCDC7Q96M83 1385 aa16.94■□□□□ 0.3
PDE1B-205ENST00000548855 KIF7Q2M1P5 1343 aa16.94■□□□□ 0.3
PDE1B-205ENST00000548855 PDE3BQ13370 1112 aa16.93■□□□□ 0.3
PDE1B-205ENST00000548855 TERF2IPQ9NYB0 399 aa16.93■□□□□ 0.3
PDE1B-205ENST00000548855 EPRSP07814 1512 aaKnown RBP16.92■□□□□ 0.3
PDE1B-205ENST00000548855 AFAP1Q8N556 730 aa16.92■□□□□ 0.3
PDE1B-205ENST00000548855 URB2Q14146 1524 aaKnown RBP16.92■□□□□ 0.3
PDE1B-205ENST00000548855 CUL7Q14999 1698 aa16.92■□□□□ 0.3
PDE1B-205ENST00000548855 PCF11O94913 1555 aaKnown RBP16.92■□□□□ 0.3
PDE1B-205ENST00000548855 CHMP4BQ9H444 224 aaKnown RBP16.91■□□□□ 0.3
PDE1B-205ENST00000548855 RBM19Q9Y4C8 960 aaKnown RBP16.91■□□□□ 0.3
PDE1B-205ENST00000548855 VGFO15240 615 aaPredicted RBP16.91■□□□□ 0.3
PDE1B-205ENST00000548855 GOLGA2Q08379 1002 aa16.9■□□□□ 0.3
PDE1B-205ENST00000548855 AEBP2Q6ZN18 517 aaPredicted RBP16.9■□□□□ 0.3
PDE1B-205ENST00000548855 ARHGAP5Q13017 1502 aa16.9■□□□□ 0.3
PDE1B-205ENST00000548855 WASHC2AQ641Q2 1341 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms