RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 DMRT2Q9Y5R5 561 aa32.55■■■□□ 2.8
CTDSP2-204ENST00000548823 PREX1Q8TCU6 1659 aa32.54■■■□□ 2.8
CTDSP2-204ENST00000548823 HECW1Q76N89 1606 aa32.51■■■□□ 2.8
CTDSP2-204ENST00000548823 ARHGEF12Q9NZN5 1544 aa32.49■■■□□ 2.79
CTDSP2-204ENST00000548823 STRCQ7RTU9 1775 aa32.46■■■□□ 2.79
CTDSP2-204ENST00000548823 ATP10AO60312 1499 aa32.43■■■□□ 2.78
CTDSP2-204ENST00000548823 SPATA31D1Q6ZQQ2 1576 aa32.43■■■□□ 2.78
CTDSP2-204ENST00000548823 SCAPERQ9BY12 1400 aa32.42■■■□□ 2.78
CTDSP2-204ENST00000548823 CEBPAP49715 358 aaPredicted RBP32.42■■■□□ 2.78
CTDSP2-204ENST00000548823 C9orf84Q5VXU9 1444 aa32.39■■■□□ 2.78
CTDSP2-204ENST00000548823 CSRNP3Q8WYN3 585 aa32.38■■■□□ 2.77
CTDSP2-204ENST00000548823 SETD1BQ9UPS6 1966 aaKnown RBP32.38■■■□□ 2.77
CTDSP2-204ENST00000548823 PLCH2O75038 1416 aa32.36■■■□□ 2.77
CTDSP2-204ENST00000548823 UHRF1BP1Q6BDS2 1440 aa32.36■■■□□ 2.77
CTDSP2-204ENST00000548823 RANGAP1P46060 587 aaPredicted RBP32.35■■■□□ 2.77
CTDSP2-204ENST00000548823 PTPRTO14522 1441 aa32.32■■■□□ 2.76
CTDSP2-204ENST00000548823 EFCAB2Q5VUJ9 269 aa32.25■■■□□ 2.75
CTDSP2-204ENST00000548823 CDK13Q14004 1512 aaKnown RBP32.22■■■□□ 2.75
CTDSP2-204ENST00000548823 IQSEC2Q5JU85 1478 aa32.21■■■□□ 2.75
CTDSP2-204ENST00000548823 LTBP4Q8N2S1 1624 aa32.21■■■□□ 2.75
CTDSP2-204ENST00000548823 ZNF518AQ6AHZ1 1483 aa32.19■■■□□ 2.74
CTDSP2-204ENST00000548823 MYO5CQ9NQX4 1742 aa32.18■■■□□ 2.74
CTDSP2-204ENST00000548823 C3P01024 1663 aa32.14■■■□□ 2.74
CTDSP2-204ENST00000548823 KDM5CP41229 1560 aa32.14■■■□□ 2.73
CTDSP2-204ENST00000548823 AFAP1Q8N556 730 aa32.12■■■□□ 2.73
CTDSP2-204ENST00000548823 REREQ9P2R6 1566 aa32.11■■■□□ 2.73
CTDSP2-204ENST00000548823 TRAPPC8Q9Y2L5 1435 aa32.09■■■□□ 2.73
CTDSP2-204ENST00000548823 DIP2CQ9Y2E4 1556 aa32.09■■■□□ 2.73
CTDSP2-204ENST00000548823 MYT1LQ9UL68 1186 aa32.08■■■□□ 2.73
CTDSP2-204ENST00000548823 NCOA1Q15788 1441 aa32.07■■■□□ 2.72
CTDSP2-204ENST00000548823 ESF1Q9H501 851 aaKnown RBP32.07■■■□□ 2.72
CTDSP2-204ENST00000548823 EEA1Q15075 1411 aa32.06■■■□□ 2.72
CTDSP2-204ENST00000548823 CDK11AQ9UQ88 783 aaPredicted RBP32.05■■■□□ 2.72
CTDSP2-204ENST00000548823 ARHGAP5Q13017 1502 aa32.03■■■□□ 2.72
CTDSP2-204ENST00000548823 AGLP35573 1532 aa32.02■■■□□ 2.72
CTDSP2-204ENST00000548823 MLH3Q9UHC1 1453 aa32.01■■■□□ 2.71
CTDSP2-204ENST00000548823 KIF14Q15058 1648 aa32■■■□□ 2.71
CTDSP2-204ENST00000548823 ABCA6Q8N139 1617 aa31.99■■■□□ 2.71
CTDSP2-204ENST00000548823 LOC105371045A0A1W2PR82 267 aa31.98■■■□□ 2.71
CTDSP2-204ENST00000548823 ATP1B4Q9UN42 357 aaPredicted RBP31.98■■■□□ 2.71
CTDSP2-204ENST00000548823 CNTLNQ9NXG0 1405 aa31.96■■■□□ 2.71
CTDSP2-204ENST00000548823 TROQ12816 1431 aaPredicted RBP31.93■■■□□ 2.7
CTDSP2-204ENST00000548823 FMN1Q68DA7 1419 aa31.93■■■□□ 2.7
CTDSP2-204ENST00000548823 UBAP1LF5GYI3 381 aa31.93■■■□□ 2.7
CTDSP2-204ENST00000548823 CAMSAP1Q5T5Y3 1602 aa31.93■■■□□ 2.7
CTDSP2-204ENST00000548823 CLIP1P30622 1438 aa31.89■■■□□ 2.7
CTDSP2-204ENST00000548823 NPATQ14207 1427 aa31.88■■■□□ 2.69
CTDSP2-204ENST00000548823 ZNF335Q9H4Z2 1342 aaPredicted RBP31.87■■■□□ 2.69
CTDSP2-204ENST00000548823 CDC42BPBQ9Y5S2 1711 aa31.87■■■□□ 2.69
CTDSP2-204ENST00000548823 NCKAP5LQ9HCH0 1330 aa31.85■■■□□ 2.69
CTDSP2-204ENST00000548823 MROH2AA6NES4 1674 aa31.83■■■□□ 2.69
CTDSP2-204ENST00000548823 ABCC1P33527 1531 aa31.82■■■□□ 2.68
CTDSP2-204ENST00000548823 KIDINS220Q9ULH0 1771 aa31.81■■■□□ 2.68
CTDSP2-204ENST00000548823 ITSN2Q9NZM3 1697 aa31.79■■■□□ 2.68
CTDSP2-204ENST00000548823 ZMYM3Q14202 1370 aa31.79■■■□□ 2.68
CTDSP2-204ENST00000548823 PKD2Q13563 968 aa31.79■■■□□ 2.68
CTDSP2-204ENST00000548823 PREX2Q70Z35 1606 aa31.76■■■□□ 2.68
CTDSP2-204ENST00000548823 PLA2R1Q13018 1463 aa31.76■■■□□ 2.67
CTDSP2-204ENST00000548823 ARHGAP35Q9NRY4 1499 aa31.75■■■□□ 2.67
CTDSP2-204ENST00000548823 ZNF142P52746 1687 aaPredicted RBP31.71■■■□□ 2.67
CTDSP2-204ENST00000548823 LRRIQ1Q96JM4 1722 aa31.71■■■□□ 2.67
CTDSP2-204ENST00000548823 TCOF1Q13428 1488 aaKnown RBP31.7■■■□□ 2.67
CTDSP2-204ENST00000548823 SUPT6HQ7KZ85 1726 aaKnown RBP31.68■■■□□ 2.66
CTDSP2-204ENST00000548823 UBTFP17480 764 aaKnown RBP31.68■■■□□ 2.66
CTDSP2-204ENST00000548823 MYO3AQ8NEV4 1616 aa31.67■■■□□ 2.66
CTDSP2-204ENST00000548823 MED1Q15648 1581 aaPredicted RBP31.67■■■□□ 2.66
CTDSP2-204ENST00000548823 PPP6R1Q9UPN7 881 aa31.65■■■□□ 2.66
CTDSP2-204ENST00000548823 CEP170BQ9Y4F5 1589 aaPredicted RBP31.65■■■□□ 2.66
CTDSP2-204ENST00000548823 SAMD9LQ8IVG5 1584 aa31.64■■■□□ 2.66
CTDSP2-204ENST00000548823 HSPA1LP34931 641 aa31.64■■■□□ 2.66
CTDSP2-204ENST00000548823 CLTCQ00610 1675 aaKnown RBP31.62■■■□□ 2.65
CTDSP2-204ENST00000548823 PTPRKQ15262 1439 aa31.61■■■□□ 2.65
CTDSP2-204ENST00000548823 CDC42BPAQ5VT25 1732 aa31.6■■■□□ 2.65
CTDSP2-204ENST00000548823 SPAG9O60271 1321 aaKnown RBP31.59■■■□□ 2.65
CTDSP2-204ENST00000548823 SCAF1Q9H7N4 1312 aaKnown RBP31.59■■■□□ 2.65
CTDSP2-204ENST00000548823 TOM1O60784 492 aa31.57■■■□□ 2.64
CTDSP2-204ENST00000548823 PIP4K2BP78356 416 aa31.56■■■□□ 2.64
CTDSP2-204ENST00000548823 EHMT2Q96KQ7 1210 aa31.56■■■□□ 2.64
CTDSP2-204ENST00000548823 CCDC18Q5T9S5 1454 aa31.54■■■□□ 2.64
CTDSP2-204ENST00000548823 ZNF777Q9ULD5 760 aaPredicted RBP31.53■■■□□ 2.64
CTDSP2-204ENST00000548823 PLXNC1O60486 1568 aa31.52■■■□□ 2.64
CTDSP2-204ENST00000548823 SYCP2Q9BX26 1530 aa31.51■■■□□ 2.64
CTDSP2-204ENST00000548823 CPS1P31327 1500 aa31.51■■■□□ 2.63
CTDSP2-204ENST00000548823 ATP7AQ04656 1500 aa31.5■■■□□ 2.63
CTDSP2-204ENST00000548823 A2MP01023 1474 aa31.49■■■□□ 2.63
CTDSP2-204ENST00000548823 HNRNPMP52272 730 aaKnown RBP eCLIP31.49■■■□□ 2.63
CTDSP2-204ENST00000548823 GGT6Q6P531 493 aa31.49■■■□□ 2.63
CTDSP2-204ENST00000548823 A2ML1A8K2U0 1454 aa31.48■■■□□ 2.63
CTDSP2-204ENST00000548823 CASKIN1Q8WXD9 1431 aa31.47■■■□□ 2.63
CTDSP2-204ENST00000548823 DNMT1P26358 1616 aaKnown RBP31.47■■■□□ 2.63
CTDSP2-204ENST00000548823 PHF23Q9BUL5 403 aaPredicted RBP31.46■■■□□ 2.63
CTDSP2-204ENST00000548823 SHANK2Q9UPX8 1470 aa31.44■■■□□ 2.62
CTDSP2-204ENST00000548823 INO80Q9ULG1 1556 aaPredicted RBP31.44■■■□□ 2.62
CTDSP2-204ENST00000548823 KIAA1107Q9UPP5 1409 aa31.43■■■□□ 2.62
CTDSP2-204ENST00000548823 GPATCH8Q9UKJ3 1502 aaKnown RBP31.42■■■□□ 2.62
CTDSP2-204ENST00000548823 POLR1AO95602 1720 aaPredicted RBP31.41■■■□□ 2.62
CTDSP2-204ENST00000548823 PLEKHH2Q8IVE3 1493 aa31.39■■■□□ 2.62
CTDSP2-204ENST00000548823 NEURL4Q96JN8 1562 aa31.38■■■□□ 2.61
CTDSP2-204ENST00000548823 ADGBQ8N7X0 1667 aa31.35■■■□□ 2.61
CTDSP2-204ENST00000548823 CFDP1Q9UEE9 299 aaPredicted RBP31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms