RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 KIF14Q15058 1648 aa10.22□□□□□ -0.77
PDZRN4-204ENST00000548316 ABCA8O94911 1581 aa10.22□□□□□ -0.77
PDZRN4-204ENST00000548316 MBD5Q9P267 1494 aa10.21□□□□□ -0.78
PDZRN4-204ENST00000548316 SYNJ2O15056 1496 aa10.21□□□□□ -0.78
PDZRN4-204ENST00000548316 TONSLQ96HA7 1378 aa10.21□□□□□ -0.78
PDZRN4-204ENST00000548316 PZPP20742 1482 aa10.2□□□□□ -0.78
PDZRN4-204ENST00000548316 RPRD2Q5VT52 1461 aaKnown RBP10.2□□□□□ -0.78
PDZRN4-204ENST00000548316 ANKRD30BQ9BXX2 1392 aa10.19□□□□□ -0.78
PDZRN4-204ENST00000548316 TROQ12816 1431 aaPredicted RBP10.19□□□□□ -0.78
PDZRN4-204ENST00000548316 DDX10Q13206 875 aaKnown RBP10.19□□□□□ -0.78
PDZRN4-204ENST00000548316 CAMSAP2Q08AD1 1489 aa10.18□□□□□ -0.78
PDZRN4-204ENST00000548316 ABCC10Q5T3U5 1492 aa10.18□□□□□ -0.78
PDZRN4-204ENST00000548316 GPATCH8Q9UKJ3 1502 aaKnown RBP10.17□□□□□ -0.78
PDZRN4-204ENST00000548316 SPATA31E1Q6ZUB1 1445 aa10.17□□□□□ -0.78
PDZRN4-204ENST00000548316 KDM5DQ9BY66 1539 aa10.17□□□□□ -0.78
PDZRN4-204ENST00000548316 NCOA1Q15788 1441 aa10.16□□□□□ -0.78
PDZRN4-204ENST00000548316 SHANK2Q9UPX8 1470 aa10.15□□□□□ -0.78
PDZRN4-204ENST00000548316 PLB1Q6P1J6 1458 aa10.14□□□□□ -0.79
PDZRN4-204ENST00000548316 MPHOSPH9Q99550 1183 aa10.14□□□□□ -0.79
PDZRN4-204ENST00000548316 RRP7BPQ9NSQ0 103 aa10.14□□□□□ -0.79
PDZRN4-204ENST00000548316 PRG4Q92954 1404 aaPredicted RBP10.14□□□□□ -0.79
PDZRN4-204ENST00000548316 ARHGEF5Q12774 1597 aa10.13□□□□□ -0.79
PDZRN4-204ENST00000548316 BCORL1Q5H9F3 1711 aa10.12□□□□□ -0.79
PDZRN4-204ENST00000548316 SHROOM2Q13796 1616 aa10.12□□□□□ -0.79
PDZRN4-204ENST00000548316 WASHC2AQ641Q2 1341 aa10.12□□□□□ -0.79
PDZRN4-204ENST00000548316 CNTLNQ9NXG0 1405 aa10.12□□□□□ -0.79
PDZRN4-204ENST00000548316 CDC42BPBQ9Y5S2 1711 aa10.11□□□□□ -0.79
PDZRN4-204ENST00000548316 HIRIP3Q9BW71 556 aaPredicted RBP10.11□□□□□ -0.79
PDZRN4-204ENST00000548316 KDM5CP41229 1560 aa10.11□□□□□ -0.79
PDZRN4-204ENST00000548316 PREX2Q70Z35 1606 aa10.1□□□□□ -0.79
PDZRN4-204ENST00000548316 ZNF644Q9H582 1327 aaPredicted RBP10.1□□□□□ -0.79
PDZRN4-204ENST00000548316 HSPA5P11021 654 aaKnown RBP10.1□□□□□ -0.79
PDZRN4-204ENST00000548316 CHIC2Q9UKJ5 165 aa10.09□□□□□ -0.79
PDZRN4-204ENST00000548316 ATP10BO94823 1461 aa10.09□□□□□ -0.79
PDZRN4-204ENST00000548316 PTPRGP23470 1445 aa10.09□□□□□ -0.79
PDZRN4-204ENST00000548316 MAST1Q9Y2H9 1570 aa10.09□□□□□ -0.79
PDZRN4-204ENST00000548316 E9PCH4 1651 aa10.08□□□□□ -0.8
PDZRN4-204ENST00000548316 CCDC7Q96M83 1385 aa10.08□□□□□ -0.8
PDZRN4-204ENST00000548316 UHRF1BP1Q6BDS2 1440 aa10.08□□□□□ -0.8
PDZRN4-204ENST00000548316 L3MBTL2Q969R5 705 aa10.08□□□□□ -0.8
PDZRN4-204ENST00000548316 ANP32CO43423 234 aa10.08□□□□□ -0.8
PDZRN4-204ENST00000548316 NBPF8Q3BBV2 869 aa10.08□□□□□ -0.8
PDZRN4-204ENST00000548316 KIAA1107Q9UPP5 1409 aa10.07□□□□□ -0.8
PDZRN4-204ENST00000548316 TSHZ2Q9NRE2 1034 aa10.07□□□□□ -0.8
PDZRN4-204ENST00000548316 CHD1O14646 1710 aa10.07□□□□□ -0.8
PDZRN4-204ENST00000548316 SAMD9LQ8IVG5 1584 aa10.07□□□□□ -0.8
PDZRN4-204ENST00000548316 ARHGEF12Q9NZN5 1544 aa10.07□□□□□ -0.8
PDZRN4-204ENST00000548316 C11orf95C9JLR9 678 aaPredicted RBP10.06□□□□□ -0.8
PDZRN4-204ENST00000548316 UNC13BO14795 1591 aa10.06□□□□□ -0.8
PDZRN4-204ENST00000548316 CARMIL2Q6F5E8 1435 aa10.05□□□□□ -0.8
PDZRN4-204ENST00000548316 ERCC6Q03468 1493 aa10.05□□□□□ -0.8
PDZRN4-204ENST00000548316 RALGAPBQ86X10 1494 aa10.04□□□□□ -0.8
PDZRN4-204ENST00000548316 EIF4G2P78344 907 aaKnown RBP eCLIP10.02□□□□□ -0.8
PDZRN4-204ENST00000548316 FOXD1Q16676 465 aa10.02□□□□□ -0.8
PDZRN4-204ENST00000548316 DHX29Q7Z478 1369 aaKnown RBP10.02□□□□□ -0.81
PDZRN4-204ENST00000548316 LAMC1P11047 1609 aa10.02□□□□□ -0.81
PDZRN4-204ENST00000548316 TRIM52Q96A61 297 aa10.02□□□□□ -0.81
PDZRN4-204ENST00000548316 CDK11AQ9UQ88 783 aaPredicted RBP10.02□□□□□ -0.81
PDZRN4-204ENST00000548316 PLXNC1O60486 1568 aa10.02□□□□□ -0.81
PDZRN4-204ENST00000548316 C9orf84Q5VXU9 1444 aa10.01□□□□□ -0.81
PDZRN4-204ENST00000548316 JPH4Q96JJ6 628 aa10.01□□□□□ -0.81
PDZRN4-204ENST00000548316 TRPM1Q7Z4N2 1603 aa10.01□□□□□ -0.81
PDZRN4-204ENST00000548316 ANKRD30AQ9BXX3 1397 aa10□□□□□ -0.81
PDZRN4-204ENST00000548316 TTC37Q6PGP7 1564 aa10□□□□□ -0.81
PDZRN4-204ENST00000548316 ANKRD50Q9ULJ7 1429 aa10□□□□□ -0.81
PDZRN4-204ENST00000548316 IQGAP3Q86VI3 1631 aa10□□□□□ -0.81
PDZRN4-204ENST00000548316 ARID3CA6NKF2 412 aa9.99□□□□□ -0.81
PDZRN4-204ENST00000548316 MYO5CQ9NQX4 1742 aa9.99□□□□□ -0.81
PDZRN4-204ENST00000548316 KIF7Q2M1P5 1343 aa9.99□□□□□ -0.81
PDZRN4-204ENST00000548316 MAGI2Q86UL8 1455 aa9.99□□□□□ -0.81
PDZRN4-204ENST00000548316 CCDC184Q52MB2 194 aa9.98□□□□□ -0.81
PDZRN4-204ENST00000548316 CFDP1Q9UEE9 299 aaPredicted RBP9.98□□□□□ -0.81
PDZRN4-204ENST00000548316 FKBP8Q14318 412 aa9.97□□□□□ -0.81
PDZRN4-204ENST00000548316 CHMP7Q8WUX9 453 aaPredicted RBP9.97□□□□□ -0.81
PDZRN4-204ENST00000548316 PRKRIP1Q9H875 184 aaPredicted RBP9.97□□□□□ -0.81
PDZRN4-204ENST00000548316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.97□□□□□ -0.81
PDZRN4-204ENST00000548316 CCDC141Q6ZP82 1450 aa9.97□□□□□ -0.81
PDZRN4-204ENST00000548316 MYT1Q01538 1121 aa9.96□□□□□ -0.81
PDZRN4-204ENST00000548316 SLC4A1APQ9BWU0 796 aaKnown RBP9.96□□□□□ -0.81
PDZRN4-204ENST00000548316 FAM135AQ9P2D6 1515 aa9.96□□□□□ -0.81
PDZRN4-204ENST00000548316 RNF17Q9BXT8 1623 aaKnown RBP9.95□□□□□ -0.82
PDZRN4-204ENST00000548316 ARID4BQ4LE39 1312 aaPredicted RBP9.95□□□□□ -0.82
PDZRN4-204ENST00000548316 CLASP1Q7Z460 1538 aa9.95□□□□□ -0.82
PDZRN4-204ENST00000548316 ABCC2Q92887 1545 aa9.95□□□□□ -0.82
PDZRN4-204ENST00000548316 ERCC6L2Q5T890 1561 aa9.95□□□□□ -0.82
PDZRN4-204ENST00000548316 PLA2R1Q13018 1463 aa9.94□□□□□ -0.82
PDZRN4-204ENST00000548316 SYCP2Q9BX26 1530 aa9.93□□□□□ -0.82
PDZRN4-204ENST00000548316 ATP10AO60312 1499 aa9.93□□□□□ -0.82
PDZRN4-204ENST00000548316 USP47Q96K76 1375 aa9.93□□□□□ -0.82
PDZRN4-204ENST00000548316 ZCCHC11Q5TAX3 1644 aaKnown RBP9.92□□□□□ -0.82
PDZRN4-204ENST00000548316 PRDM15P57071 1507 aaPredicted RBP9.92□□□□□ -0.82
PDZRN4-204ENST00000548316 PKD2Q13563 968 aa9.92□□□□□ -0.82
PDZRN4-204ENST00000548316 KIF15Q9NS87 1388 aa9.92□□□□□ -0.82
PDZRN4-204ENST00000548316 ZBED9Q6R2W3 1325 aa9.91□□□□□ -0.82
PDZRN4-204ENST00000548316 UHRF1BP1LA0JNW5 1464 aa9.91□□□□□ -0.82
PDZRN4-204ENST00000548316 ERICH6BQ5W0A0 696 aa9.91□□□□□ -0.82
PDZRN4-204ENST00000548316 DEPDC5O75140 1603 aa9.91□□□□□ -0.82
PDZRN4-204ENST00000548316 GPRASP1Q5JY77 1395 aa9.9□□□□□ -0.82
PDZRN4-204ENST00000548316 ABCC1P33527 1531 aa9.9□□□□□ -0.83
PDZRN4-204ENST00000548316 PLEKHD1A6NEE1 506 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms