RNA–Protein interactions for RNA: ENST00000548177.5

CALCOCO1-209, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-209ENST00000548177 ILDR2Q71H61 639 aa17.13■□□□□ 0.33
CALCOCO1-209ENST00000548177 SCAPERQ9BY12 1400 aa17.12■□□□□ 0.33
CALCOCO1-209ENST00000548177 MAGI2Q86UL8 1455 aa17.12■□□□□ 0.33
CALCOCO1-209ENST00000548177 ATP1B4Q9UN42 357 aaPredicted RBP17.11■□□□□ 0.33
CALCOCO1-209ENST00000548177 PREX1Q8TCU6 1659 aa17.1■□□□□ 0.33
CALCOCO1-209ENST00000548177 MYT1LQ9UL68 1186 aa17.09■□□□□ 0.33
CALCOCO1-209ENST00000548177 DMRT2Q9Y5R5 561 aa17.09■□□□□ 0.33
CALCOCO1-209ENST00000548177 ATP10AO60312 1499 aa17.07■□□□□ 0.32
CALCOCO1-209ENST00000548177 SOCS7O14512 581 aa17.07■□□□□ 0.32
CALCOCO1-209ENST00000548177 CDK13Q14004 1512 aaKnown RBP17.06■□□□□ 0.32
CALCOCO1-209ENST00000548177 SETD1BQ9UPS6 1966 aaKnown RBP17.06■□□□□ 0.32
CALCOCO1-209ENST00000548177 STRCQ7RTU9 1775 aa17.06■□□□□ 0.32
CALCOCO1-209ENST00000548177 PLCH2O75038 1416 aa17.05■□□□□ 0.32
CALCOCO1-209ENST00000548177 EFCAB2Q5VUJ9 269 aa17.05■□□□□ 0.32
CALCOCO1-209ENST00000548177 ARHGEF12Q9NZN5 1544 aa17.05■□□□□ 0.32
CALCOCO1-209ENST00000548177 C9orf84Q5VXU9 1444 aa17.04■□□□□ 0.32
CALCOCO1-209ENST00000548177 MYO5CQ9NQX4 1742 aa17.02■□□□□ 0.32
CALCOCO1-209ENST00000548177 EHMT2Q96KQ7 1210 aa17.01■□□□□ 0.31
CALCOCO1-209ENST00000548177 UHRF1BP1Q6BDS2 1440 aa17.01■□□□□ 0.31
CALCOCO1-209ENST00000548177 AFAP1Q8N556 730 aa17■□□□□ 0.31
CALCOCO1-209ENST00000548177 ESF1Q9H501 851 aaKnown RBP16.98■□□□□ 0.31
CALCOCO1-209ENST00000548177 EEA1Q15075 1411 aa16.97■□□□□ 0.31
CALCOCO1-209ENST00000548177 CDK11AQ9UQ88 783 aaPredicted RBP16.97■□□□□ 0.31
CALCOCO1-209ENST00000548177 SPATA31D1Q6ZQQ2 1576 aa16.95■□□□□ 0.3
CALCOCO1-209ENST00000548177 ARHGAP5Q13017 1502 aa16.95■□□□□ 0.3
CALCOCO1-209ENST00000548177 C3P01024 1663 aa16.94■□□□□ 0.3
CALCOCO1-209ENST00000548177 ZNF518AQ6AHZ1 1483 aa16.94■□□□□ 0.3
CALCOCO1-209ENST00000548177 KIF14Q15058 1648 aa16.94■□□□□ 0.3
CALCOCO1-209ENST00000548177 UBTFP17480 764 aaKnown RBP16.93■□□□□ 0.3
CALCOCO1-209ENST00000548177 PTPRTO14522 1441 aa16.92■□□□□ 0.3
CALCOCO1-209ENST00000548177 DIP2CQ9Y2E4 1556 aa16.89■□□□□ 0.3
CALCOCO1-209ENST00000548177 KDM5CP41229 1560 aa16.89■□□□□ 0.29
CALCOCO1-209ENST00000548177 FMN1Q68DA7 1419 aa16.88■□□□□ 0.29
CALCOCO1-209ENST00000548177 CDC42BPBQ9Y5S2 1711 aa16.87■□□□□ 0.29
CALCOCO1-209ENST00000548177 ABCA6Q8N139 1617 aa16.87■□□□□ 0.29
CALCOCO1-209ENST00000548177 CLIP1P30622 1438 aa16.87■□□□□ 0.29
CALCOCO1-209ENST00000548177 TROQ12816 1431 aaPredicted RBP16.87■□□□□ 0.29
CALCOCO1-209ENST00000548177 TRAPPC8Q9Y2L5 1435 aa16.87■□□□□ 0.29
CALCOCO1-209ENST00000548177 LTBP4Q8N2S1 1624 aa16.86■□□□□ 0.29
CALCOCO1-209ENST00000548177 MLH3Q9UHC1 1453 aa16.84■□□□□ 0.29
CALCOCO1-209ENST00000548177 REREQ9P2R6 1566 aa16.84■□□□□ 0.29
CALCOCO1-209ENST00000548177 LRRIQ1Q96JM4 1722 aa16.83■□□□□ 0.28
CALCOCO1-209ENST00000548177 ARHGAP35Q9NRY4 1499 aa16.82■□□□□ 0.28
CALCOCO1-209ENST00000548177 UBAP1LF5GYI3 381 aa16.82■□□□□ 0.28
CALCOCO1-209ENST00000548177 NCOA1Q15788 1441 aa16.81■□□□□ 0.28
CALCOCO1-209ENST00000548177 NCKAP5LQ9HCH0 1330 aa16.81■□□□□ 0.28
CALCOCO1-209ENST00000548177 CAMSAP1Q5T5Y3 1602 aa16.81■□□□□ 0.28
CALCOCO1-209ENST00000548177 AGLP35573 1532 aa16.8■□□□□ 0.28
CALCOCO1-209ENST00000548177 IQSEC2Q5JU85 1478 aa16.8■□□□□ 0.28
CALCOCO1-209ENST00000548177 KIDINS220Q9ULH0 1771 aa16.79■□□□□ 0.28
CALCOCO1-209ENST00000548177 ITSN2Q9NZM3 1697 aa16.79■□□□□ 0.28
CALCOCO1-209ENST00000548177 ZNF777Q9ULD5 760 aaPredicted RBP16.79■□□□□ 0.28
CALCOCO1-209ENST00000548177 CNTLNQ9NXG0 1405 aa16.79■□□□□ 0.28
CALCOCO1-209ENST00000548177 ZNF335Q9H4Z2 1342 aaPredicted RBP16.78■□□□□ 0.28
CALCOCO1-209ENST00000548177 SUPT6HQ7KZ85 1726 aaKnown RBP16.78■□□□□ 0.28
CALCOCO1-209ENST00000548177 PREX2Q70Z35 1606 aa16.78■□□□□ 0.28
CALCOCO1-209ENST00000548177 ABCC1P33527 1531 aa16.77■□□□□ 0.28
CALCOCO1-209ENST00000548177 ZMYM3Q14202 1370 aa16.77■□□□□ 0.27
CALCOCO1-209ENST00000548177 CDC42BPAQ5VT25 1732 aa16.74■□□□□ 0.27
CALCOCO1-209ENST00000548177 MROH2AA6NES4 1674 aa16.73■□□□□ 0.27
CALCOCO1-209ENST00000548177 SCAF1Q9H7N4 1312 aaKnown RBP16.72■□□□□ 0.27
CALCOCO1-209ENST00000548177 CLTCQ00610 1675 aaKnown RBP16.72■□□□□ 0.27
CALCOCO1-209ENST00000548177 NPATQ14207 1427 aa16.72■□□□□ 0.27
CALCOCO1-209ENST00000548177 HNRNPMP52272 730 aaKnown RBP eCLIP16.72■□□□□ 0.27
CALCOCO1-209ENST00000548177 SPAG9O60271 1321 aaKnown RBP16.71■□□□□ 0.27
CALCOCO1-209ENST00000548177 GGT6Q6P531 493 aa16.71■□□□□ 0.27
CALCOCO1-209ENST00000548177 SAMD9LQ8IVG5 1584 aa16.7■□□□□ 0.26
CALCOCO1-209ENST00000548177 PKD2Q13563 968 aa16.7■□□□□ 0.26
CALCOCO1-209ENST00000548177 PIP4K2BP78356 416 aa16.68■□□□□ 0.26
CALCOCO1-209ENST00000548177 MYO3AQ8NEV4 1616 aa16.67■□□□□ 0.26
CALCOCO1-209ENST00000548177 PPP6R1Q9UPN7 881 aa16.67■□□□□ 0.26
CALCOCO1-209ENST00000548177 CCDC18Q5T9S5 1454 aa16.67■□□□□ 0.26
CALCOCO1-209ENST00000548177 SYCP2Q9BX26 1530 aa16.66■□□□□ 0.26
CALCOCO1-209ENST00000548177 CEP170BQ9Y4F5 1589 aaPredicted RBP16.65■□□□□ 0.26
CALCOCO1-209ENST00000548177 CASKIN1Q8WXD9 1431 aa16.65■□□□□ 0.26
CALCOCO1-209ENST00000548177 ZNF142P52746 1687 aaPredicted RBP16.65■□□□□ 0.26
CALCOCO1-209ENST00000548177 HSPA1LP34931 641 aa16.64■□□□□ 0.25
CALCOCO1-209ENST00000548177 PLA2R1Q13018 1463 aa16.64■□□□□ 0.25
CALCOCO1-209ENST00000548177 PTPRKQ15262 1439 aa16.63■□□□□ 0.25
CALCOCO1-209ENST00000548177 ATP7AQ04656 1500 aa16.63■□□□□ 0.25
CALCOCO1-209ENST00000548177 A2MP01023 1474 aa16.62■□□□□ 0.25
CALCOCO1-209ENST00000548177 TOM1O60784 492 aa16.62■□□□□ 0.25
CALCOCO1-209ENST00000548177 CFDP1Q9UEE9 299 aaPredicted RBP16.62■□□□□ 0.25
CALCOCO1-209ENST00000548177 TCOF1Q13428 1488 aaKnown RBP16.61■□□□□ 0.25
CALCOCO1-209ENST00000548177 GPATCH8Q9UKJ3 1502 aaKnown RBP16.61■□□□□ 0.25
CALCOCO1-209ENST00000548177 MED1Q15648 1581 aaPredicted RBP16.58■□□□□ 0.24
CALCOCO1-209ENST00000548177 PLXNC1O60486 1568 aa16.57■□□□□ 0.24
CALCOCO1-209ENST00000548177 INO80Q9ULG1 1556 aaPredicted RBP16.57■□□□□ 0.24
CALCOCO1-209ENST00000548177 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
CALCOCO1-209ENST00000548177 SENP3Q9H4L4 574 aaPredicted RBP16.57■□□□□ 0.24
CALCOCO1-209ENST00000548177 DNMT1P26358 1616 aaKnown RBP16.56■□□□□ 0.24
CALCOCO1-209ENST00000548177 PLEKHH2Q8IVE3 1493 aa16.56■□□□□ 0.24
CALCOCO1-209ENST00000548177 KIAA1107Q9UPP5 1409 aa16.56■□□□□ 0.24
CALCOCO1-209ENST00000548177 CCNB3Q8WWL7 1395 aa16.56■□□□□ 0.24
CALCOCO1-209ENST00000548177 POLR1AO95602 1720 aaPredicted RBP16.56■□□□□ 0.24
CALCOCO1-209ENST00000548177 ADGBQ8N7X0 1667 aa16.56■□□□□ 0.24
CALCOCO1-209ENST00000548177 A2ML1A8K2U0 1454 aa16.55■□□□□ 0.24
CALCOCO1-209ENST00000548177 FBXO31Q5XUX0 539 aaPredicted RBP16.55■□□□□ 0.24
CALCOCO1-209ENST00000548177 FYCO1Q9BQS8 1478 aa16.54■□□□□ 0.24
CALCOCO1-209ENST00000548177 ZNF644Q9H582 1327 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms