RNA–Protein interactions for RNA: ENST00000547685.5

MMP19-205, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-205ENST00000547685 PBRM1Q86U86 1689 aa18.55■□□□□ 0.56
MMP19-205ENST00000547685 NCOA1Q15788 1441 aa18.55■□□□□ 0.56
MMP19-205ENST00000547685 FAM50AQ14320 339 aaKnown RBP18.55■□□□□ 0.56
MMP19-205ENST00000547685 EIF4G2P78344 907 aaKnown RBP eCLIP18.54■□□□□ 0.56
MMP19-205ENST00000547685 PTPN23Q9H3S7 1636 aa18.54■□□□□ 0.56
MMP19-205ENST00000547685 MRS2Q9HD23 443 aa18.52■□□□□ 0.56
MMP19-205ENST00000547685 FYCO1Q9BQS8 1478 aa18.52■□□□□ 0.56
MMP19-205ENST00000547685 GSE1Q14687 1217 aa18.52■□□□□ 0.55
MMP19-205ENST00000547685 CUL7Q14999 1698 aa18.51■□□□□ 0.55
MMP19-205ENST00000547685 MAGI1Q96QZ7 1491 aaPredicted RBP18.5■□□□□ 0.55
MMP19-205ENST00000547685 CCDC7Q96M83 1385 aa18.5■□□□□ 0.55
MMP19-205ENST00000547685 HSPA5P11021 654 aaKnown RBP18.49■□□□□ 0.55
MMP19-205ENST00000547685 GLIPR1L2Q4G1C9 344 aa18.49■□□□□ 0.55
MMP19-205ENST00000547685 CHMP7Q8WUX9 453 aaPredicted RBP18.48■□□□□ 0.55
MMP19-205ENST00000547685 FAM43AQ8N2R8 423 aa18.47■□□□□ 0.55
MMP19-205ENST00000547685 RTN4Q9NQC3 1192 aaKnown RBP18.47■□□□□ 0.55
MMP19-205ENST00000547685 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.47■□□□□ 0.55
MMP19-205ENST00000547685 FMN1Q68DA7 1419 aa18.47■□□□□ 0.55
MMP19-205ENST00000547685 HECW1Q76N89 1606 aa18.46■□□□□ 0.55
MMP19-205ENST00000547685 FGD6Q6ZV73 1430 aa18.46■□□□□ 0.54
MMP19-205ENST00000547685 PCF11O94913 1555 aaKnown RBP18.45■□□□□ 0.54
MMP19-205ENST00000547685 EFCAB5A4FU69 1503 aa18.45■□□□□ 0.54
MMP19-205ENST00000547685 FAM9BQ8IZU0 186 aa18.45■□□□□ 0.54
MMP19-205ENST00000547685 CTTNBP2Q8WZ74 1663 aa18.45■□□□□ 0.54
MMP19-205ENST00000547685 SYNJ2O15056 1496 aa18.44■□□□□ 0.54
MMP19-205ENST00000547685 BACH2Q9BYV9 841 aa18.43■□□□□ 0.54
MMP19-205ENST00000547685 AKNAQ7Z591 1439 aa18.42■□□□□ 0.54
MMP19-205ENST00000547685 CASKIN1Q8WXD9 1431 aa18.42■□□□□ 0.54
MMP19-205ENST00000547685 NAIPQ13075 1403 aa18.4■□□□□ 0.54
MMP19-205ENST00000547685 PDE4AP27815 886 aa18.4■□□□□ 0.54
MMP19-205ENST00000547685 CCDC184Q52MB2 194 aa18.4■□□□□ 0.54
MMP19-205ENST00000547685 ADAMTS12P58397 1594 aa18.4■□□□□ 0.54
MMP19-205ENST00000547685 GCC2Q8IWJ2 1684 aa18.37■□□□□ 0.53
MMP19-205ENST00000547685 PKNOX2Q96KN3 472 aa18.36■□□□□ 0.53
MMP19-205ENST00000547685 ARID4BQ4LE39 1312 aaPredicted RBP18.36■□□□□ 0.53
MMP19-205ENST00000547685 EIF5BO60841 1220 aaKnown RBP18.35■□□□□ 0.53
MMP19-205ENST00000547685 P3H3Q8IVL6 736 aa18.35■□□□□ 0.53
MMP19-205ENST00000547685 FHOD3Q2V2M9 1422 aa18.34■□□□□ 0.53
MMP19-205ENST00000547685 GRIN2AQ12879 1464 aa18.34■□□□□ 0.53
MMP19-205ENST00000547685 LAS1LQ9Y4W2 734 aaKnown RBP18.34■□□□□ 0.53
MMP19-205ENST00000547685 BRPF3Q9ULD4 1205 aa18.33■□□□□ 0.53
MMP19-205ENST00000547685 MIA2Q96PC5 1412 aa18.33■□□□□ 0.53
MMP19-205ENST00000547685 RIMBP3CA6NJZ7 1639 aa18.33■□□□□ 0.52
MMP19-205ENST00000547685 RIMBP3BA6NNM3 1639 aa18.33■□□□□ 0.52
MMP19-205ENST00000547685 RIMBP3Q9UFD9 1639 aa18.33■□□□□ 0.52
MMP19-205ENST00000547685 ARHGEF11O15085 1522 aa18.32■□□□□ 0.52
MMP19-205ENST00000547685 KTN1Q86UP2 1357 aaKnown RBP18.32■□□□□ 0.52
MMP19-205ENST00000547685 SPATA31E1Q6ZUB1 1445 aa18.31■□□□□ 0.52
MMP19-205ENST00000547685 CLASP1Q7Z460 1538 aa18.31■□□□□ 0.52
MMP19-205ENST00000547685 NFKBIBQ15653 356 aa18.3■□□□□ 0.52
MMP19-205ENST00000547685 RRP1P56182 461 aaKnown RBP18.28■□□□□ 0.52
MMP19-205ENST00000547685 PDE3BQ13370 1112 aa18.28■□□□□ 0.52
MMP19-205ENST00000547685 CEP170Q5SW79 1584 aa18.27■□□□□ 0.52
MMP19-205ENST00000547685 NPM2Q86SE8 214 aaKnown RBP18.27■□□□□ 0.52
MMP19-205ENST00000547685 MYOM3Q5VTT5 1437 aa18.26■□□□□ 0.51
MMP19-205ENST00000547685 PTPRKQ15262 1439 aa18.26■□□□□ 0.51
MMP19-205ENST00000547685 SAMD9Q5K651 1589 aa18.26■□□□□ 0.51
MMP19-205ENST00000547685 ROCK2O75116 1388 aaKnown RBP18.26■□□□□ 0.51
MMP19-205ENST00000547685 DAXXQ9UER7 740 aaPredicted RBP18.25■□□□□ 0.51
MMP19-205ENST00000547685 FRAT1Q92837 279 aaPredicted RBP18.25■□□□□ 0.51
MMP19-205ENST00000547685 DHX29Q7Z478 1369 aaKnown RBP18.24■□□□□ 0.51
MMP19-205ENST00000547685 KIF7Q2M1P5 1343 aa18.24■□□□□ 0.51
MMP19-205ENST00000547685 SUPT6HQ7KZ85 1726 aaKnown RBP18.23■□□□□ 0.51
MMP19-205ENST00000547685 LRPPRCP42704 1394 aaKnown RBP18.23■□□□□ 0.51
MMP19-205ENST00000547685 NUP160Q12769 1436 aa18.23■□□□□ 0.51
MMP19-205ENST00000547685 INSRP06213 1382 aa18.22■□□□□ 0.51
MMP19-205ENST00000547685 TCOF1Q13428 1488 aaKnown RBP18.22■□□□□ 0.51
MMP19-205ENST00000547685 RPRD2Q5VT52 1461 aaKnown RBP18.22■□□□□ 0.51
MMP19-205ENST00000547685 LRRIQ1Q96JM4 1722 aa18.21■□□□□ 0.51
MMP19-205ENST00000547685 ZMYM4Q5VZL5 1548 aa18.2■□□□□ 0.5
MMP19-205ENST00000547685 PNISRQ8TF01 805 aaKnown RBP18.2■□□□□ 0.5
MMP19-205ENST00000547685 EHBP1L1Q8N3D4 1523 aa18.2■□□□□ 0.5
MMP19-205ENST00000547685 CYB5RLQ6IPT4 315 aa18.2■□□□□ 0.5
MMP19-205ENST00000547685 DENND4BO75064 1496 aaPredicted RBP18.19■□□□□ 0.5
MMP19-205ENST00000547685 BRD4O60885 1362 aaPredicted RBP18.19■□□□□ 0.5
MMP19-205ENST00000547685 L1TD1Q5T7N2 865 aaKnown RBP18.18■□□□□ 0.5
MMP19-205ENST00000547685 MTUS2Q5JR59 1369 aa18.17■□□□□ 0.5
MMP19-205ENST00000547685 TEX14Q8IWB6 1497 aa18.17■□□□□ 0.5
MMP19-205ENST00000547685 RCAN3Q9UKA8 241 aa18.16■□□□□ 0.5
MMP19-205ENST00000547685 RRP9O43818 475 aaKnown RBP18.15■□□□□ 0.5
MMP19-205ENST00000547685 L3MBTL2Q969R5 705 aa18.15■□□□□ 0.5
MMP19-205ENST00000547685 IQGAP2Q13576 1575 aa18.15■□□□□ 0.5
MMP19-205ENST00000547685 ERCC6L2Q5T890 1561 aa18.14■□□□□ 0.49
MMP19-205ENST00000547685 EXOC6Q8TAG9 804 aa18.14■□□□□ 0.49
MMP19-205ENST00000547685 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
MMP19-205ENST00000547685 UGGT2Q9NYU1 1516 aa18.12■□□□□ 0.49
MMP19-205ENST00000547685 TMC1Q8TDI8 760 aa18.11■□□□□ 0.49
MMP19-205ENST00000547685 KIF15Q9NS87 1388 aa18.1■□□□□ 0.49
MMP19-205ENST00000547685 RALBP1Q15311 655 aa18.1■□□□□ 0.49
MMP19-205ENST00000547685 ANKRD30BQ9BXX2 1392 aa18.1■□□□□ 0.49
MMP19-205ENST00000547685 MPHOSPH9Q99550 1183 aa18.1■□□□□ 0.49
MMP19-205ENST00000547685 SHROOM2Q13796 1616 aa18.09■□□□□ 0.49
MMP19-205ENST00000547685 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
MMP19-205ENST00000547685 FAM161AQ3B820 660 aa18.07■□□□□ 0.48
MMP19-205ENST00000547685 JPH4Q96JJ6 628 aa18.07■□□□□ 0.48
MMP19-205ENST00000547685 PRG4Q92954 1404 aaPredicted RBP18.06■□□□□ 0.48
MMP19-205ENST00000547685 MYBBP1AQ9BQG0 1328 aaKnown RBP18.06■□□□□ 0.48
MMP19-205ENST00000547685 ROCK1Q13464 1354 aa18.06■□□□□ 0.48
MMP19-205ENST00000547685 CENPQQ7L2Z9 268 aaPredicted RBP18.05■□□□□ 0.48
MMP19-205ENST00000547685 KIF14Q15058 1648 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms