RNA–Protein interactions for RNA: ENST00000546318.2

IFIT1-202, Transcript of interferon induced protein with tetratricopeptide repeats 1, humanhuman

TSL 3 BASIC

Gene IFIT1, Length 4,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFIT1-202ENST00000546318 SCAF1Q9H7N4 1312 aaKnown RBP9.37□□□□□ -0.91
IFIT1-202ENST00000546318 ABCC5O15440 1437 aa9.37□□□□□ -0.91
IFIT1-202ENST00000546318 TRIM52Q96A61 297 aa9.36□□□□□ -0.91
IFIT1-202ENST00000546318 SHROOM2Q13796 1616 aa9.36□□□□□ -0.91
IFIT1-202ENST00000546318 GPATCH8Q9UKJ3 1502 aaKnown RBP9.36□□□□□ -0.91
IFIT1-202ENST00000546318 YTHDC1Q96MU7 727 aaKnown RBP9.35□□□□□ -0.91
IFIT1-202ENST00000546318 CFDP1Q9UEE9 299 aaPredicted RBP9.35□□□□□ -0.91
IFIT1-202ENST00000546318 PPP1R15AO75807 674 aaPredicted RBP9.35□□□□□ -0.91
IFIT1-202ENST00000546318 KDM6BO15054 1643 aa9.35□□□□□ -0.91
IFIT1-202ENST00000546318 PLEKHD1A6NEE1 506 aa9.35□□□□□ -0.91
IFIT1-202ENST00000546318 ADGRL2O95490 1459 aa9.34□□□□□ -0.91
IFIT1-202ENST00000546318 SHANK2Q9UPX8 1470 aa9.34□□□□□ -0.91
IFIT1-202ENST00000546318 CDC42BPAQ5VT25 1732 aa9.34□□□□□ -0.91
IFIT1-202ENST00000546318 PTPRGP23470 1445 aa9.34□□□□□ -0.91
IFIT1-202ENST00000546318 ATP10BO94823 1461 aa9.33□□□□□ -0.92
IFIT1-202ENST00000546318 ABCC10Q5T3U5 1492 aa9.32□□□□□ -0.92
IFIT1-202ENST00000546318 ANKRD30AQ9BXX3 1397 aa9.32□□□□□ -0.92
IFIT1-202ENST00000546318 MPHOSPH9Q99550 1183 aa9.31□□□□□ -0.92
IFIT1-202ENST00000546318 ARHGEF5Q12774 1597 aa9.3□□□□□ -0.92
IFIT1-202ENST00000546318 PREX2Q70Z35 1606 aa9.3□□□□□ -0.92
IFIT1-202ENST00000546318 ZNF644Q9H582 1327 aaPredicted RBP9.3□□□□□ -0.92
IFIT1-202ENST00000546318 ZNF777Q9ULD5 760 aaPredicted RBP9.29□□□□□ -0.92
IFIT1-202ENST00000546318 DENND4BO75064 1496 aaPredicted RBP9.29□□□□□ -0.92
IFIT1-202ENST00000546318 NCOA1Q15788 1441 aa9.28□□□□□ -0.92
IFIT1-202ENST00000546318 ABCC2Q92887 1545 aa9.28□□□□□ -0.92
IFIT1-202ENST00000546318 KDM5BQ9UGL1 1544 aa9.28□□□□□ -0.92
IFIT1-202ENST00000546318 GTF3C3Q9Y5Q9 886 aa9.28□□□□□ -0.92
IFIT1-202ENST00000546318 C9orf84Q5VXU9 1444 aa9.27□□□□□ -0.92
IFIT1-202ENST00000546318 RPRD2Q5VT52 1461 aaKnown RBP9.27□□□□□ -0.93
IFIT1-202ENST00000546318 CLASP1Q7Z460 1538 aa9.27□□□□□ -0.93
IFIT1-202ENST00000546318 SLC4A1APQ9BWU0 796 aaKnown RBP9.26□□□□□ -0.93
IFIT1-202ENST00000546318 ANKRD30BQ9BXX2 1392 aa9.26□□□□□ -0.93
IFIT1-202ENST00000546318 ANKRD50Q9ULJ7 1429 aa9.25□□□□□ -0.93
IFIT1-202ENST00000546318 PZPP20742 1482 aa9.25□□□□□ -0.93
IFIT1-202ENST00000546318 CCDC141Q6ZP82 1450 aa9.25□□□□□ -0.93
IFIT1-202ENST00000546318 KDM5DQ9BY66 1539 aa9.25□□□□□ -0.93
IFIT1-202ENST00000546318 MYO5CQ9NQX4 1742 aa9.25□□□□□ -0.93
IFIT1-202ENST00000546318 SAMD9LQ8IVG5 1584 aa9.25□□□□□ -0.93
IFIT1-202ENST00000546318 PLEKHH2Q8IVE3 1493 aa9.25□□□□□ -0.93
IFIT1-202ENST00000546318 CDC42BPBQ9Y5S2 1711 aa9.24□□□□□ -0.93
IFIT1-202ENST00000546318 KIAA1107Q9UPP5 1409 aa9.24□□□□□ -0.93
IFIT1-202ENST00000546318 DDX10Q13206 875 aaKnown RBP9.24□□□□□ -0.93
IFIT1-202ENST00000546318 ARHGAP5Q13017 1502 aa9.24□□□□□ -0.93
IFIT1-202ENST00000546318 TEX14Q8IWB6 1497 aa9.24□□□□□ -0.93
IFIT1-202ENST00000546318 TSPY4P0CV99 314 aa9.24□□□□□ -0.93
IFIT1-202ENST00000546318 TSPY10P0CW01 314 aa9.24□□□□□ -0.93
IFIT1-202ENST00000546318 UHRF1BP1LA0JNW5 1464 aa9.23□□□□□ -0.93
IFIT1-202ENST00000546318 RSPH4AQ5TD94 716 aa9.23□□□□□ -0.93
IFIT1-202ENST00000546318 MAST1Q9Y2H9 1570 aa9.23□□□□□ -0.93
IFIT1-202ENST00000546318 TTC37Q6PGP7 1564 aa9.23□□□□□ -0.93
IFIT1-202ENST00000546318 ANP32CO43423 234 aa9.23□□□□□ -0.93
IFIT1-202ENST00000546318 ZCCHC11Q5TAX3 1644 aaKnown RBP9.22□□□□□ -0.93
IFIT1-202ENST00000546318 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.21□□□□□ -0.93
IFIT1-202ENST00000546318 EIF4G2P78344 907 aaKnown RBP eCLIP9.21□□□□□ -0.94
IFIT1-202ENST00000546318 ERCC6L2Q5T890 1561 aa9.21□□□□□ -0.94
IFIT1-202ENST00000546318 KIF15Q9NS87 1388 aa9.21□□□□□ -0.94
IFIT1-202ENST00000546318 CCER2I3L3R5 266 aa9.2□□□□□ -0.94
IFIT1-202ENST00000546318 SYCP2Q9BX26 1530 aa9.2□□□□□ -0.94
IFIT1-202ENST00000546318 FOXD1Q16676 465 aa9.2□□□□□ -0.94
IFIT1-202ENST00000546318 PLXNC1O60486 1568 aa9.2□□□□□ -0.94
IFIT1-202ENST00000546318 MBD5Q9P267 1494 aa9.2□□□□□ -0.94
IFIT1-202ENST00000546318 L3MBTL2Q969R5 705 aa9.2□□□□□ -0.94
IFIT1-202ENST00000546318 POLR1AO95602 1720 aaPredicted RBP9.19□□□□□ -0.94
IFIT1-202ENST00000546318 HSPA5P11021 654 aaKnown RBP9.19□□□□□ -0.94
IFIT1-202ENST00000546318 HIRIP3Q9BW71 556 aaPredicted RBP9.18□□□□□ -0.94
IFIT1-202ENST00000546318 NUP155O75694 1391 aa9.18□□□□□ -0.94
IFIT1-202ENST00000546318 UNC13BO14795 1591 aa9.18□□□□□ -0.94
IFIT1-202ENST00000546318 ARHGEF12Q9NZN5 1544 aa9.18□□□□□ -0.94
IFIT1-202ENST00000546318 HNRNPMP52272 730 aaKnown RBP eCLIP9.17□□□□□ -0.94
IFIT1-202ENST00000546318 PKD2Q13563 968 aa9.17□□□□□ -0.94
IFIT1-202ENST00000546318 PELP1Q8IZL8 1130 aaKnown RBP9.17□□□□□ -0.94
IFIT1-202ENST00000546318 ARAP3Q8WWN8 1544 aa9.16□□□□□ -0.94
IFIT1-202ENST00000546318 FAM135AQ9P2D6 1515 aa9.16□□□□□ -0.94
IFIT1-202ENST00000546318 DUOX2Q9NRD8 1548 aa9.16□□□□□ -0.94
IFIT1-202ENST00000546318 PLCH2O75038 1416 aa9.15□□□□□ -0.94
IFIT1-202ENST00000546318 CNTLNQ9NXG0 1405 aa9.15□□□□□ -0.94
IFIT1-202ENST00000546318 ERBINQ96RT1 1412 aa9.15□□□□□ -0.95
IFIT1-202ENST00000546318 ABCC1P33527 1531 aa9.15□□□□□ -0.95
IFIT1-202ENST00000546318 IQGAP3Q86VI3 1631 aa9.14□□□□□ -0.95
IFIT1-202ENST00000546318 UHRF1BP1Q6BDS2 1440 aa9.13□□□□□ -0.95
IFIT1-202ENST00000546318 RALGAPBQ86X10 1494 aa9.13□□□□□ -0.95
IFIT1-202ENST00000546318 WASHC2AQ641Q2 1341 aa9.13□□□□□ -0.95
IFIT1-202ENST00000546318 CCDC7Q96M83 1385 aa9.12□□□□□ -0.95
IFIT1-202ENST00000546318 WDR7Q9Y4E6 1490 aa9.12□□□□□ -0.95
IFIT1-202ENST00000546318 EFCAB2Q5VUJ9 269 aa9.12□□□□□ -0.95
IFIT1-202ENST00000546318 NBPF8Q3BBV2 869 aa9.11□□□□□ -0.95
IFIT1-202ENST00000546318 KCNH8Q96L42 1107 aa9.11□□□□□ -0.95
IFIT1-202ENST00000546318 KDM5CP41229 1560 aa9.11□□□□□ -0.95
IFIT1-202ENST00000546318 MAGI2Q86UL8 1455 aa9.11□□□□□ -0.95
IFIT1-202ENST00000546318 SPATA31E1Q6ZUB1 1445 aa9.1□□□□□ -0.95
IFIT1-202ENST00000546318 CCDC144AA2RUR9 1427 aa9.1□□□□□ -0.95
IFIT1-202ENST00000546318 USP47Q96K76 1375 aa9.1□□□□□ -0.95
IFIT1-202ENST00000546318 ARID4BQ4LE39 1312 aaPredicted RBP9.09□□□□□ -0.95
IFIT1-202ENST00000546318 ABCA9Q8IUA7 1624 aa9.09□□□□□ -0.95
IFIT1-202ENST00000546318 RTEL1-TNFRSF6BF6WH68 1400 aa9.09□□□□□ -0.95
IFIT1-202ENST00000546318 MYT1Q01538 1121 aa9.09□□□□□ -0.95
IFIT1-202ENST00000546318 ZNF326Q5BKZ1 582 aaKnown RBP9.08□□□□□ -0.96
IFIT1-202ENST00000546318 EIF2AK4Q9P2K8 1649 aaKnown RBP9.08□□□□□ -0.96
IFIT1-202ENST00000546318 ZFYVE16Q7Z3T8 1539 aa9.08□□□□□ -0.96
IFIT1-202ENST00000546318 ROCK2O75116 1388 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms