RNA–Protein interactions for RNA: ENST00000546310.1

PHOX2A-203, Transcript of paired like homeobox 2A, humanhuman

TSL 5

Gene PHOX2A, Length 928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-203ENST00000546310 SCAPERQ9BY12 1400 aa42.03■■■■■ 4.32
PHOX2A-203ENST00000546310 CDK13Q14004 1512 aaKnown RBP42.02■■■■■ 4.32
PHOX2A-203ENST00000546310 PLCH2O75038 1416 aa42■■■■■ 4.31
PHOX2A-203ENST00000546310 ARHGEF12Q9NZN5 1544 aa41.95■■■■■ 4.31
PHOX2A-203ENST00000546310 ATP10AO60312 1499 aa41.94■■■■■ 4.3
PHOX2A-203ENST00000546310 C9orf84Q5VXU9 1444 aa41.91■■■■■ 4.3
PHOX2A-203ENST00000546310 PREX1Q8TCU6 1659 aa41.87■■■■■ 4.29
PHOX2A-203ENST00000546310 EFCAB2Q5VUJ9 269 aa41.84■■■■■ 4.29
PHOX2A-203ENST00000546310 CEBPAP49715 358 aaPredicted RBP41.81■■■■■ 4.28
PHOX2A-203ENST00000546310 MYO5CQ9NQX4 1742 aa41.81■■■■■ 4.28
PHOX2A-203ENST00000546310 ATP1B4Q9UN42 357 aaPredicted RBP41.75■■■■■ 4.27
PHOX2A-203ENST00000546310 ZNF518AQ6AHZ1 1483 aa41.73■■■■■ 4.27
PHOX2A-203ENST00000546310 DMRT2Q9Y5R5 561 aa41.73■■■■■ 4.27
PHOX2A-203ENST00000546310 FMN1Q68DA7 1419 aa41.71■■■■■ 4.27
PHOX2A-203ENST00000546310 CDK11AQ9UQ88 783 aaPredicted RBP41.71■■■■■ 4.27
PHOX2A-203ENST00000546310 STRCQ7RTU9 1775 aa41.69■■■■■ 4.26
PHOX2A-203ENST00000546310 KIF14Q15058 1648 aa41.69■■■■■ 4.26
PHOX2A-203ENST00000546310 UHRF1BP1Q6BDS2 1440 aa41.69■■■■■ 4.26
PHOX2A-203ENST00000546310 KDM5CP41229 1560 aa41.67■■■■■ 4.26
PHOX2A-203ENST00000546310 AFAP1Q8N556 730 aa41.65■■■■■ 4.26
PHOX2A-203ENST00000546310 ARHGAP5Q13017 1502 aa41.64■■■■■ 4.26
PHOX2A-203ENST00000546310 DISP3Q9P2K9 1392 aa41.63■■■■■ 4.25
PHOX2A-203ENST00000546310 TROQ12816 1431 aaPredicted RBP41.61■■■■■ 4.25
PHOX2A-203ENST00000546310 DIP2CQ9Y2E4 1556 aa41.6■■■■■ 4.25
PHOX2A-203ENST00000546310 MYT1LQ9UL68 1186 aa41.6■■■■■ 4.25
PHOX2A-203ENST00000546310 ARHGAP35Q9NRY4 1499 aa41.57■■■■■ 4.25
PHOX2A-203ENST00000546310 REREQ9P2R6 1566 aa41.57■■■■■ 4.25
PHOX2A-203ENST00000546310 SETD1BQ9UPS6 1966 aaKnown RBP41.57■■■■■ 4.24
PHOX2A-203ENST00000546310 CLIP1P30622 1438 aa41.55■■■■■ 4.24
PHOX2A-203ENST00000546310 UBTFP17480 764 aaKnown RBP41.55■■■■■ 4.24
PHOX2A-203ENST00000546310 ILDR2Q71H61 639 aa41.55■■■■■ 4.24
PHOX2A-203ENST00000546310 EHMT2Q96KQ7 1210 aa41.52■■■■■ 4.24
PHOX2A-203ENST00000546310 PTPRTO14522 1441 aa41.51■■■■■ 4.24
PHOX2A-203ENST00000546310 ABCA6Q8N139 1617 aa41.5■■■■■ 4.23
PHOX2A-203ENST00000546310 MLH3Q9UHC1 1453 aa41.49■■■■■ 4.23
PHOX2A-203ENST00000546310 C3P01024 1663 aa41.49■■■■■ 4.23
PHOX2A-203ENST00000546310 AGLP35573 1532 aa41.44■■■■■ 4.23
PHOX2A-203ENST00000546310 SOCS7O14512 581 aa41.44■■■■■ 4.22
PHOX2A-203ENST00000546310 ESF1Q9H501 851 aaKnown RBP41.44■■■■■ 4.22
PHOX2A-203ENST00000546310 CDC42BPBQ9Y5S2 1711 aa41.43■■■■■ 4.22
PHOX2A-203ENST00000546310 LRRIQ1Q96JM4 1722 aa41.4■■■■■ 4.22
PHOX2A-203ENST00000546310 TRAPPC8Q9Y2L5 1435 aa41.39■■■■■ 4.22
PHOX2A-203ENST00000546310 ABCC1P33527 1531 aa41.38■■■■■ 4.21
PHOX2A-203ENST00000546310 PREX2Q70Z35 1606 aa41.36■■■■■ 4.21
PHOX2A-203ENST00000546310 SPATA31D1Q6ZQQ2 1576 aa41.34■■■■■ 4.21
PHOX2A-203ENST00000546310 LTBP4Q8N2S1 1624 aa41.34■■■■■ 4.21
PHOX2A-203ENST00000546310 ITSN2Q9NZM3 1697 aa41.32■■■■■ 4.2
PHOX2A-203ENST00000546310 CNTLNQ9NXG0 1405 aa41.31■■■■■ 4.2
PHOX2A-203ENST00000546310 NCOA1Q15788 1441 aa41.3■■■■■ 4.2
PHOX2A-203ENST00000546310 IQSEC2Q5JU85 1478 aa41.28■■■■■ 4.2
PHOX2A-203ENST00000546310 KIDINS220Q9ULH0 1771 aa41.27■■■■■ 4.2
PHOX2A-203ENST00000546310 CCDC18Q5T9S5 1454 aa41.21■■■■■ 4.19
PHOX2A-203ENST00000546310 NPATQ14207 1427 aa41.18■■■■■ 4.18
PHOX2A-203ENST00000546310 CASKIN1Q8WXD9 1431 aa41.17■■■■■ 4.18
PHOX2A-203ENST00000546310 CAMSAP1Q5T5Y3 1602 aa41.16■■■■■ 4.18
PHOX2A-203ENST00000546310 CDC42BPAQ5VT25 1732 aa41.15■■■■■ 4.18
PHOX2A-203ENST00000546310 MROH2AA6NES4 1674 aa41.14■■■■■ 4.18
PHOX2A-203ENST00000546310 SAMD9LQ8IVG5 1584 aa41.13■■■■■ 4.18
PHOX2A-203ENST00000546310 ZMYM3Q14202 1370 aa41.1■■■■■ 4.17
PHOX2A-203ENST00000546310 ZNF777Q9ULD5 760 aaPredicted RBP41.07■■■■■ 4.17
PHOX2A-203ENST00000546310 SPAG9O60271 1321 aaKnown RBP41.04■■■■■ 4.16
PHOX2A-203ENST00000546310 NCKAP5LQ9HCH0 1330 aa41.04■■■■■ 4.16
PHOX2A-203ENST00000546310 SYCP2Q9BX26 1530 aa41.03■■■■■ 4.16
PHOX2A-203ENST00000546310 SUPT6HQ7KZ85 1726 aaKnown RBP41.01■■■■■ 4.16
PHOX2A-203ENST00000546310 ZNF335Q9H4Z2 1342 aaPredicted RBP41■■■■■ 4.15
PHOX2A-203ENST00000546310 GPATCH8Q9UKJ3 1502 aaKnown RBP40.97■■■■■ 4.15
PHOX2A-203ENST00000546310 HNRNPMP52272 730 aaKnown RBP eCLIP40.96■■■■■ 4.15
PHOX2A-203ENST00000546310 CLTCQ00610 1675 aaKnown RBP40.96■■■■■ 4.15
PHOX2A-203ENST00000546310 FYCO1Q9BQS8 1478 aa40.96■■■■■ 4.15
PHOX2A-203ENST00000546310 ATP7AQ04656 1500 aa40.95■■■■■ 4.15
PHOX2A-203ENST00000546310 MYO3AQ8NEV4 1616 aa40.95■■■■■ 4.15
PHOX2A-203ENST00000546310 PLA2R1Q13018 1463 aa40.95■■■■■ 4.15
PHOX2A-203ENST00000546310 ZNF142P52746 1687 aaPredicted RBP40.94■■■■■ 4.15
PHOX2A-203ENST00000546310 UBAP1LF5GYI3 381 aa40.94■■■■■ 4.14
PHOX2A-203ENST00000546310 PKD2Q13563 968 aa40.93■■■■■ 4.14
PHOX2A-203ENST00000546310 PLXNC1O60486 1568 aa40.93■■■■■ 4.14
PHOX2A-203ENST00000546310 A2MP01023 1474 aa40.9■■■■■ 4.14
PHOX2A-203ENST00000546310 PTPRKQ15262 1439 aa40.9■■■■■ 4.14
PHOX2A-203ENST00000546310 CEP170BQ9Y4F5 1589 aaPredicted RBP40.9■■■■■ 4.14
PHOX2A-203ENST00000546310 KIAA1107Q9UPP5 1409 aa40.89■■■■■ 4.14
PHOX2A-203ENST00000546310 INO80Q9ULG1 1556 aaPredicted RBP40.89■■■■■ 4.14
PHOX2A-203ENST00000546310 TCOF1Q13428 1488 aaKnown RBP40.89■■■■■ 4.14
PHOX2A-203ENST00000546310 CHIC1Q5VXU3 224 aa40.87■■■■■ 4.13
PHOX2A-203ENST00000546310 PLEKHH2Q8IVE3 1493 aa40.87■■■■■ 4.13
PHOX2A-203ENST00000546310 GGT6Q6P531 493 aa40.84■■■■■ 4.13
PHOX2A-203ENST00000546310 CFDP1Q9UEE9 299 aaPredicted RBP40.83■■■■■ 4.13
PHOX2A-203ENST00000546310 PPP6R1Q9UPN7 881 aa40.78■■■■■ 4.12
PHOX2A-203ENST00000546310 CCNB3Q8WWL7 1395 aa40.76■■■■■ 4.12
PHOX2A-203ENST00000546310 ADGBQ8N7X0 1667 aa40.72■■■■■ 4.11
PHOX2A-203ENST00000546310 A2ML1A8K2U0 1454 aa40.7■■■■■ 4.11
PHOX2A-203ENST00000546310 DNMT1P26358 1616 aaKnown RBP40.66■■■■■ 4.1
PHOX2A-203ENST00000546310 MTUS2Q5JR59 1369 aa40.62■■■■■ 4.09
PHOX2A-203ENST00000546310 ZNF644Q9H582 1327 aaPredicted RBP40.59■■■■■ 4.09
PHOX2A-203ENST00000546310 SCAF1Q9H7N4 1312 aaKnown RBP40.58■■■■■ 4.09
PHOX2A-203ENST00000546310 MBD5Q9P267 1494 aa40.57■■■■■ 4.08
PHOX2A-203ENST00000546310 HSPA1LP34931 641 aa40.56■■■■■ 4.08
PHOX2A-203ENST00000546310 RTEL1-TNFRSF6BF6WH68 1400 aa40.55■■■■■ 4.08
PHOX2A-203ENST00000546310 CPS1P31327 1500 aa40.55■■■■■ 4.08
PHOX2A-203ENST00000546310 POLR1AO95602 1720 aaPredicted RBP40.54■■■■■ 4.08
PHOX2A-203ENST00000546310 TIAM1Q13009 1591 aa40.54■■■■■ 4.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms