RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 RIOK3O14730 519 aaKnown RBP10.81□□□□□ -0.68
PRKDC-211ENST00000546304 RNF25Q96BH1 459 aaPredicted RBP10.81□□□□□ -0.68
PRKDC-211ENST00000546304 ZNF608Q9ULD9 1512 aaPredicted RBP10.8□□□□□ -0.68
PRKDC-211ENST00000546304 SOGA1O94964 1423 aa10.8□□□□□ -0.68
PRKDC-211ENST00000546304 PBRM1Q86U86 1689 aa10.79□□□□□ -0.68
PRKDC-211ENST00000546304 ECM2O94769 699 aaPredicted RBP10.79□□□□□ -0.68
PRKDC-211ENST00000546304 LHX8Q68G74 356 aa10.79□□□□□ -0.68
PRKDC-211ENST00000546304 VGFO15240 615 aaPredicted RBP10.74□□□□□ -0.69
PRKDC-211ENST00000546304 POTEFA5A3E0 1075 aa10.73□□□□□ -0.69
PRKDC-211ENST00000546304 TAOK2Q9UL54 1235 aa10.73□□□□□ -0.69
PRKDC-211ENST00000546304 AQRO60306 1485 aaKnown RBP eCLIP10.73□□□□□ -0.692e-6■■■■□ 21.1
PRKDC-211ENST00000546304 GAPVD1Q14C86 1478 aa10.73□□□□□ -0.69
PRKDC-211ENST00000546304 TDRD9Q8NDG6 1382 aaKnown RBP10.72□□□□□ -0.69
PRKDC-211ENST00000546304 POTEB2H3BUK9 544 aa10.71□□□□□ -0.69
PRKDC-211ENST00000546304 SEC24BO95487 1268 aa10.71□□□□□ -0.69
PRKDC-211ENST00000546304 GRIN2BQ13224 1484 aa10.71□□□□□ -0.69
PRKDC-211ENST00000546304 COLQQ9Y215 455 aaPredicted RBP10.71□□□□□ -0.69
PRKDC-211ENST00000546304 ADAMTS12P58397 1594 aa10.7□□□□□ -0.7
PRKDC-211ENST00000546304 RGL2O15211 777 aa10.7□□□□□ -0.7
PRKDC-211ENST00000546304 IRX5P78411 483 aaPredicted RBP10.7□□□□□ -0.7
PRKDC-211ENST00000546304 GOLGA2Q08379 1002 aa10.7□□□□□ -0.7
PRKDC-211ENST00000546304 ERICH3Q5RHP9 1530 aa10.69□□□□□ -0.7
PRKDC-211ENST00000546304 SNAPC4Q5SXM2 1469 aa10.69□□□□□ -0.7
PRKDC-211ENST00000546304 KIF27Q86VH2 1401 aa10.69□□□□□ -0.7
PRKDC-211ENST00000546304 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.69□□□□□ -0.7
PRKDC-211ENST00000546304 ZFP91Q96JP5 570 aaPredicted RBP10.69□□□□□ -0.7
PRKDC-211ENST00000546304 CHD1O14646 1710 aa10.69□□□□□ -0.7
PRKDC-211ENST00000546304 MAGI1Q96QZ7 1491 aaPredicted RBP10.68□□□□□ -0.7
PRKDC-211ENST00000546304 MKRN3Q13064 507 aaKnown RBP10.68□□□□□ -0.7
PRKDC-211ENST00000546304 CUL7Q14999 1698 aa10.68□□□□□ -0.7
PRKDC-211ENST00000546304 CABP2Q9NPB3 220 aa10.67□□□□□ -0.7
PRKDC-211ENST00000546304 PLCG2P16885 1265 aa10.66□□□□□ -0.7
PRKDC-211ENST00000546304 OCEL1Q9H607 264 aa10.66□□□□□ -0.7
PRKDC-211ENST00000546304 POTEJP0CG39 1038 aa10.64□□□□□ -0.71
PRKDC-211ENST00000546304 ILDR1Q86SU0 546 aaPredicted RBP10.64□□□□□ -0.71
PRKDC-211ENST00000546304 SYNJ2O15056 1496 aa10.63□□□□□ -0.71
PRKDC-211ENST00000546304 RUSC2Q8N2Y8 1516 aa10.62□□□□□ -0.71
PRKDC-211ENST00000546304 EEA1Q15075 1411 aa10.61□□□□□ -0.71
PRKDC-211ENST00000546304 MAMSTRQ6ZN01 415 aa10.61□□□□□ -0.71
PRKDC-211ENST00000546304 PDCD7Q8N8D1 485 aaKnown RBP10.61□□□□□ -0.71
PRKDC-211ENST00000546304 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.61□□□□□ -0.718e-12■■■□□ 17.5
PRKDC-211ENST00000546304 FHAD1B1AJZ9 1412 aa10.6□□□□□ -0.71
PRKDC-211ENST00000546304 OTUD5Q96G74 571 aa10.6□□□□□ -0.71
PRKDC-211ENST00000546304 BCL11BQ9C0K0 894 aaPredicted RBP10.6□□□□□ -0.71
PRKDC-211ENST00000546304 EFCAB3Q8N7B9 438 aa10.59□□□□□ -0.71
PRKDC-211ENST00000546304 GRIN2AQ12879 1464 aa10.59□□□□□ -0.71
PRKDC-211ENST00000546304 STK25O00506 426 aa10.58□□□□□ -0.72
PRKDC-211ENST00000546304 IGF1RP08069 1367 aa10.57□□□□□ -0.72
PRKDC-211ENST00000546304 SOX12O15370 315 aa10.57□□□□□ -0.72
PRKDC-211ENST00000546304 STK24Q9Y6E0 443 aa10.57□□□□□ -0.72
PRKDC-211ENST00000546304 SCUBE2Q9NQ36 999 aa10.55□□□□□ -0.72
PRKDC-211ENST00000546304 CEP170Q5SW79 1584 aa10.55□□□□□ -0.72
PRKDC-211ENST00000546304 KIF21BO75037 1637 aa10.55□□□□□ -0.72
PRKDC-211ENST00000546304 AMER1Q5JTC6 1135 aaPredicted RBP10.54□□□□□ -0.72
PRKDC-211ENST00000546304 PRXQ9BXM0 1461 aa10.54□□□□□ -0.72
PRKDC-211ENST00000546304 CLASP1Q7Z460 1538 aa10.53□□□□□ -0.72
PRKDC-211ENST00000546304 CARMIL1Q5VZK9 1371 aa10.53□□□□□ -0.72
PRKDC-211ENST00000546304 NUP160Q12769 1436 aa10.53□□□□□ -0.72
PRKDC-211ENST00000546304 HS6ST3Q8IZP7 471 aa10.53□□□□□ -0.72
PRKDC-211ENST00000546304 RAPGEF2Q9Y4G8 1499 aa10.53□□□□□ -0.72
PRKDC-211ENST00000546304 CTTNBP2Q8WZ74 1663 aa10.53□□□□□ -0.72
PRKDC-211ENST00000546304 L3MBTL3Q96JM7 780 aaPredicted RBP10.52□□□□□ -0.73
PRKDC-211ENST00000546304 CHMP7Q8WUX9 453 aaPredicted RBP10.51□□□□□ -0.73
PRKDC-211ENST00000546304 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
PRKDC-211ENST00000546304 NLRP6P59044 892 aa10.48□□□□□ -0.73
PRKDC-211ENST00000546304 PHF8Q9UPP1 1060 aa10.48□□□□□ -0.73
PRKDC-211ENST00000546304 IQGAP2Q13576 1575 aa10.48□□□□□ -0.73
PRKDC-211ENST00000546304 SHROOM2Q13796 1616 aa10.47□□□□□ -0.73
PRKDC-211ENST00000546304 FAM9AQ8IZU1 332 aaPredicted RBP10.47□□□□□ -0.73
PRKDC-211ENST00000546304 FBXO22Q8NEZ5 403 aa10.47□□□□□ -0.73
PRKDC-211ENST00000546304 MS4A4AQ96JQ5 239 aa10.47□□□□□ -0.73
PRKDC-211ENST00000546304 DNAJC5Q9H3Z4 198 aa10.47□□□□□ -0.73
PRKDC-211ENST00000546304 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
PRKDC-211ENST00000546304 CHGAP10645 457 aaKnown RBP10.46□□□□□ -0.73
PRKDC-211ENST00000546304 MFRPQ9BY79 579 aa10.46□□□□□ -0.73
PRKDC-211ENST00000546304 GOLGA3Q08378 1498 aa10.46□□□□□ -0.74
PRKDC-211ENST00000546304 KIAA0586Q9BVV6 1533 aa10.44□□□□□ -0.74
PRKDC-211ENST00000546304 BOLA1Q9Y3E2 137 aa10.44□□□□□ -0.74
PRKDC-211ENST00000546304 TMEM121BQ9BXQ6 578 aaPredicted RBP10.43□□□□□ -0.74
PRKDC-211ENST00000546304 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.43□□□□□ -0.74
PRKDC-211ENST00000546304 RIMBP3CA6NJZ7 1639 aa10.41□□□□□ -0.74
PRKDC-211ENST00000546304 RIMBP3BA6NNM3 1639 aa10.41□□□□□ -0.74
PRKDC-211ENST00000546304 RIMBP3Q9UFD9 1639 aa10.41□□□□□ -0.74
PRKDC-211ENST00000546304 G3V3G9 751 aa10.41□□□□□ -0.74
PRKDC-211ENST00000546304 C3orf67Q6ZVT6 689 aa10.41□□□□□ -0.74
PRKDC-211ENST00000546304 ARHGEF11O15085 1522 aa10.41□□□□□ -0.74
PRKDC-211ENST00000546304 SLAIN1Q8ND83 568 aa10.4□□□□□ -0.74
PRKDC-211ENST00000546304 UGGT2Q9NYU1 1516 aa10.39□□□□□ -0.75
PRKDC-211ENST00000546304 ERCC6L2Q5T890 1561 aa10.39□□□□□ -0.75
PRKDC-211ENST00000546304 KIAA0556O60303 1618 aa10.37□□□□□ -0.75
PRKDC-211ENST00000546304 MICALL2Q8IY33 904 aa10.37□□□□□ -0.75
PRKDC-211ENST00000546304 SAMD9Q5K651 1589 aa10.36□□□□□ -0.75
PRKDC-211ENST00000546304 NKX1-1Q15270 411 aaPredicted RBP10.35□□□□□ -0.75
PRKDC-211ENST00000546304 PRG4Q92954 1404 aaPredicted RBP10.34□□□□□ -0.75
PRKDC-211ENST00000546304 EFCAB5A4FU69 1503 aa10.34□□□□□ -0.75
PRKDC-211ENST00000546304 DISP1Q96F81 1524 aa10.34□□□□□ -0.75
PRKDC-211ENST00000546304 ARAP1Q96P48 1450 aa10.34□□□□□ -0.75
PRKDC-211ENST00000546304 RYDENQ9NUL5 291 aaKnown RBP10.32□□□□□ -0.76
PRKDC-211ENST00000546304 CARMIL2Q6F5E8 1435 aa10.32□□□□□ -0.76
PRKDC-211ENST00000546304 JPH4Q96JJ6 628 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms