RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 PPARGC1BQ86YN6 1023 aaKnown RBP10.83□□□□□ -0.68
SPPL3-209ENST00000545209 PCDHB13Q9Y5F0 798 aa10.82□□□□□ -0.68
SPPL3-209ENST00000545209 ARHGAP35Q9NRY4 1499 aa10.81□□□□□ -0.68
SPPL3-209ENST00000545209 THOC2Q8NI27 1593 aaKnown RBP10.81□□□□□ -0.68
SPPL3-209ENST00000545209 GRIN2BQ13224 1484 aa10.81□□□□□ -0.68
SPPL3-209ENST00000545209 PBRM1Q86U86 1689 aa10.79□□□□□ -0.68
SPPL3-209ENST00000545209 FHAD1B1AJZ9 1412 aa10.79□□□□□ -0.68
SPPL3-209ENST00000545209 HRCP23327 699 aa10.79□□□□□ -0.68
SPPL3-209ENST00000545209 CTTNBP2Q8WZ74 1663 aa10.79□□□□□ -0.68
SPPL3-209ENST00000545209 EFCAB5A4FU69 1503 aa10.79□□□□□ -0.68
SPPL3-209ENST00000545209 DCBLD2Q96PD2 775 aa10.78□□□□□ -0.68
SPPL3-209ENST00000545209 AQRO60306 1485 aaKnown RBP eCLIP10.78□□□□□ -0.68
SPPL3-209ENST00000545209 IFNL1Q8IU54 200 aa10.77□□□□□ -0.69
SPPL3-209ENST00000545209 ADAMTS12P58397 1594 aa10.77□□□□□ -0.69
SPPL3-209ENST00000545209 TTBK1Q5TCY1 1321 aaPredicted RBP10.76□□□□□ -0.69
SPPL3-209ENST00000545209 PCDHB8Q9UN66 801 aa10.74□□□□□ -0.69
SPPL3-209ENST00000545209 ZNF608Q9ULD9 1512 aaPredicted RBP10.74□□□□□ -0.69
SPPL3-209ENST00000545209 POTEIP0CG38 1075 aa10.73□□□□□ -0.69
SPPL3-209ENST00000545209 PKD2Q13563 968 aa10.73□□□□□ -0.69
SPPL3-209ENST00000545209 ZNF467Q7Z7K2 595 aaPredicted RBP10.73□□□□□ -0.69
SPPL3-209ENST00000545209 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
SPPL3-209ENST00000545209 TRPC6Q9Y210 931 aa10.72□□□□□ -0.69
SPPL3-209ENST00000545209 MAP3K1Q13233 1512 aa10.7□□□□□ -0.7
SPPL3-209ENST00000545209 SNAPC4Q5SXM2 1469 aa10.7□□□□□ -0.7
SPPL3-209ENST00000545209 MAGI1Q96QZ7 1491 aaPredicted RBP10.7□□□□□ -0.7
SPPL3-209ENST00000545209 TIE1P35590 1138 aa10.7□□□□□ -0.7
SPPL3-209ENST00000545209 FHOD3Q2V2M9 1422 aa10.69□□□□□ -0.7
SPPL3-209ENST00000545209 FMN1Q68DA7 1419 aa10.69□□□□□ -0.7
SPPL3-209ENST00000545209 ECM2O94769 699 aaPredicted RBP10.69□□□□□ -0.7
SPPL3-209ENST00000545209 FYCO1Q9BQS8 1478 aa10.68□□□□□ -0.7
SPPL3-209ENST00000545209 ZEB1P37275 1124 aaPredicted RBP10.68□□□□□ -0.7
SPPL3-209ENST00000545209 BMP2KQ9NSY1 1161 aaPredicted RBP10.68□□□□□ -0.7
SPPL3-209ENST00000545209 IQGAP2Q13576 1575 aa10.68□□□□□ -0.7
SPPL3-209ENST00000545209 SAMD9Q5K651 1589 aa10.68□□□□□ -0.7
SPPL3-209ENST00000545209 ATMINO43313 823 aaPredicted RBP10.67□□□□□ -0.7
SPPL3-209ENST00000545209 ASTLQ6HA08 431 aaPredicted RBP10.67□□□□□ -0.7
SPPL3-209ENST00000545209 P3H3Q8IVL6 736 aa10.67□□□□□ -0.7
SPPL3-209ENST00000545209 PCF11O94913 1555 aaKnown RBP10.66□□□□□ -0.7
SPPL3-209ENST00000545209 TIAM1Q13009 1591 aa10.66□□□□□ -0.7
SPPL3-209ENST00000545209 GRIN2AQ12879 1464 aa10.66□□□□□ -0.7
SPPL3-209ENST00000545209 CASKIN1Q8WXD9 1431 aa10.66□□□□□ -0.7
SPPL3-209ENST00000545209 TTLL13PA6NNM8 815 aa10.65□□□□□ -0.7
SPPL3-209ENST00000545209 SYNJ2O15056 1496 aa10.65□□□□□ -0.7
SPPL3-209ENST00000545209 KIAA0586Q9BVV6 1533 aa10.64□□□□□ -0.71
SPPL3-209ENST00000545209 TMEM106CQ9BVX2 250 aa10.64□□□□□ -0.71
SPPL3-209ENST00000545209 RIOK3O14730 519 aaKnown RBP10.63□□□□□ -0.71
SPPL3-209ENST00000545209 ATN1P54259 1190 aaPredicted RBP10.63□□□□□ -0.71
SPPL3-209ENST00000545209 PDAP1Q13442 181 aaKnown RBP10.63□□□□□ -0.71
SPPL3-209ENST00000545209 KANK4Q5T7N3 995 aaPredicted RBP10.63□□□□□ -0.71
SPPL3-209ENST00000545209 CHMP7Q8WUX9 453 aaPredicted RBP10.63□□□□□ -0.71
SPPL3-209ENST00000545209 RNF25Q96BH1 459 aaPredicted RBP10.63□□□□□ -0.71
SPPL3-209ENST00000545209 UGGT2Q9NYU1 1516 aa10.63□□□□□ -0.71
SPPL3-209ENST00000545209 CFAP43Q8NDM7 1665 aa10.63□□□□□ -0.71
SPPL3-209ENST00000545209 PSEN1P49768 467 aa10.62□□□□□ -0.71
SPPL3-209ENST00000545209 PELP1Q8IZL8 1130 aaKnown RBP10.62□□□□□ -0.71
SPPL3-209ENST00000545209 ATP1B4Q9UN42 357 aaPredicted RBP10.62□□□□□ -0.71
SPPL3-209ENST00000545209 LRRC9Q6ZRR7 1453 aa10.61□□□□□ -0.71
SPPL3-209ENST00000545209 RGL2O15211 777 aa10.59□□□□□ -0.71
SPPL3-209ENST00000545209 RRBP1Q9P2E9 1410 aaKnown RBP10.58□□□□□ -0.72
SPPL3-209ENST00000545209 VGFO15240 615 aaPredicted RBP10.57□□□□□ -0.72
SPPL3-209ENST00000545209 CCER1Q8TC90 406 aaPredicted RBP10.57□□□□□ -0.72
SPPL3-209ENST00000545209 TRIM35Q9UPQ4 493 aa10.57□□□□□ -0.72
SPPL3-209ENST00000545209 NUP160Q12769 1436 aa10.57□□□□□ -0.72
SPPL3-209ENST00000545209 CCDC18Q5T9S5 1454 aa10.56□□□□□ -0.72
SPPL3-209ENST00000545209 CCNB3Q8WWL7 1395 aa10.56□□□□□ -0.72
SPPL3-209ENST00000545209 HECW1Q76N89 1606 aa10.56□□□□□ -0.72
SPPL3-209ENST00000545209 TAOK2Q9UL54 1235 aa10.56□□□□□ -0.72
SPPL3-209ENST00000545209 CEP170Q5SW79 1584 aa10.56□□□□□ -0.72
SPPL3-209ENST00000545209 KIAA0556O60303 1618 aa10.55□□□□□ -0.72
SPPL3-209ENST00000545209 C7P10643 843 aa10.55□□□□□ -0.72
SPPL3-209ENST00000545209 SLC39A7Q92504 469 aa10.55□□□□□ -0.72
SPPL3-209ENST00000545209 MTUS2Q5JR59 1369 aa10.54□□□□□ -0.72
SPPL3-209ENST00000545209 AMER1Q5JTC6 1135 aaPredicted RBP10.54□□□□□ -0.72
SPPL3-209ENST00000545209 CARMIL2Q6F5E8 1435 aa10.54□□□□□ -0.72
SPPL3-209ENST00000545209 DISP1Q96F81 1524 aa10.53□□□□□ -0.72
SPPL3-209ENST00000545209 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.52□□□□□ -0.73
SPPL3-209ENST00000545209 ZFP91Q96JP5 570 aaPredicted RBP10.52□□□□□ -0.73
SPPL3-209ENST00000545209 METRNQ9UJH8 293 aa10.52□□□□□ -0.73
SPPL3-209ENST00000545209 EHBP1L1Q8N3D4 1523 aa10.52□□□□□ -0.73
SPPL3-209ENST00000545209 IER5LQ5T953 404 aa10.51□□□□□ -0.73
SPPL3-209ENST00000545209 RTN4Q9NQC3 1192 aaKnown RBP10.5□□□□□ -0.73
SPPL3-209ENST00000545209 PHLDB1Q86UU1 1377 aa10.5□□□□□ -0.73
SPPL3-209ENST00000545209 EPRSP07814 1512 aaKnown RBP10.49□□□□□ -0.73
SPPL3-209ENST00000545209 GOLGA2Q08379 1002 aa10.49□□□□□ -0.73
SPPL3-209ENST00000545209 JPH4Q96JJ6 628 aa10.49□□□□□ -0.73
SPPL3-209ENST00000545209 CABP2Q9NPB3 220 aa10.48□□□□□ -0.73
SPPL3-209ENST00000545209 SUPT6HQ7KZ85 1726 aaKnown RBP10.47□□□□□ -0.73
SPPL3-209ENST00000545209 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.47□□□□□ -0.73
SPPL3-209ENST00000545209 RAPGEF6Q8TEU7 1601 aa10.47□□□□□ -0.73
SPPL3-209ENST00000545209 LRRIQ1Q96JM4 1722 aa10.47□□□□□ -0.73
SPPL3-209ENST00000545209 MKRN3Q13064 507 aaKnown RBP10.46□□□□□ -0.73
SPPL3-209ENST00000545209 FAM50AQ14320 339 aaKnown RBP10.46□□□□□ -0.73
SPPL3-209ENST00000545209 NCOA2Q15596 1464 aa10.46□□□□□ -0.74
SPPL3-209ENST00000545209 CHD1O14646 1710 aa10.46□□□□□ -0.74
SPPL3-209ENST00000545209 FGD6Q6ZV73 1430 aa10.45□□□□□ -0.74
SPPL3-209ENST00000545209 SEC24BO95487 1268 aa10.45□□□□□ -0.74
SPPL3-209ENST00000545209 CDK11AQ9UQ88 783 aaPredicted RBP10.45□□□□□ -0.74
SPPL3-209ENST00000545209 CDK13Q14004 1512 aaKnown RBP10.44□□□□□ -0.74
SPPL3-209ENST00000545209 MYOM3Q5VTT5 1437 aa10.44□□□□□ -0.74
SPPL3-209ENST00000545209 STK25O00506 426 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms