RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 ABCA8O94911 1581 aa25.22■■□□□ 1.63
SCARB1-208ENST00000544327 PRG4Q92954 1404 aaPredicted RBP25.22■■□□□ 1.63
SCARB1-208ENST00000544327 JPH4Q96JJ6 628 aa25.21■■□□□ 1.63
SCARB1-208ENST00000544327 CAMSAP2Q08AD1 1489 aa25.19■■□□□ 1.62
SCARB1-208ENST00000544327 GPATCH8Q9UKJ3 1502 aaKnown RBP25.19■■□□□ 1.62
SCARB1-208ENST00000544327 ADGBQ8N7X0 1667 aa25.19■■□□□ 1.62
SCARB1-208ENST00000544327 DDX10Q13206 875 aaKnown RBP25.18■■□□□ 1.62
SCARB1-208ENST00000544327 MPHOSPH9Q99550 1183 aa25.18■■□□□ 1.62
SCARB1-208ENST00000544327 KIF14Q15058 1648 aa25.17■■□□□ 1.62
SCARB1-208ENST00000544327 TRIM52Q96A61 297 aa25.16■■□□□ 1.62
SCARB1-208ENST00000544327 CROCC2H7BZ55 1655 aa25.16■■□□□ 1.62
SCARB1-208ENST00000544327 ADGRL2O95490 1459 aa25.15■■□□□ 1.62
SCARB1-208ENST00000544327 ZNF644Q9H582 1327 aaPredicted RBP25.13■■□□□ 1.61
SCARB1-208ENST00000544327 FBLN2P98095 1184 aa25.12■■□□□ 1.61
SCARB1-208ENST00000544327 ANKRD30BQ9BXX2 1392 aa25.1■■□□□ 1.61
SCARB1-208ENST00000544327 CFDP1Q9UEE9 299 aaPredicted RBP25.09■■□□□ 1.61
SCARB1-208ENST00000544327 CCER2I3L3R5 266 aa25.08■■□□□ 1.61
SCARB1-208ENST00000544327 ABCC10Q5T3U5 1492 aa25.08■■□□□ 1.61
SCARB1-208ENST00000544327 RPRD2Q5VT52 1461 aaKnown RBP25.08■■□□□ 1.61
SCARB1-208ENST00000544327 ATP10BO94823 1461 aa25.07■■□□□ 1.6
SCARB1-208ENST00000544327 NCOA1Q15788 1441 aa25.07■■□□□ 1.6
SCARB1-208ENST00000544327 CDC42BPAQ5VT25 1732 aa25.07■■□□□ 1.6
SCARB1-208ENST00000544327 HIRIP3Q9BW71 556 aaPredicted RBP25.04■■□□□ 1.6
SCARB1-208ENST00000544327 SHANK2Q9UPX8 1470 aa25.03■■□□□ 1.6
SCARB1-208ENST00000544327 PZPP20742 1482 aa25.03■■□□□ 1.6
SCARB1-208ENST00000544327 TEX14Q8IWB6 1497 aa25.01■■□□□ 1.59
SCARB1-208ENST00000544327 KCNH8Q96L42 1107 aa25.01■■□□□ 1.59
SCARB1-208ENST00000544327 PLEKHD1A6NEE1 506 aa25■■□□□ 1.59
SCARB1-208ENST00000544327 ANP32CO43423 234 aa25■■□□□ 1.59
SCARB1-208ENST00000544327 ANKRD30AQ9BXX3 1397 aa24.97■■□□□ 1.59
SCARB1-208ENST00000544327 L3MBTL2Q969R5 705 aa24.97■■□□□ 1.59
SCARB1-208ENST00000544327 SHROOM2Q13796 1616 aa24.96■■□□□ 1.59
SCARB1-208ENST00000544327 CHD1O14646 1710 aa24.96■■□□□ 1.59
SCARB1-208ENST00000544327 SLC4A1APQ9BWU0 796 aaKnown RBP24.94■■□□□ 1.58
SCARB1-208ENST00000544327 ARHGEF5Q12774 1597 aa24.94■■□□□ 1.58
SCARB1-208ENST00000544327 PTPRGP23470 1445 aa24.93■■□□□ 1.58
SCARB1-208ENST00000544327 FOXD1Q16676 465 aa24.93■■□□□ 1.58
SCARB1-208ENST00000544327 HSPA5P11021 654 aaKnown RBP24.93■■□□□ 1.58
SCARB1-208ENST00000544327 EIF4G2P78344 907 aaKnown RBP eCLIP24.91■■□□□ 1.58
SCARB1-208ENST00000544327 KIAA1107Q9UPP5 1409 aa24.9■■□□□ 1.58
SCARB1-208ENST00000544327 KDM5DQ9BY66 1539 aa24.89■■□□□ 1.57
SCARB1-208ENST00000544327 C9orf84Q5VXU9 1444 aa24.88■■□□□ 1.57
SCARB1-208ENST00000544327 ANKRD50Q9ULJ7 1429 aa24.88■■□□□ 1.57
SCARB1-208ENST00000544327 ZNF777Q9ULD5 760 aaPredicted RBP24.88■■□□□ 1.57
SCARB1-208ENST00000544327 MBD5Q9P267 1494 aa24.87■■□□□ 1.57
SCARB1-208ENST00000544327 WASHC2AQ641Q2 1341 aa24.87■■□□□ 1.57
SCARB1-208ENST00000544327 PREX2Q70Z35 1606 aa24.86■■□□□ 1.57
SCARB1-208ENST00000544327 SUPT16HQ9Y5B9 1047 aaKnown RBP24.84■■□□□ 1.57
SCARB1-208ENST00000544327 POLR1AO95602 1720 aaPredicted RBP24.83■■□□□ 1.57
SCARB1-208ENST00000544327 CDC42BPBQ9Y5S2 1711 aa24.82■■□□□ 1.56
SCARB1-208ENST00000544327 SPATA31E1Q6ZUB1 1445 aa24.82■■□□□ 1.56
SCARB1-208ENST00000544327 NBPF8Q3BBV2 869 aa24.82■■□□□ 1.56
SCARB1-208ENST00000544327 SAMD9LQ8IVG5 1584 aa24.81■■□□□ 1.56
SCARB1-208ENST00000544327 CNTLNQ9NXG0 1405 aa24.8■■□□□ 1.56
SCARB1-208ENST00000544327 CCDC7Q96M83 1385 aa24.77■■□□□ 1.56
SCARB1-208ENST00000544327 CCDC141Q6ZP82 1450 aa24.77■■□□□ 1.56
SCARB1-208ENST00000544327 MAST1Q9Y2H9 1570 aa24.75■■□□□ 1.55
SCARB1-208ENST00000544327 ABCC2Q92887 1545 aa24.75■■□□□ 1.55
SCARB1-208ENST00000544327 TSPY4P0CV99 314 aa24.75■■□□□ 1.55
SCARB1-208ENST00000544327 TSPY10P0CW01 314 aa24.75■■□□□ 1.55
SCARB1-208ENST00000544327 RSPH4AQ5TD94 716 aa24.75■■□□□ 1.55
SCARB1-208ENST00000544327 PKD2Q13563 968 aa24.74■■□□□ 1.55
SCARB1-208ENST00000544327 KIF15Q9NS87 1388 aa24.73■■□□□ 1.55
SCARB1-208ENST00000544327 ARHGEF12Q9NZN5 1544 aa24.71■■□□□ 1.55
SCARB1-208ENST00000544327 UHRF1BP1Q6BDS2 1440 aa24.71■■□□□ 1.55
SCARB1-208ENST00000544327 NUP155O75694 1391 aa24.7■■□□□ 1.54
SCARB1-208ENST00000544327 TTC37Q6PGP7 1564 aa24.7■■□□□ 1.54
SCARB1-208ENST00000544327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.7■■□□□ 1.543e-8■■■■■ 36.9
SCARB1-208ENST00000544327 C11orf95C9JLR9 678 aaPredicted RBP24.68■■□□□ 1.54
SCARB1-208ENST00000544327 ERCC6L2Q5T890 1561 aa24.68■■□□□ 1.54
SCARB1-208ENST00000544327 CLASP1Q7Z460 1538 aa24.67■■□□□ 1.54
SCARB1-208ENST00000544327 HNRNPMP52272 730 aaKnown RBP eCLIP24.67■■□□□ 1.541e-8■■■■■ 26.8
SCARB1-208ENST00000544327 MYO5CQ9NQX4 1742 aa24.66■■□□□ 1.54
SCARB1-208ENST00000544327 PLEKHH2Q8IVE3 1493 aa24.65■■□□□ 1.54
SCARB1-208ENST00000544327 UHRF1BP1LA0JNW5 1464 aa24.64■■□□□ 1.53
SCARB1-208ENST00000544327 SYCP2Q9BX26 1530 aa24.64■■□□□ 1.53
SCARB1-208ENST00000544327 PLXNC1O60486 1568 aa24.64■■□□□ 1.53
SCARB1-208ENST00000544327 RALGAPBQ86X10 1494 aa24.63■■□□□ 1.53
SCARB1-208ENST00000544327 UNC13BO14795 1591 aa24.63■■□□□ 1.53
SCARB1-208ENST00000544327 KDM5CP41229 1560 aa24.63■■□□□ 1.53
SCARB1-208ENST00000544327 ARHGAP5Q13017 1502 aa24.63■■□□□ 1.53
SCARB1-208ENST00000544327 KIF7Q2M1P5 1343 aa24.62■■□□□ 1.53
SCARB1-208ENST00000544327 FAM135AQ9P2D6 1515 aa24.61■■□□□ 1.53
SCARB1-208ENST00000544327 USP47Q96K76 1375 aa24.57■■□□□ 1.52
SCARB1-208ENST00000544327 ARID4BQ4LE39 1312 aaPredicted RBP24.57■■□□□ 1.52
SCARB1-208ENST00000544327 ZCCHC11Q5TAX3 1644 aaKnown RBP24.57■■□□□ 1.52
SCARB1-208ENST00000544327 BCORL1Q5H9F3 1711 aa24.56■■□□□ 1.52
SCARB1-208ENST00000544327 PRKRIP1Q9H875 184 aaPredicted RBP24.56■■□□□ 1.52
SCARB1-208ENST00000544327 IQGAP3Q86VI3 1631 aa24.52■■□□□ 1.52
SCARB1-208ENST00000544327 PLCH2O75038 1416 aa24.52■■□□□ 1.52
SCARB1-208ENST00000544327 DUOX2Q9NRD8 1548 aa24.5■■□□□ 1.51
SCARB1-208ENST00000544327 MAGI2Q86UL8 1455 aa24.5■■□□□ 1.51
SCARB1-208ENST00000544327 ABCC1P33527 1531 aa24.47■■□□□ 1.51
SCARB1-208ENST00000544327 ARAP3Q8WWN8 1544 aa24.47■■□□□ 1.51
SCARB1-208ENST00000544327 FKBP8Q14318 412 aa24.47■■□□□ 1.51
SCARB1-208ENST00000544327 ERBINQ96RT1 1412 aa24.47■■□□□ 1.51
SCARB1-208ENST00000544327 DHX29Q7Z478 1369 aaKnown RBP24.46■■□□□ 1.51
SCARB1-208ENST00000544327 NEFLP07196 543 aa24.46■■□□□ 1.51
SCARB1-208ENST00000544327 HNRNPUQ00839 825 aaKnown RBP eCLIP24.46■■□□□ 1.51
SCARB1-208ENST00000544327 ROCK2O75116 1388 aaKnown RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms