RNA–Protein interactions for RNA: ENST00000543814.5

PAAF1-213, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5

Gene PAAF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-213ENST00000543814 PREX1Q8TCU6 1659 aa28.97■■■□□ 2.23
PAAF1-213ENST00000543814 DMRT2Q9Y5R5 561 aa28.96■■■□□ 2.23
PAAF1-213ENST00000543814 ARHGEF12Q9NZN5 1544 aa28.95■■■□□ 2.23
PAAF1-213ENST00000543814 STRCQ7RTU9 1775 aa28.92■■■□□ 2.22
PAAF1-213ENST00000543814 SPATA31D1Q6ZQQ2 1576 aa28.89■■■□□ 2.22
PAAF1-213ENST00000543814 CEBPAP49715 358 aaPredicted RBP28.89■■■□□ 2.22
PAAF1-213ENST00000543814 ATP10AO60312 1499 aa28.89■■■□□ 2.22
PAAF1-213ENST00000543814 SCAPERQ9BY12 1400 aa28.88■■■□□ 2.21
PAAF1-213ENST00000543814 C9orf84Q5VXU9 1444 aa28.85■■■□□ 2.21
PAAF1-213ENST00000543814 PLCH2O75038 1416 aa28.83■■■□□ 2.21
PAAF1-213ENST00000543814 CSRNP3Q8WYN3 585 aa28.82■■■□□ 2.2
PAAF1-213ENST00000543814 UHRF1BP1Q6BDS2 1440 aa28.81■■■□□ 2.2
PAAF1-213ENST00000543814 PTPRTO14522 1441 aa28.79■■■□□ 2.2
PAAF1-213ENST00000543814 RANGAP1P46060 587 aaPredicted RBP28.79■■■□□ 2.2
PAAF1-213ENST00000543814 LTBP4Q8N2S1 1624 aa28.72■■■□□ 2.19
PAAF1-213ENST00000543814 SETD1BQ9UPS6 1966 aaKnown RBP28.71■■■□□ 2.19
PAAF1-213ENST00000543814 CDK13Q14004 1512 aaKnown RBP28.71■■■□□ 2.19
PAAF1-213ENST00000543814 EFCAB2Q5VUJ9 269 aa28.7■■■□□ 2.18
PAAF1-213ENST00000543814 IQSEC2Q5JU85 1478 aa28.7■■■□□ 2.18
PAAF1-213ENST00000543814 ZNF518AQ6AHZ1 1483 aa28.66■■■□□ 2.18
PAAF1-213ENST00000543814 MYO5CQ9NQX4 1742 aa28.63■■■□□ 2.17
PAAF1-213ENST00000543814 KDM5CP41229 1560 aa28.63■■■□□ 2.17
PAAF1-213ENST00000543814 C3P01024 1663 aa28.62■■■□□ 2.17
PAAF1-213ENST00000543814 AFAP1Q8N556 730 aa28.61■■■□□ 2.17
PAAF1-213ENST00000543814 REREQ9P2R6 1566 aa28.61■■■□□ 2.17
PAAF1-213ENST00000543814 DIP2CQ9Y2E4 1556 aa28.59■■■□□ 2.17
PAAF1-213ENST00000543814 TRAPPC8Q9Y2L5 1435 aa28.59■■■□□ 2.17
PAAF1-213ENST00000543814 NCOA1Q15788 1441 aa28.57■■■□□ 2.16
PAAF1-213ENST00000543814 MYT1LQ9UL68 1186 aa28.53■■■□□ 2.16
PAAF1-213ENST00000543814 EEA1Q15075 1411 aa28.52■■■□□ 2.16
PAAF1-213ENST00000543814 AGLP35573 1532 aa28.52■■■□□ 2.16
PAAF1-213ENST00000543814 KIF14Q15058 1648 aa28.51■■■□□ 2.15
PAAF1-213ENST00000543814 ESF1Q9H501 851 aaKnown RBP28.51■■■□□ 2.15
PAAF1-213ENST00000543814 ARHGAP5Q13017 1502 aa28.51■■■□□ 2.15
PAAF1-213ENST00000543814 MLH3Q9UHC1 1453 aa28.51■■■□□ 2.15
PAAF1-213ENST00000543814 ABCA6Q8N139 1617 aa28.51■■■□□ 2.15
PAAF1-213ENST00000543814 CDK11AQ9UQ88 783 aaPredicted RBP28.49■■■□□ 2.15
PAAF1-213ENST00000543814 CNTLNQ9NXG0 1405 aa28.45■■■□□ 2.15
PAAF1-213ENST00000543814 ATP1B4Q9UN42 357 aaPredicted RBP28.45■■■□□ 2.14
PAAF1-213ENST00000543814 TROQ12816 1431 aaPredicted RBP28.43■■■□□ 2.14
PAAF1-213ENST00000543814 CAMSAP1Q5T5Y3 1602 aa28.43■■■□□ 2.14
PAAF1-213ENST00000543814 UBAP1LF5GYI3 381 aa28.43■■■□□ 2.14
PAAF1-213ENST00000543814 FMN1Q68DA7 1419 aa28.42■■■□□ 2.14
PAAF1-213ENST00000543814 ZNF335Q9H4Z2 1342 aaPredicted RBP28.41■■■□□ 2.14
PAAF1-213ENST00000543814 NPATQ14207 1427 aa28.4■■■□□ 2.14
PAAF1-213ENST00000543814 NCKAP5LQ9HCH0 1330 aa28.38■■■□□ 2.13
PAAF1-213ENST00000543814 CDC42BPBQ9Y5S2 1711 aa28.38■■■□□ 2.13
PAAF1-213ENST00000543814 CLIP1P30622 1438 aa28.37■■■□□ 2.13
PAAF1-213ENST00000543814 ABCC1P33527 1531 aa28.34■■■□□ 2.13
PAAF1-213ENST00000543814 MROH2AA6NES4 1674 aa28.34■■■□□ 2.13
PAAF1-213ENST00000543814 KIDINS220Q9ULH0 1771 aa28.33■■■□□ 2.13
PAAF1-213ENST00000543814 ZMYM3Q14202 1370 aa28.31■■■□□ 2.12
PAAF1-213ENST00000543814 ITSN2Q9NZM3 1697 aa28.3■■■□□ 2.12
PAAF1-213ENST00000543814 PREX2Q70Z35 1606 aa28.29■■■□□ 2.12
PAAF1-213ENST00000543814 PKD2Q13563 968 aa28.29■■■□□ 2.12
PAAF1-213ENST00000543814 PLA2R1Q13018 1463 aa28.28■■■□□ 2.12
PAAF1-213ENST00000543814 ARHGAP35Q9NRY4 1499 aa28.28■■■□□ 2.12
PAAF1-213ENST00000543814 TCOF1Q13428 1488 aaKnown RBP28.26■■■□□ 2.11
PAAF1-213ENST00000543814 LRRIQ1Q96JM4 1722 aa28.24■■■□□ 2.11
PAAF1-213ENST00000543814 ZNF142P52746 1687 aaPredicted RBP28.24■■■□□ 2.11
PAAF1-213ENST00000543814 MED1Q15648 1581 aaPredicted RBP28.23■■■□□ 2.11
PAAF1-213ENST00000543814 MYO3AQ8NEV4 1616 aa28.21■■■□□ 2.11
PAAF1-213ENST00000543814 SAMD9LQ8IVG5 1584 aa28.2■■■□□ 2.1
PAAF1-213ENST00000543814 CEP170BQ9Y4F5 1589 aaPredicted RBP28.2■■■□□ 2.1
PAAF1-213ENST00000543814 HSPA1LP34931 641 aa28.19■■■□□ 2.1
PAAF1-213ENST00000543814 UBTFP17480 764 aaKnown RBP28.17■■■□□ 2.1
PAAF1-213ENST00000543814 PPP6R1Q9UPN7 881 aa28.17■■■□□ 2.1
PAAF1-213ENST00000543814 PTPRKQ15262 1439 aa28.17■■■□□ 2.1
PAAF1-213ENST00000543814 CLTCQ00610 1675 aaKnown RBP28.16■■■□□ 2.1
PAAF1-213ENST00000543814 SUPT6HQ7KZ85 1726 aaKnown RBP28.16■■■□□ 2.1
PAAF1-213ENST00000543814 CDC42BPAQ5VT25 1732 aa28.13■■■□□ 2.09
PAAF1-213ENST00000543814 SPAG9O60271 1321 aaKnown RBP28.12■■■□□ 2.09
PAAF1-213ENST00000543814 PIP4K2BP78356 416 aa28.11■■■□□ 2.09
PAAF1-213ENST00000543814 SCAF1Q9H7N4 1312 aaKnown RBP28.11■■■□□ 2.09
PAAF1-213ENST00000543814 TOM1O60784 492 aa28.1■■■□□ 2.09
PAAF1-213ENST00000543814 EHMT2Q96KQ7 1210 aa28.1■■■□□ 2.09
PAAF1-213ENST00000543814 PLXNC1O60486 1568 aa28.09■■■□□ 2.09
PAAF1-213ENST00000543814 CCDC18Q5T9S5 1454 aa28.07■■■□□ 2.08
PAAF1-213ENST00000543814 SYCP2Q9BX26 1530 aa28.07■■■□□ 2.08
PAAF1-213ENST00000543814 ZNF777Q9ULD5 760 aaPredicted RBP28.06■■■□□ 2.08
PAAF1-213ENST00000543814 CPS1P31327 1500 aa28.06■■■□□ 2.08
PAAF1-213ENST00000543814 ATP7AQ04656 1500 aa28.06■■■□□ 2.08
PAAF1-213ENST00000543814 A2MP01023 1474 aa28.05■■■□□ 2.08
PAAF1-213ENST00000543814 A2ML1A8K2U0 1454 aa28.04■■■□□ 2.08
PAAF1-213ENST00000543814 HNRNPMP52272 730 aaKnown RBP eCLIP28.04■■■□□ 2.08
PAAF1-213ENST00000543814 DNMT1P26358 1616 aaKnown RBP28.03■■■□□ 2.08
PAAF1-213ENST00000543814 GGT6Q6P531 493 aa28.03■■■□□ 2.08
PAAF1-213ENST00000543814 CASKIN1Q8WXD9 1431 aa28.02■■■□□ 2.08
PAAF1-213ENST00000543814 SHANK2Q9UPX8 1470 aa28.02■■■□□ 2.08
PAAF1-213ENST00000543814 INO80Q9ULG1 1556 aaPredicted RBP28.01■■■□□ 2.07
PAAF1-213ENST00000543814 GPATCH8Q9UKJ3 1502 aaKnown RBP27.99■■■□□ 2.07
PAAF1-213ENST00000543814 PHF23Q9BUL5 403 aaPredicted RBP27.99■■■□□ 2.07
PAAF1-213ENST00000543814 KIAA1107Q9UPP5 1409 aa27.98■■■□□ 2.07
PAAF1-213ENST00000543814 NEURL4Q96JN8 1562 aa27.98■■■□□ 2.07
PAAF1-213ENST00000543814 POLR1AO95602 1720 aaPredicted RBP27.95■■■□□ 2.07
PAAF1-213ENST00000543814 PLEKHH2Q8IVE3 1493 aa27.93■■■□□ 2.06
PAAF1-213ENST00000543814 ALKQ9UM73 1620 aa27.92■■■□□ 2.06
PAAF1-213ENST00000543814 VWDEQ8N2E2 1590 aa27.9■■■□□ 2.06
PAAF1-213ENST00000543814 ADGBQ8N7X0 1667 aa27.89■■■□□ 2.06
PAAF1-213ENST00000543814 CFDP1Q9UEE9 299 aaPredicted RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms