RNA–Protein interactions for RNA: ENST00000543216.5

KDM6A-212, Transcript of lysine demethylase 6A, humanhuman

TSL 1 (best) BASIC

Gene KDM6A, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM6A-212ENST00000543216 RCAN3Q9UKA8 241 aa20.8■□□□□ 0.92
KDM6A-212ENST00000543216 RWDD1Q9H446 243 aaPredicted RBP20.8■□□□□ 0.92
KDM6A-212ENST00000543216 MFAP1P55081 439 aaKnown RBP20.79■□□□□ 0.92
KDM6A-212ENST00000543216 ZCCHC6Q5VYS8 1495 aaKnown RBP20.79■□□□□ 0.92
KDM6A-212ENST00000543216 GOLGA2Q08379 1002 aa20.77■□□□□ 0.92
KDM6A-212ENST00000543216 GOLGA3Q08378 1498 aa20.77■□□□□ 0.92
KDM6A-212ENST00000543216 APBB1O00213 710 aa20.76■□□□□ 0.91
KDM6A-212ENST00000543216 GSE1Q14687 1217 aa20.76■□□□□ 0.91
KDM6A-212ENST00000543216 NCBP3Q53F19 620 aaKnown RBP20.76■□□□□ 0.91
KDM6A-212ENST00000543216 ZNF771Q7L3S4 317 aaPredicted RBP20.76■□□□□ 0.91
KDM6A-212ENST00000543216 CSPP1Q1MSJ5 1256 aa20.73■□□□□ 0.91
KDM6A-212ENST00000543216 TMF1P82094 1093 aa20.73■□□□□ 0.91
KDM6A-212ENST00000543216 IPO8O15397 1037 aaKnown RBP20.73■□□□□ 0.91
KDM6A-212ENST00000543216 PHF14O94880 888 aa20.73■□□□□ 0.91
KDM6A-212ENST00000543216 DDX11L8A8MPP1 907 aa20.73■□□□□ 0.91
KDM6A-212ENST00000543216 FOXD4L1Q9NU39 408 aa20.71■□□□□ 0.91
KDM6A-212ENST00000543216 PMFBP1Q8TBY8 1022 aa20.71■□□□□ 0.91
KDM6A-212ENST00000543216 TIMELESSQ9UNS1 1208 aa20.7■□□□□ 0.9
KDM6A-212ENST00000543216 CALRP27797 417 aaKnown RBP20.69■□□□□ 0.9
KDM6A-212ENST00000543216 ITPRIPQ8IWB1 547 aa20.69■□□□□ 0.9
KDM6A-212ENST00000543216 HAP1P54257 671 aaPredicted RBP20.69■□□□□ 0.9
KDM6A-212ENST00000543216 HSP90B1P14625 803 aaKnown RBP20.68■□□□□ 0.9
KDM6A-212ENST00000543216 POGKQ9P215 609 aa20.68■□□□□ 0.9
KDM6A-212ENST00000543216 HSPA5P11021 654 aaKnown RBP20.66■□□□□ 0.9
KDM6A-212ENST00000543216 TPM3P06753 285 aa20.65■□□□□ 0.9
KDM6A-212ENST00000543216 KTN1Q86UP2 1357 aaKnown RBP20.65■□□□□ 0.9
KDM6A-212ENST00000543216 NPHP1O15259 732 aa20.64■□□□□ 0.9
KDM6A-212ENST00000543216 MORC1Q86VD1 984 aa20.64■□□□□ 0.89
KDM6A-212ENST00000543216 EEA1Q15075 1411 aa20.63■□□□□ 0.89
KDM6A-212ENST00000543216 CCDC34Q96HJ3 373 aa20.62■□□□□ 0.89
KDM6A-212ENST00000543216 CFDP1Q9UEE9 299 aaPredicted RBP20.62■□□□□ 0.89
KDM6A-212ENST00000543216 PLEKHD1A6NEE1 506 aa20.62■□□□□ 0.89
KDM6A-212ENST00000543216 GPS2Q13227 327 aa20.61■□□□□ 0.89
KDM6A-212ENST00000543216 FAM13BQ9NYF5 915 aa20.61■□□□□ 0.89
KDM6A-212ENST00000543216 SKOR2Q2VWA4 1001 aaPredicted RBP20.6■□□□□ 0.89
KDM6A-212ENST00000543216 ISY1Q9ULR0 285 aaKnown RBP20.6■□□□□ 0.89
KDM6A-212ENST00000543216 NOL8Q76FK4 1167 aaKnown RBP20.59■□□□□ 0.89
KDM6A-212ENST00000543216 KCNH8Q96L42 1107 aa20.59■□□□□ 0.89
KDM6A-212ENST00000543216 PDE4CQ08493 712 aa20.59■□□□□ 0.89
KDM6A-212ENST00000543216 DDX49Q9Y6V7 483 aaKnown RBP20.58■□□□□ 0.89
KDM6A-212ENST00000543216 DCAF11Q8TEB1 546 aa20.58■□□□□ 0.89
KDM6A-212ENST00000543216 FOXD4L5Q5VV16 416 aaPredicted RBP20.57■□□□□ 0.88
KDM6A-212ENST00000543216 FOXD4L4Q8WXT5 416 aaPredicted RBP20.57■□□□□ 0.88
KDM6A-212ENST00000543216 CCAR2Q8N163 923 aaKnown RBP20.57■□□□□ 0.88
KDM6A-212ENST00000543216 TNIKQ9UKE5 1360 aa20.57■□□□□ 0.88
KDM6A-212ENST00000543216 SLC4A3P48751 1232 aa20.57■□□□□ 0.88
KDM6A-212ENST00000543216 ST18O60284 1047 aa20.56■□□□□ 0.88
KDM6A-212ENST00000543216 CREBRFQ8IUR6 639 aa20.56■□□□□ 0.88
KDM6A-212ENST00000543216 SCRIBQ14160 1630 aa20.55■□□□□ 0.88
KDM6A-212ENST00000543216 TEX35Q5T0J7 233 aa20.55■□□□□ 0.88
KDM6A-212ENST00000543216 PATL2C9JE40 543 aaKnown RBP20.54■□□□□ 0.88
KDM6A-212ENST00000543216 LMOD2Q6P5Q4 547 aa20.54■□□□□ 0.88
KDM6A-212ENST00000543216 TRIM6-TRIM34B2RNG4 842 aa20.54■□□□□ 0.88
KDM6A-212ENST00000543216 RTF1Q92541 710 aaKnown RBP20.54■□□□□ 0.88
KDM6A-212ENST00000543216 RALBP1Q15311 655 aa20.54■□□□□ 0.88
KDM6A-212ENST00000543216 PDE4AP27815 886 aa20.53■□□□□ 0.88
KDM6A-212ENST00000543216 FANCIQ9NVI1 1328 aa20.53■□□□□ 0.88
KDM6A-212ENST00000543216 CHMP7Q8WUX9 453 aaPredicted RBP20.52■□□□□ 0.88
KDM6A-212ENST00000543216 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.52■□□□□ 0.88
KDM6A-212ENST00000543216 ZNF592Q92610 1267 aa20.52■□□□□ 0.88
KDM6A-212ENST00000543216 CCNB3Q8WWL7 1395 aa20.51■□□□□ 0.87
KDM6A-212ENST00000543216 FAM161AQ3B820 660 aa20.5■□□□□ 0.87
KDM6A-212ENST00000543216 GOLGA6L19H0YKK7 550 aa20.5■□□□□ 0.87
KDM6A-212ENST00000543216 KIF16BQ96L93 1317 aa20.49■□□□□ 0.87
KDM6A-212ENST00000543216 RASSF8Q8NHQ8 419 aa20.48■□□□□ 0.87
KDM6A-212ENST00000543216 GPATCH3Q96I76 525 aa20.48■□□□□ 0.87
KDM6A-212ENST00000543216 PKNOX2Q96KN3 472 aa20.48■□□□□ 0.87
KDM6A-212ENST00000543216 SMC4Q9NTJ3 1288 aa20.48■□□□□ 0.87
KDM6A-212ENST00000543216 FAM43AQ8N2R8 423 aa20.47■□□□□ 0.87
KDM6A-212ENST00000543216 CCDC70Q6NSX1 233 aa20.47■□□□□ 0.87
KDM6A-212ENST00000543216 CEP89Q96ST8 783 aa20.47■□□□□ 0.87
KDM6A-212ENST00000543216 SF3A1Q15459 793 aaKnown RBP20.46■□□□□ 0.87
KDM6A-212ENST00000543216 HMMRO75330 724 aa20.46■□□□□ 0.87
KDM6A-212ENST00000543216 U2AF1L5P0DN76 240 aaPredicted RBP20.45■□□□□ 0.86
KDM6A-212ENST00000543216 SRPK2P78362 688 aaKnown RBP20.45■□□□□ 0.86
KDM6A-212ENST00000543216 U2AF1Q01081 240 aaKnown RBP eCLIP20.45■□□□□ 0.861e-7■■■■■ 27.7
KDM6A-212ENST00000543216 PRM3Q9NNZ6 103 aa20.45■□□□□ 0.86
KDM6A-212ENST00000543216 BECN2A8MW95 431 aa20.45■□□□□ 0.86
KDM6A-212ENST00000543216 NOM1Q5C9Z4 860 aaKnown RBP20.44■□□□□ 0.86
KDM6A-212ENST00000543216 SOX12O15370 315 aa20.44■□□□□ 0.86
KDM6A-212ENST00000543216 CENPQQ7L2Z9 268 aaPredicted RBP20.44■□□□□ 0.86
KDM6A-212ENST00000543216 CLUAP1Q96AJ1 413 aa20.44■□□□□ 0.86
KDM6A-212ENST00000543216 PDE3BQ13370 1112 aa20.43■□□□□ 0.86
KDM6A-212ENST00000543216 CEP164Q9UPV0 1460 aa20.43■□□□□ 0.86
KDM6A-212ENST00000543216 TSR1Q2NL82 804 aaKnown RBP20.43■□□□□ 0.86
KDM6A-212ENST00000543216 CENPJQ9HC77 1338 aaPredicted RBP20.42■□□□□ 0.86
KDM6A-212ENST00000543216 KIF3AQ9Y496 699 aa20.42■□□□□ 0.86
KDM6A-212ENST00000543216 SETD5Q9C0A6 1442 aa20.42■□□□□ 0.86
KDM6A-212ENST00000543216 PES1O00541 588 aaKnown RBP20.41■□□□□ 0.86
KDM6A-212ENST00000543216 ATP6V1DQ9Y5K8 247 aa20.41■□□□□ 0.86
KDM6A-212ENST00000543216 TPD52L1Q16890 204 aaPredicted RBP20.41■□□□□ 0.86
KDM6A-212ENST00000543216 TPM1P09493 284 aa20.39■□□□□ 0.85
KDM6A-212ENST00000543216 H3BQV1 296 aa20.38■□□□□ 0.85
KDM6A-212ENST00000543216 FOXD4L6Q3SYB3 417 aaPredicted RBP20.38■□□□□ 0.85
KDM6A-212ENST00000543216 IFFO2Q5TF58 517 aa20.38■□□□□ 0.85
KDM6A-212ENST00000543216 FOXD4L3Q6VB84 417 aaPredicted RBP20.38■□□□□ 0.85
KDM6A-212ENST00000543216 APPP05067 770 aa20.38■□□□□ 0.85
KDM6A-212ENST00000543216 GORABQ5T7V8 394 aa20.36■□□□□ 0.85
KDM6A-212ENST00000543216 STK31Q9BXU1 1019 aa20.36■□□□□ 0.85
KDM6A-212ENST00000543216 MAP7D2Q96T17 732 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms