RNA–Protein interactions for RNA: ENST00000540801.5

SSH2-204, Transcript of slingshot protein phosphatase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH2, Length 4,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-204ENST00000540801 RRP7BPQ9NSQ0 103 aa9.14□□□□□ -0.95
SSH2-204ENST00000540801 ABCC10Q5T3U5 1492 aa9.14□□□□□ -0.95
SSH2-204ENST00000540801 DDX10Q13206 875 aaKnown RBP9.14□□□□□ -0.95
SSH2-204ENST00000540801 GPATCH8Q9UKJ3 1502 aaKnown RBP9.13□□□□□ -0.95
SSH2-204ENST00000540801 ATP1B4Q9UN42 357 aaPredicted RBP9.13□□□□□ -0.95
SSH2-204ENST00000540801 DAPK1P53355 1430 aa9.12□□□□□ -0.95
SSH2-204ENST00000540801 NUP160Q12769 1436 aa9.12□□□□□ -0.95
SSH2-204ENST00000540801 KIAA0586Q9BVV6 1533 aa9.11□□□□□ -0.95
SSH2-204ENST00000540801 TTC37Q6PGP7 1564 aa9.11□□□□□ -0.95
SSH2-204ENST00000540801 ANKRD30BQ9BXX2 1392 aa9.11□□□□□ -0.95
SSH2-204ENST00000540801 SAMD9LQ8IVG5 1584 aa9.11□□□□□ -0.95
SSH2-204ENST00000540801 ADGBQ8N7X0 1667 aa9.1□□□□□ -0.95
SSH2-204ENST00000540801 ARHGEF12Q9NZN5 1544 aa9.1□□□□□ -0.95
SSH2-204ENST00000540801 ATP10BO94823 1461 aa9.09□□□□□ -0.95
SSH2-204ENST00000540801 SHROOM2Q13796 1616 aa9.09□□□□□ -0.95
SSH2-204ENST00000540801 E9PCH4 1651 aa9.09□□□□□ -0.95
SSH2-204ENST00000540801 CAMSAP2Q08AD1 1489 aa9.09□□□□□ -0.95
SSH2-204ENST00000540801 IFT140Q96RY7 1462 aa9.09□□□□□ -0.95
SSH2-204ENST00000540801 APLP2Q06481 763 aa9.08□□□□□ -0.96
SSH2-204ENST00000540801 MTUS2Q5JR59 1369 aa9.08□□□□□ -0.96
SSH2-204ENST00000540801 MYO5CQ9NQX4 1742 aa9.08□□□□□ -0.96
SSH2-204ENST00000540801 KDM5CP41229 1560 aa9.08□□□□□ -0.96
SSH2-204ENST00000540801 PLA2R1Q13018 1463 aa9.08□□□□□ -0.96
SSH2-204ENST00000540801 NCOA1Q15788 1441 aa9.07□□□□□ -0.96
SSH2-204ENST00000540801 RPRD2Q5VT52 1461 aaKnown RBP9.06□□□□□ -0.96
SSH2-204ENST00000540801 AKNAQ7Z591 1439 aa9.06□□□□□ -0.96
SSH2-204ENST00000540801 GOLGB1Q14789 3259 aaKnown RBP9.05□□□□□ -0.96
SSH2-204ENST00000540801 L3MBTL2Q969R5 705 aa9.05□□□□□ -0.96
SSH2-204ENST00000540801 SYNJ2O15056 1496 aa9.04□□□□□ -0.96
SSH2-204ENST00000540801 DHX29Q7Z478 1369 aaKnown RBP9.04□□□□□ -0.96
SSH2-204ENST00000540801 SENP3-EIF4A1A0A087X0R7 540 aa9.03□□□□□ -0.96
SSH2-204ENST00000540801 MPHOSPH9Q99550 1183 aa9.03□□□□□ -0.96
SSH2-204ENST00000540801 TSHZ2Q9NRE2 1034 aa9.02□□□□□ -0.97
SSH2-204ENST00000540801 MIA2Q96PC5 1412 aa9.02□□□□□ -0.97
SSH2-204ENST00000540801 TRIM52Q96A61 297 aa9.02□□□□□ -0.97
SSH2-204ENST00000540801 PREX2Q70Z35 1606 aa9.01□□□□□ -0.97
SSH2-204ENST00000540801 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.01□□□□□ -0.97
SSH2-204ENST00000540801 KDM5DQ9BY66 1539 aa9.01□□□□□ -0.97
SSH2-204ENST00000540801 ADGRL2O95490 1459 aa9.01□□□□□ -0.97
SSH2-204ENST00000540801 HSPA5P11021 654 aaKnown RBP9.01□□□□□ -0.97
SSH2-204ENST00000540801 MAGI1Q96QZ7 1491 aaPredicted RBP9□□□□□ -0.97
SSH2-204ENST00000540801 ABCC2Q92887 1545 aa9□□□□□ -0.97
SSH2-204ENST00000540801 TRPM1Q7Z4N2 1603 aa8.99□□□□□ -0.97
SSH2-204ENST00000540801 ITSN2Q9NZM3 1697 aa8.99□□□□□ -0.97
SSH2-204ENST00000540801 PTPRGP23470 1445 aa8.99□□□□□ -0.97
SSH2-204ENST00000540801 TROQ12816 1431 aaPredicted RBP8.98□□□□□ -0.97
SSH2-204ENST00000540801 ROCK1Q13464 1354 aa8.96□□□□□ -0.97
SSH2-204ENST00000540801 KIF7Q2M1P5 1343 aa8.95□□□□□ -0.98
SSH2-204ENST00000540801 ZCCHC11Q5TAX3 1644 aaKnown RBP8.95□□□□□ -0.98
SSH2-204ENST00000540801 MROH1Q8NDA8 1641 aa8.95□□□□□ -0.98
SSH2-204ENST00000540801 JPH4Q96JJ6 628 aa8.95□□□□□ -0.98
SSH2-204ENST00000540801 MYOM1P52179 1685 aa8.95□□□□□ -0.98
SSH2-204ENST00000540801 CLASP1Q7Z460 1538 aa8.95□□□□□ -0.98
SSH2-204ENST00000540801 SYCP2Q9BX26 1530 aa8.95□□□□□ -0.98
SSH2-204ENST00000540801 MSH5O43196 834 aa8.94□□□□□ -0.98
SSH2-204ENST00000540801 UNC13BO14795 1591 aa8.93□□□□□ -0.98
SSH2-204ENST00000540801 SIGLEC1Q9BZZ2 1709 aa8.93□□□□□ -0.98
SSH2-204ENST00000540801 BCANQ96GW7 911 aa8.92□□□□□ -0.98
SSH2-204ENST00000540801 CCDC7Q96M83 1385 aa8.92□□□□□ -0.98
SSH2-204ENST00000540801 MYT1Q01538 1121 aa8.92□□□□□ -0.98
SSH2-204ENST00000540801 MROH2AA6NES4 1674 aa8.91□□□□□ -0.98
SSH2-204ENST00000540801 IRX6P78412 446 aaPredicted RBP8.91□□□□□ -0.98
SSH2-204ENST00000540801 ARHGEF5Q12774 1597 aa8.91□□□□□ -0.98
SSH2-204ENST00000540801 HNRNPMP52272 730 aaKnown RBP eCLIP8.9□□□□□ -0.98
SSH2-204ENST00000540801 UGGT1Q9NYU2 1555 aa8.9□□□□□ -0.98
SSH2-204ENST00000540801 FAM135AQ9P2D6 1515 aa8.9□□□□□ -0.99
SSH2-204ENST00000540801 MAGI2Q86UL8 1455 aa8.9□□□□□ -0.99
SSH2-204ENST00000540801 CNTLNQ9NXG0 1405 aa8.89□□□□□ -0.99
SSH2-204ENST00000540801 RNF17Q9BXT8 1623 aaKnown RBP8.89□□□□□ -0.99
SSH2-204ENST00000540801 CENPBP07199 599 aaPredicted RBP8.89□□□□□ -0.99
SSH2-204ENST00000540801 A2MP01023 1474 aa8.89□□□□□ -0.99
SSH2-204ENST00000540801 CFAP65Q6ZU64 1925 aaKnown RBP8.89□□□□□ -0.99
SSH2-204ENST00000540801 IQGAP3Q86VI3 1631 aa8.89□□□□□ -0.99
SSH2-204ENST00000540801 ERCC6Q03468 1493 aa8.89□□□□□ -0.99
SSH2-204ENST00000540801 NBPF1Q3BBV0 1214 aa8.88□□□□□ -0.99
SSH2-204ENST00000540801 IFT172Q9UG01 1749 aa8.88□□□□□ -0.99
SSH2-204ENST00000540801 C9orf84Q5VXU9 1444 aa8.88□□□□□ -0.99
SSH2-204ENST00000540801 UHRF1BP1Q6BDS2 1440 aa8.88□□□□□ -0.99
SSH2-204ENST00000540801 UTRNP46939 3433 aa8.88□□□□□ -0.99
SSH2-204ENST00000540801 TONSLQ96HA7 1378 aa8.88□□□□□ -0.99
SSH2-204ENST00000540801 PRKRIP1Q9H875 184 aaPredicted RBP8.87□□□□□ -0.99
SSH2-204ENST00000540801 KIAA1107Q9UPP5 1409 aa8.87□□□□□ -0.99
SSH2-204ENST00000540801 DEPDC5O75140 1603 aa8.87□□□□□ -0.99
SSH2-204ENST00000540801 PLEKHH2Q8IVE3 1493 aa8.87□□□□□ -0.99
SSH2-204ENST00000540801 TIMELESSQ9UNS1 1208 aa8.86□□□□□ -0.99
SSH2-204ENST00000540801 MAST1Q9Y2H9 1570 aa8.86□□□□□ -0.99
SSH2-204ENST00000540801 TRAPPC8Q9Y2L5 1435 aa8.86□□□□□ -0.99
SSH2-204ENST00000540801 IQGAP1P46940 1657 aa8.86□□□□□ -0.99
SSH2-204ENST00000540801 ANKRD50Q9ULJ7 1429 aa8.86□□□□□ -0.99
SSH2-204ENST00000540801 CLTCL1P53675 1640 aa8.86□□□□□ -0.99
SSH2-204ENST00000540801 SHANK2Q9UPX8 1470 aa8.86□□□□□ -0.99
SSH2-204ENST00000540801 FBLN2P98095 1184 aa8.85□□□□□ -0.99
SSH2-204ENST00000540801 PLXNC1O60486 1568 aa8.85□□□□□ -0.99
SSH2-204ENST00000540801 MADDQ8WXG6 1647 aa8.84□□□□□ -0.99
SSH2-204ENST00000540801 KIDINS220Q9ULH0 1771 aa8.84□□□□□ -0.99
SSH2-204ENST00000540801 FKBP8Q14318 412 aa8.84□□□□□ -0.99
SSH2-204ENST00000540801 PELP1Q8IZL8 1130 aaKnown RBP8.84□□□□□ -0.99
SSH2-204ENST00000540801 PER1O15534 1290 aaPredicted RBP8.84□□□□□ -0.99
SSH2-204ENST00000540801 RALGAPBQ86X10 1494 aa8.83□□□□□ -1
SSH2-204ENST00000540801 PKD2Q13563 968 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms