RNA–Protein interactions for RNA: ENST00000539896.1

PTAFR-203, Transcript of platelet activating factor receptor, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTAFR, Length 4,191 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAFR-203ENST00000539896 NLRP13Q86W25 1043 aa12.69□□□□□ -0.38
PTAFR-203ENST00000539896 KIF21BO75037 1637 aa12.69□□□□□ -0.38
PTAFR-203ENST00000539896 MAPK8IP3Q9UPT6 1336 aa12.67□□□□□ -0.38
PTAFR-203ENST00000539896 PDE3BQ13370 1112 aa12.67□□□□□ -0.38
PTAFR-203ENST00000539896 ROCK2O75116 1388 aaKnown RBP12.67□□□□□ -0.38
PTAFR-203ENST00000539896 CCDC18Q5T9S5 1454 aa12.66□□□□□ -0.38
PTAFR-203ENST00000539896 U2SURPO15042 1029 aaKnown RBP12.65□□□□□ -0.38
PTAFR-203ENST00000539896 SPRYD3Q8NCJ5 442 aa12.65□□□□□ -0.38
PTAFR-203ENST00000539896 MS4A1P11836 297 aa12.65□□□□□ -0.38
PTAFR-203ENST00000539896 SLKQ9H2G2 1235 aaPredicted RBP12.65□□□□□ -0.38
PTAFR-203ENST00000539896 NCAPD3P42695 1498 aa12.64□□□□□ -0.39
PTAFR-203ENST00000539896 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
PTAFR-203ENST00000539896 PHLDB1Q86UU1 1377 aa12.64□□□□□ -0.39
PTAFR-203ENST00000539896 CADPSQ9ULU8 1353 aa12.64□□□□□ -0.39
PTAFR-203ENST00000539896 PDE4AP27815 886 aa12.64□□□□□ -0.39
PTAFR-203ENST00000539896 EXOC6Q8TAG9 804 aa12.64□□□□□ -0.39
PTAFR-203ENST00000539896 ANKRD30AQ9BXX3 1397 aa12.64□□□□□ -0.39
PTAFR-203ENST00000539896 HSP90AB1P08238 724 aaKnown RBP12.63□□□□□ -0.39
PTAFR-203ENST00000539896 L1TD1Q5T7N2 865 aaKnown RBP12.63□□□□□ -0.39
PTAFR-203ENST00000539896 MORC1Q86VD1 984 aa12.62□□□□□ -0.39
PTAFR-203ENST00000539896 IGF1RP08069 1367 aa12.62□□□□□ -0.39
PTAFR-203ENST00000539896 GOLGA2Q08379 1002 aa12.61□□□□□ -0.39
PTAFR-203ENST00000539896 HSCBQ8IWL3 235 aa12.61□□□□□ -0.39
PTAFR-203ENST00000539896 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.61□□□□□ -0.39
PTAFR-203ENST00000539896 PTMAP06454 111 aaKnown RBP12.61□□□□□ -0.39
PTAFR-203ENST00000539896 MYBBP1AQ9BQG0 1328 aaKnown RBP12.6□□□□□ -0.39
PTAFR-203ENST00000539896 PLIN1O60240 522 aa12.6□□□□□ -0.39
PTAFR-203ENST00000539896 RRP1P56182 461 aaKnown RBP12.6□□□□□ -0.39
PTAFR-203ENST00000539896 KIF15Q9NS87 1388 aa12.6□□□□□ -0.39
PTAFR-203ENST00000539896 PLPPR3Q6T4P5 718 aa12.59□□□□□ -0.39
PTAFR-203ENST00000539896 USP35Q9P2H5 1018 aa12.59□□□□□ -0.39
PTAFR-203ENST00000539896 RRBP1Q9P2E9 1410 aaKnown RBP12.59□□□□□ -0.39
PTAFR-203ENST00000539896 ARAP1Q96P48 1450 aa12.58□□□□□ -0.39
PTAFR-203ENST00000539896 WASHC2AQ641Q2 1341 aa12.58□□□□□ -0.4
PTAFR-203ENST00000539896 CCDC7Q96M83 1385 aa12.58□□□□□ -0.4
PTAFR-203ENST00000539896 SLC4A3P48751 1232 aa12.58□□□□□ -0.4
PTAFR-203ENST00000539896 CASC1Q6TDU7 716 aa12.58□□□□□ -0.4
PTAFR-203ENST00000539896 GZF1Q9H116 711 aaPredicted RBP12.58□□□□□ -0.4
PTAFR-203ENST00000539896 USP47Q96K76 1375 aa12.57□□□□□ -0.4
PTAFR-203ENST00000539896 CHMP4BQ9H444 224 aaKnown RBP12.57□□□□□ -0.4
PTAFR-203ENST00000539896 POGKQ9P215 609 aa12.57□□□□□ -0.4
PTAFR-203ENST00000539896 FGD6Q6ZV73 1430 aa12.56□□□□□ -0.4
PTAFR-203ENST00000539896 UACAQ9BZF9 1416 aa12.56□□□□□ -0.4
PTAFR-203ENST00000539896 KIF7Q2M1P5 1343 aa12.56□□□□□ -0.4
PTAFR-203ENST00000539896 TPRNQ4KMQ1 711 aa12.56□□□□□ -0.4
PTAFR-203ENST00000539896 DNTTIP2Q5QJE6 756 aaKnown RBP12.56□□□□□ -0.4
PTAFR-203ENST00000539896 CCDC146Q8IYE0 955 aa12.56□□□□□ -0.4
PTAFR-203ENST00000539896 LRRC9Q6ZRR7 1453 aa12.56□□□□□ -0.4
PTAFR-203ENST00000539896 HNRNPMP52272 730 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTAFR-203ENST00000539896 RWDD1Q9H446 243 aaPredicted RBP12.55□□□□□ -0.4
PTAFR-203ENST00000539896 CRBNQ96SW2 442 aa12.55□□□□□ -0.4
PTAFR-203ENST00000539896 PANK3Q9H999 370 aa12.54□□□□□ -0.4
PTAFR-203ENST00000539896 CLUAP1Q96AJ1 413 aa12.54□□□□□ -0.4
PTAFR-203ENST00000539896 U2AF1L5P0DN76 240 aaPredicted RBP12.54□□□□□ -0.4
PTAFR-203ENST00000539896 U2AF1Q01081 240 aaKnown RBP eCLIP12.54□□□□□ -0.4
PTAFR-203ENST00000539896 PRDM2Q13029 1718 aa12.53□□□□□ -0.4
PTAFR-203ENST00000539896 CNTLNQ9NXG0 1405 aa12.53□□□□□ -0.4
PTAFR-203ENST00000539896 SAFB2Q14151 953 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTAFR-203ENST00000539896 CENPQQ7L2Z9 268 aaPredicted RBP12.52□□□□□ -0.41
PTAFR-203ENST00000539896 FAM161AQ3B820 660 aa12.52□□□□□ -0.41
PTAFR-203ENST00000539896 PNNQ9H307 717 aaKnown RBP12.52□□□□□ -0.41
PTAFR-203ENST00000539896 CARMIL2Q6F5E8 1435 aa12.52□□□□□ -0.41
PTAFR-203ENST00000539896 PMFBP1Q8TBY8 1022 aa12.51□□□□□ -0.41
PTAFR-203ENST00000539896 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
PTAFR-203ENST00000539896 GSE1Q14687 1217 aa12.51□□□□□ -0.41
PTAFR-203ENST00000539896 PDS5BQ9NTI5 1447 aa12.51□□□□□ -0.41
PTAFR-203ENST00000539896 KANK1Q14678 1352 aa12.51□□□□□ -0.41
PTAFR-203ENST00000539896 SRPK2P78362 688 aaKnown RBP12.51□□□□□ -0.41
PTAFR-203ENST00000539896 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
PTAFR-203ENST00000539896 SYNJ1O43426 1573 aa12.5□□□□□ -0.41
PTAFR-203ENST00000539896 CENPJQ9HC77 1338 aaPredicted RBP12.5□□□□□ -0.41
PTAFR-203ENST00000539896 MFAP1P55081 439 aaKnown RBP12.5□□□□□ -0.41
PTAFR-203ENST00000539896 PLCB2Q00722 1185 aa12.5□□□□□ -0.41
PTAFR-203ENST00000539896 IPO8O15397 1037 aaKnown RBP12.49□□□□□ -0.41
PTAFR-203ENST00000539896 ITPRIPQ8IWB1 547 aa12.49□□□□□ -0.41
PTAFR-203ENST00000539896 MYOM3Q5VTT5 1437 aa12.49□□□□□ -0.41
PTAFR-203ENST00000539896 GBP4Q96PP9 640 aa12.48□□□□□ -0.41
PTAFR-203ENST00000539896 ARID4BQ4LE39 1312 aaPredicted RBP12.48□□□□□ -0.41
PTAFR-203ENST00000539896 GOLGA6L3A6NEY3 463 aa12.48□□□□□ -0.41
PTAFR-203ENST00000539896 MSNP26038 577 aaKnown RBP12.48□□□□□ -0.41
PTAFR-203ENST00000539896 FGD5Q6ZNL6 1462 aa12.47□□□□□ -0.41
PTAFR-203ENST00000539896 C14orf37Q86TY3 774 aa12.47□□□□□ -0.41
PTAFR-203ENST00000539896 ERICH3Q5RHP9 1530 aa12.47□□□□□ -0.41
PTAFR-203ENST00000539896 PLEKHG5O94827 1062 aa12.47□□□□□ -0.41
PTAFR-203ENST00000539896 CCDC184Q52MB2 194 aa12.47□□□□□ -0.41
PTAFR-203ENST00000539896 EFCAB2Q5VUJ9 269 aa12.47□□□□□ -0.41
PTAFR-203ENST00000539896 ZNF644Q9H582 1327 aaPredicted RBP12.47□□□□□ -0.41
PTAFR-203ENST00000539896 ERCC6Q03468 1493 aa12.47□□□□□ -0.41
PTAFR-203ENST00000539896 PRXQ9BXM0 1461 aa12.47□□□□□ -0.41
PTAFR-203ENST00000539896 SMC4Q9NTJ3 1288 aa12.46□□□□□ -0.41
PTAFR-203ENST00000539896 ZBTB7CA1YPR0 619 aa12.46□□□□□ -0.42
PTAFR-203ENST00000539896 PAK3O75914 559 aaPredicted RBP12.46□□□□□ -0.42
PTAFR-203ENST00000539896 RSPH4AQ5TD94 716 aa12.45□□□□□ -0.42
PTAFR-203ENST00000539896 GGT6Q6P531 493 aa12.45□□□□□ -0.42
PTAFR-203ENST00000539896 STK26Q9P289 416 aa12.45□□□□□ -0.42
PTAFR-203ENST00000539896 FANCD2Q9BXW9 1451 aa12.45□□□□□ -0.42
PTAFR-203ENST00000539896 CCDC144AA2RUR9 1427 aa12.45□□□□□ -0.42
PTAFR-203ENST00000539896 WDR97A6NE52 1622 aa12.45□□□□□ -0.42
PTAFR-203ENST00000539896 APAF1O14727 1248 aa12.45□□□□□ -0.42
PTAFR-203ENST00000539896 RRP7AQ9Y3A4 280 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms