RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 GCC2Q8IWJ2 1684 aa23.34■■□□□ 1.33
C2CD3-213ENST00000539061 THOC2Q8NI27 1593 aaKnown RBP23.34■■□□□ 1.33
C2CD3-213ENST00000539061 UGGT2Q9NYU1 1516 aa23.33■■□□□ 1.33
C2CD3-213ENST00000539061 RTL5Q5HYW3 569 aaPredicted RBP23.33■■□□□ 1.33
C2CD3-213ENST00000539061 RNF123Q5XPI4 1314 aa23.33■■□□□ 1.33
C2CD3-213ENST00000539061 NUDCQ9Y266 331 aa23.33■■□□□ 1.33
C2CD3-213ENST00000539061 ZBTB47Q9UFB7 747 aaPredicted RBP23.32■■□□□ 1.32
C2CD3-213ENST00000539061 KIF7Q2M1P5 1343 aa23.32■■□□□ 1.32
C2CD3-213ENST00000539061 ERCC6Q03468 1493 aa23.32■■□□□ 1.32
C2CD3-213ENST00000539061 TCOF1Q13428 1488 aaKnown RBP23.32■■□□□ 1.32
C2CD3-213ENST00000539061 LRRIQ1Q96JM4 1722 aa23.32■■□□□ 1.32
C2CD3-213ENST00000539061 ARHGEF11O15085 1522 aa23.3■■□□□ 1.32
C2CD3-213ENST00000539061 TDRD9Q8NDG6 1382 aaKnown RBP23.3■■□□□ 1.32
C2CD3-213ENST00000539061 SAMD9Q5K651 1589 aa23.3■■□□□ 1.32
C2CD3-213ENST00000539061 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
C2CD3-213ENST00000539061 NBPF8Q3BBV2 869 aa23.28■■□□□ 1.32
C2CD3-213ENST00000539061 SPATA31E1Q6ZUB1 1445 aa23.27■■□□□ 1.32
C2CD3-213ENST00000539061 ABCA5Q8WWZ7 1642 aa23.27■■□□□ 1.32
C2CD3-213ENST00000539061 KDM6BO15054 1643 aa23.25■■□□□ 1.31
C2CD3-213ENST00000539061 FOXD1Q16676 465 aa23.24■■□□□ 1.31
C2CD3-213ENST00000539061 RPRD2Q5VT52 1461 aaKnown RBP23.24■■□□□ 1.31
C2CD3-213ENST00000539061 ANKRD30BQ9BXX2 1392 aa23.22■■□□□ 1.31
C2CD3-213ENST00000539061 POLR1AO95602 1720 aaPredicted RBP23.22■■□□□ 1.31
C2CD3-213ENST00000539061 TEX14Q8IWB6 1497 aa23.2■■□□□ 1.3
C2CD3-213ENST00000539061 MAGI3Q5TCQ9 1506 aa23.2■■□□□ 1.3
C2CD3-213ENST00000539061 PRKCSHP14314 528 aaPredicted RBP23.19■■□□□ 1.3
C2CD3-213ENST00000539061 DHX29Q7Z478 1369 aaKnown RBP23.18■■□□□ 1.3
C2CD3-213ENST00000539061 MIA2Q96PC5 1412 aa23.18■■□□□ 1.3
C2CD3-213ENST00000539061 TARBP1Q13395 1621 aaKnown RBP23.14■■□□□ 1.29
C2CD3-213ENST00000539061 WDR62O43379 1518 aa23.13■■□□□ 1.29
C2CD3-213ENST00000539061 GAPVD1Q14C86 1478 aa23.13■■□□□ 1.29
C2CD3-213ENST00000539061 PNISRQ8TF01 805 aaKnown RBP23.1■■□□□ 1.29
C2CD3-213ENST00000539061 ROCK1Q13464 1354 aa23.09■■□□□ 1.29
C2CD3-213ENST00000539061 CNGB1Q14028 1251 aaPredicted RBP23.09■■□□□ 1.29
C2CD3-213ENST00000539061 SLC4A1APQ9BWU0 796 aaKnown RBP23.09■■□□□ 1.29
C2CD3-213ENST00000539061 TCERG1O14776 1098 aaKnown RBP23.08■■□□□ 1.28
C2CD3-213ENST00000539061 ARID4BQ4LE39 1312 aaPredicted RBP23.07■■□□□ 1.28
C2CD3-213ENST00000539061 TMC1Q8TDI8 760 aa23.07■■□□□ 1.28
C2CD3-213ENST00000539061 ANO8Q9HCE9 1232 aaPredicted RBP23.07■■□□□ 1.28
C2CD3-213ENST00000539061 USP35Q9P2H5 1018 aa23.06■■□□□ 1.28
C2CD3-213ENST00000539061 ZNF608Q9ULD9 1512 aaPredicted RBP23.06■■□□□ 1.28
C2CD3-213ENST00000539061 POLR3GLQ9BT43 218 aa23.05■■□□□ 1.28
C2CD3-213ENST00000539061 EPRSP07814 1512 aaKnown RBP23.03■■□□□ 1.28
C2CD3-213ENST00000539061 NPM2Q86SE8 214 aaKnown RBP23.03■■□□□ 1.28
C2CD3-213ENST00000539061 USP47Q96K76 1375 aa23.03■■□□□ 1.28
C2CD3-213ENST00000539061 DAPK1P53355 1430 aa23.02■■□□□ 1.28
C2CD3-213ENST00000539061 RRP1P56182 461 aaKnown RBP23.01■■□□□ 1.27
C2CD3-213ENST00000539061 IL27Q8NEV9 243 aa23.01■■□□□ 1.27
C2CD3-213ENST00000539061 IFT140Q96RY7 1462 aa23■■□□□ 1.27
C2CD3-213ENST00000539061 ROCK2O75116 1388 aaKnown RBP23■■□□□ 1.27
C2CD3-213ENST00000539061 PDE4AP27815 886 aa23■■□□□ 1.27
C2CD3-213ENST00000539061 NEFMP07197 916 aa22.99■■□□□ 1.27
C2CD3-213ENST00000539061 SENP3-EIF4A1A0A087X0R7 540 aa22.99■■□□□ 1.27
C2CD3-213ENST00000539061 MS4A1P11836 297 aa22.98■■□□□ 1.27
C2CD3-213ENST00000539061 BCORL1Q5H9F3 1711 aa22.98■■□□□ 1.27
C2CD3-213ENST00000539061 SALL2Q9Y467 1007 aaPredicted RBP22.97■■□□□ 1.27
C2CD3-213ENST00000539061 EXOC6Q8TAG9 804 aa22.97■■□□□ 1.27
C2CD3-213ENST00000539061 LRPPRCP42704 1394 aaKnown RBP22.97■■□□□ 1.27
C2CD3-213ENST00000539061 ABCC5O15440 1437 aa22.97■■□□□ 1.27
C2CD3-213ENST00000539061 MBD5Q9P267 1494 aa22.96■■□□□ 1.27
C2CD3-213ENST00000539061 PPM1GO15355 546 aaPredicted RBP22.96■■□□□ 1.27
C2CD3-213ENST00000539061 BACH2Q9BYV9 841 aa22.96■■□□□ 1.27
C2CD3-213ENST00000539061 LAS1LQ9Y4W2 734 aaKnown RBP22.96■■□□□ 1.27
C2CD3-213ENST00000539061 CDK13Q14004 1512 aaKnown RBP22.95■■□□□ 1.26
C2CD3-213ENST00000539061 KIF15Q9NS87 1388 aa22.94■■□□□ 1.26
C2CD3-213ENST00000539061 RCAN3Q9UKA8 241 aa22.94■■□□□ 1.26
C2CD3-213ENST00000539061 BRD4O60885 1362 aaPredicted RBP22.93■■□□□ 1.26
C2CD3-213ENST00000539061 DNMT1P26358 1616 aaKnown RBP22.93■■□□□ 1.26
C2CD3-213ENST00000539061 ZNF326Q5BKZ1 582 aaKnown RBP22.93■■□□□ 1.26
C2CD3-213ENST00000539061 PBRM1Q86U86 1689 aa22.92■■□□□ 1.26
C2CD3-213ENST00000539061 KTN1Q86UP2 1357 aaKnown RBP22.91■■□□□ 1.26
C2CD3-213ENST00000539061 WASHC2CQ9Y4E1 1318 aa22.91■■□□□ 1.26
C2CD3-213ENST00000539061 PZPP20742 1482 aa22.9■■□□□ 1.26
C2CD3-213ENST00000539061 KDM5CP41229 1560 aa22.9■■□□□ 1.26
C2CD3-213ENST00000539061 MYBBP1AQ9BQG0 1328 aaKnown RBP22.9■■□□□ 1.26
C2CD3-213ENST00000539061 RALBP1Q15311 655 aa22.89■■□□□ 1.26
C2CD3-213ENST00000539061 KIF14Q15058 1648 aa22.88■■□□□ 1.25
C2CD3-213ENST00000539061 RTN4Q9NQC3 1192 aaKnown RBP22.88■■□□□ 1.25
C2CD3-213ENST00000539061 ARID3CA6NKF2 412 aa22.87■■□□□ 1.25
C2CD3-213ENST00000539061 PDE3BQ13370 1112 aa22.87■■□□□ 1.25
C2CD3-213ENST00000539061 KIAA1107Q9UPP5 1409 aa22.87■■□□□ 1.25
C2CD3-213ENST00000539061 ZNF644Q9H582 1327 aaPredicted RBP22.86■■□□□ 1.25
C2CD3-213ENST00000539061 EIF4G3O43432 1585 aaKnown RBP22.85■■□□□ 1.25
C2CD3-213ENST00000539061 DDRGK1Q96HY6 314 aa22.85■■□□□ 1.25
C2CD3-213ENST00000539061 CARD11Q9BXL7 1154 aa22.82■■□□□ 1.24
C2CD3-213ENST00000539061 UHRF1BP1Q6BDS2 1440 aa22.82■■□□□ 1.24
C2CD3-213ENST00000539061 IQGAP2Q13576 1575 aa22.81■■□□□ 1.24
C2CD3-213ENST00000539061 RALGAPBQ86X10 1494 aa22.81■■□□□ 1.24
C2CD3-213ENST00000539061 PKD2Q13563 968 aa22.8■■□□□ 1.24
C2CD3-213ENST00000539061 ADAMTS12P58397 1594 aa22.79■■□□□ 1.24
C2CD3-213ENST00000539061 FBLN2P98095 1184 aa22.78■■□□□ 1.24
C2CD3-213ENST00000539061 NLRP13Q86W25 1043 aa22.77■■□□□ 1.24
C2CD3-213ENST00000539061 ST20-MTHFSA0A0A6YYL1 179 aa22.75■■□□□ 1.23
C2CD3-213ENST00000539061 GSE1Q14687 1217 aa22.75■■□□□ 1.23
C2CD3-213ENST00000539061 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
C2CD3-213ENST00000539061 CDCA7LQ96GN5 454 aa22.7■■□□□ 1.22
C2CD3-213ENST00000539061 ARHGEF12Q9NZN5 1544 aa22.7■■□□□ 1.22
C2CD3-213ENST00000539061 NFKBIBQ15653 356 aa22.69■■□□□ 1.22
C2CD3-213ENST00000539061 PARD3Q8TEW0 1356 aa22.69■■□□□ 1.22
C2CD3-213ENST00000539061 CFDP1Q9UEE9 299 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms