RNA–Protein interactions for RNA: ENST00000538971.6

ERC1-208, Transcript of ELKS/RAB6-interacting/CAST family member 1, human

TSL 2

Gene ERC1, Length 2,267 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERC1-208	ENST00000538971	TOP2B	Q02880	1626 aa		10.69	□□□□□ -0.7
ERC1-208	ENST00000538971	RGS22	Q8NE09	1264 aa		10.69	□□□□□ -0.7
ERC1-208	ENST00000538971	RAD54L2	Q9Y4B4	1467 aa		10.69	□□□□□ -0.7
ERC1-208	ENST00000538971	RBM25	P49756	843 aa	Known RBP	10.68	□□□□□ -0.7
ERC1-208	ENST00000538971	TARBP1	Q13395	1621 aa	Known RBP	10.67	□□□□□ -0.7
ERC1-208	ENST00000538971	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.67	□□□□□ -0.7
ERC1-208	ENST00000538971	AEBP1	Q8IUX7	1158 aa		10.67	□□□□□ -0.7
ERC1-208	ENST00000538971	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.67	□□□□□ -0.7
ERC1-208	ENST00000538971	CEP162	Q5TB80	1403 aa		10.66	□□□□□ -0.7
ERC1-208	ENST00000538971	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.65	□□□□□ -0.7	2e-6	■■■□□ 17.5
ERC1-208	ENST00000538971	TNIK	Q9UKE5	1360 aa		10.65	□□□□□ -0.7
ERC1-208	ENST00000538971	IFT140	Q96RY7	1462 aa		10.65	□□□□□ -0.7
ERC1-208	ENST00000538971	CADPS2	Q86UW7	1296 aa		10.64	□□□□□ -0.71
ERC1-208	ENST00000538971	SOGA1	O94964	1423 aa		10.64	□□□□□ -0.71
ERC1-208	ENST00000538971	EIF4G3	O43432	1585 aa	Known RBP	10.63	□□□□□ -0.71
ERC1-208	ENST00000538971	WDR97	A6NE52	1622 aa		10.63	□□□□□ -0.71
ERC1-208	ENST00000538971	MYT1L	Q9UL68	1186 aa		10.63	□□□□□ -0.71
ERC1-208	ENST00000538971	STK25	O00506	426 aa		10.61	□□□□□ -0.71
ERC1-208	ENST00000538971	AQR	O60306	1485 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
ERC1-208	ENST00000538971	SEMA3E	O15041	775 aa		10.61	□□□□□ -0.71
ERC1-208	ENST00000538971	EEA1	Q15075	1411 aa		10.61	□□□□□ -0.71
ERC1-208	ENST00000538971	TDRD9	Q8NDG6	1382 aa	Known RBP	10.6	□□□□□ -0.71
ERC1-208	ENST00000538971	HSP90B1	P14625	803 aa	Known RBP	10.6	□□□□□ -0.71
ERC1-208	ENST00000538971	ZMYND10	O75800	440 aa		10.59	□□□□□ -0.71
ERC1-208	ENST00000538971	POLA2	Q14181	598 aa		10.58	□□□□□ -0.72
ERC1-208	ENST00000538971	ABCA10	Q8WWZ4	1543 aa		10.58	□□□□□ -0.72
ERC1-208	ENST00000538971	WDR70	Q9NW82	654 aa		10.57	□□□□□ -0.72
ERC1-208	ENST00000538971	ABCA5	Q8WWZ7	1642 aa		10.56	□□□□□ -0.72
ERC1-208	ENST00000538971	PBRM1	Q86U86	1689 aa		10.55	□□□□□ -0.72
ERC1-208	ENST00000538971	CLUAP1	Q96AJ1	413 aa		10.55	□□□□□ -0.72
ERC1-208	ENST00000538971	KDM4C	Q9H3R0	1056 aa		10.55	□□□□□ -0.72
ERC1-208	ENST00000538971	MFAP1	P55081	439 aa	Known RBP	10.54	□□□□□ -0.72
ERC1-208	ENST00000538971	RBM19	Q9Y4C8	960 aa	Known RBP	10.54	□□□□□ -0.72
ERC1-208	ENST00000538971	GAPVD1	Q14C86	1478 aa		10.53	□□□□□ -0.72
ERC1-208	ENST00000538971	TMCO4	Q5TGY1	634 aa		10.53	□□□□□ -0.72
ERC1-208	ENST00000538971	SNAPC4	Q5SXM2	1469 aa		10.51	□□□□□ -0.73
ERC1-208	ENST00000538971	DCAF8L1	A6NGE4	600 aa		10.5	□□□□□ -0.73
ERC1-208	ENST00000538971	GZF1	Q9H116	711 aa	Predicted RBP	10.5	□□□□□ -0.73
ERC1-208	ENST00000538971	FANCI	Q9NVI1	1328 aa		10.5	□□□□□ -0.73
ERC1-208	ENST00000538971	CHD1	O14646	1710 aa		10.5	□□□□□ -0.73
ERC1-208	ENST00000538971	GRIN2B	Q13224	1484 aa		10.49	□□□□□ -0.73
ERC1-208	ENST00000538971	GOLGA3	Q08378	1498 aa		10.49	□□□□□ -0.73
ERC1-208	ENST00000538971	RUSC2	Q8N2Y8	1516 aa		10.49	□□□□□ -0.73
ERC1-208	ENST00000538971	HMGB1	P09429	215 aa	Known RBP	10.49	□□□□□ -0.73
ERC1-208	ENST00000538971	PUS7	Q96PZ0	661 aa	Known RBP	10.49	□□□□□ -0.73
ERC1-208	ENST00000538971	RIOK3	O14730	519 aa	Known RBP	10.48	□□□□□ -0.73
ERC1-208	ENST00000538971	MSH5	O43196	834 aa		10.47	□□□□□ -0.73
ERC1-208	ENST00000538971	DHX37	Q8IY37	1157 aa	Known RBP	10.47	□□□□□ -0.73
ERC1-208	ENST00000538971	TESPA1	A2RU30	521 aa	Predicted RBP	10.46	□□□□□ -0.73
ERC1-208	ENST00000538971	TRAIP	Q9BWF2	469 aa		10.46	□□□□□ -0.73
ERC1-208	ENST00000538971	KIF27	Q86VH2	1401 aa		10.46	□□□□□ -0.73
ERC1-208	ENST00000538971	NEFL	P07196	543 aa		10.46	□□□□□ -0.74
ERC1-208	ENST00000538971	MAGI1	Q96QZ7	1491 aa	Predicted RBP	10.45	□□□□□ -0.74
ERC1-208	ENST00000538971	ADAMTS12	P58397	1594 aa		10.45	□□□□□ -0.74
ERC1-208	ENST00000538971	USP35	Q9P2H5	1018 aa		10.45	□□□□□ -0.74
ERC1-208	ENST00000538971	ERICH3	Q5RHP9	1530 aa		10.44	□□□□□ -0.74
ERC1-208	ENST00000538971	FAM117A	Q9C073	453 aa		10.44	□□□□□ -0.74
ERC1-208	ENST00000538971	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.44	□□□□□ -0.74
ERC1-208	ENST00000538971	STK24	Q9Y6E0	443 aa		10.44	□□□□□ -0.74
ERC1-208	ENST00000538971	DHX57	Q6P158	1386 aa	Known RBP	10.43	□□□□□ -0.74
ERC1-208	ENST00000538971	BARGIN	Q6ZT62	677 aa		10.43	□□□□□ -0.74
ERC1-208	ENST00000538971	STAG3	Q9UJ98	1225 aa		10.42	□□□□□ -0.74
ERC1-208	ENST00000538971	SYNJ2	O15056	1496 aa		10.42	□□□□□ -0.74
ERC1-208	ENST00000538971	TRAK2	O60296	914 aa		10.41	□□□□□ -0.74
ERC1-208	ENST00000538971	VPS8	Q8N3P4	1428 aa		10.41	□□□□□ -0.74
ERC1-208	ENST00000538971	IGF1R	P08069	1367 aa		10.41	□□□□□ -0.74
ERC1-208	ENST00000538971	KIF21B	O75037	1637 aa		10.41	□□□□□ -0.74
ERC1-208	ENST00000538971	RETREG2	Q8NC44	543 aa		10.41	□□□□□ -0.74
ERC1-208	ENST00000538971	ERICH6B	Q5W0A0	696 aa		10.4	□□□□□ -0.74
ERC1-208	ENST00000538971	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.4	□□□□□ -0.74
ERC1-208	ENST00000538971	CUL7	Q14999	1698 aa		10.4	□□□□□ -0.75
ERC1-208	ENST00000538971	IRF5	Q13568	498 aa		10.4	□□□□□ -0.75
ERC1-208	ENST00000538971	AK7	Q96M32	723 aa		10.39	□□□□□ -0.75
ERC1-208	ENST00000538971	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.39	□□□□□ -0.75
ERC1-208	ENST00000538971	FHAD1	B1AJZ9	1412 aa		10.39	□□□□□ -0.75
ERC1-208	ENST00000538971	GRIN2A	Q12879	1464 aa		10.39	□□□□□ -0.75
ERC1-208	ENST00000538971	OSCAR	Q8IYS5	282 aa		10.37	□□□□□ -0.75
ERC1-208	ENST00000538971	ONECUT3	O60422	494 aa	Predicted RBP	10.37	□□□□□ -0.75
ERC1-208	ENST00000538971	ARHGEF1	Q92888	912 aa	Known RBP	10.37	□□□□□ -0.75
ERC1-208	ENST00000538971	CEP170	Q5SW79	1584 aa		10.36	□□□□□ -0.75
ERC1-208	ENST00000538971	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.36	□□□□□ -0.75
ERC1-208	ENST00000538971	PDE4D	Q08499	809 aa		10.36	□□□□□ -0.75
ERC1-208	ENST00000538971	ZFP91	Q96JP5	570 aa	Predicted RBP	10.36	□□□□□ -0.75
ERC1-208	ENST00000538971	CARMIL1	Q5VZK9	1371 aa		10.35	□□□□□ -0.75
ERC1-208	ENST00000538971		E9PSI1	815 aa		10.35	□□□□□ -0.75
ERC1-208	ENST00000538971	CLIP1	P30622	1438 aa		10.35	□□□□□ -0.75
ERC1-208	ENST00000538971	CCER2	I3L3R5	266 aa		10.34	□□□□□ -0.75
ERC1-208	ENST00000538971	CLASP1	Q7Z460	1538 aa		10.33	□□□□□ -0.76
ERC1-208	ENST00000538971	PLEKHG3	A1L390	1219 aa		10.33	□□□□□ -0.76
ERC1-208	ENST00000538971	DEK	P35659	375 aa	Known RBP	10.33	□□□□□ -0.76
ERC1-208	ENST00000538971	KRI1	Q8N9T8	703 aa	Known RBP	10.33	□□□□□ -0.76
ERC1-208	ENST00000538971	FBXW7	Q969H0	707 aa		10.32	□□□□□ -0.76
ERC1-208	ENST00000538971	TRIM66	O15016	1216 aa		10.32	□□□□□ -0.76
ERC1-208	ENST00000538971	FLII	Q13045	1269 aa		10.32	□□□□□ -0.76
ERC1-208	ENST00000538971	NUP160	Q12769	1436 aa		10.31	□□□□□ -0.76
ERC1-208	ENST00000538971	VGF	O15240	615 aa	Predicted RBP	10.31	□□□□□ -0.76
ERC1-208	ENST00000538971	POLR3GL	Q9BT43	218 aa		10.31	□□□□□ -0.76
ERC1-208	ENST00000538971	RAPGEF2	Q9Y4G8	1499 aa		10.3	□□□□□ -0.76
ERC1-208	ENST00000538971	RBM26	Q5T8P6	1007 aa	Known RBP	10.3	□□□□□ -0.76
ERC1-208	ENST00000538971	PRX	Q9BXM0	1461 aa		10.3	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms