RNA–Protein interactions for RNA: ENST00000538957.1

SCNN1A-211, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 566 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-211ENST00000538957 NUP153P49790 1475 aaKnown RBP20.69■□□□□ 0.9
SCNN1A-211ENST00000538957 HECW1Q76N89 1606 aa20.64■□□□□ 0.89
SCNN1A-211ENST00000538957 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.63■□□□□ 0.89
SCNN1A-211ENST00000538957 SIGLEC1Q9BZZ2 1709 aa20.63■□□□□ 0.89
SCNN1A-211ENST00000538957 UHRF1BP1Q6BDS2 1440 aa20.62■□□□□ 0.89
SCNN1A-211ENST00000538957 C9orf84Q5VXU9 1444 aa20.61■□□□□ 0.89
SCNN1A-211ENST00000538957 MYT1LQ9UL68 1186 aa20.6■□□□□ 0.89
SCNN1A-211ENST00000538957 ATP10AO60312 1499 aa20.6■□□□□ 0.89
SCNN1A-211ENST00000538957 SCAPERQ9BY12 1400 aa20.6■□□□□ 0.89
SCNN1A-211ENST00000538957 ARHGEF12Q9NZN5 1544 aa20.59■□□□□ 0.89
SCNN1A-211ENST00000538957 CEBPAP49715 358 aaPredicted RBP20.59■□□□□ 0.89
SCNN1A-211ENST00000538957 STRCQ7RTU9 1775 aa20.55■□□□□ 0.88
SCNN1A-211ENST00000538957 CSRNP3Q8WYN3 585 aa20.55■□□□□ 0.88
SCNN1A-211ENST00000538957 ESF1Q9H501 851 aaKnown RBP20.55■□□□□ 0.88
SCNN1A-211ENST00000538957 SETD1BQ9UPS6 1966 aaKnown RBP20.54■□□□□ 0.88
SCNN1A-211ENST00000538957 PLCH2O75038 1416 aa20.52■□□□□ 0.87
SCNN1A-211ENST00000538957 EFCAB2Q5VUJ9 269 aa20.51■□□□□ 0.87
SCNN1A-211ENST00000538957 PTPRTO14522 1441 aa20.51■□□□□ 0.87
SCNN1A-211ENST00000538957 ATP1B4Q9UN42 357 aaPredicted RBP20.48■□□□□ 0.87
SCNN1A-211ENST00000538957 MYO5CQ9NQX4 1742 aa20.47■□□□□ 0.87
SCNN1A-211ENST00000538957 CDK13Q14004 1512 aaKnown RBP20.47■□□□□ 0.87
SCNN1A-211ENST00000538957 ZNF518AQ6AHZ1 1483 aa20.46■□□□□ 0.87
SCNN1A-211ENST00000538957 IQSEC2Q5JU85 1478 aa20.45■□□□□ 0.86
SCNN1A-211ENST00000538957 CDK11AQ9UQ88 783 aaPredicted RBP20.44■□□□□ 0.86
SCNN1A-211ENST00000538957 ARHGAP5Q13017 1502 aa20.41■□□□□ 0.86
SCNN1A-211ENST00000538957 C3P01024 1663 aa20.4■□□□□ 0.86
SCNN1A-211ENST00000538957 AFAP1Q8N556 730 aa20.38■□□□□ 0.85
SCNN1A-211ENST00000538957 KIF14Q15058 1648 aa20.38■□□□□ 0.85
SCNN1A-211ENST00000538957 LTBP4Q8N2S1 1624 aa20.38■□□□□ 0.85
SCNN1A-211ENST00000538957 EEA1Q15075 1411 aa20.37■□□□□ 0.85
SCNN1A-211ENST00000538957 TRAPPC8Q9Y2L5 1435 aa20.37■□□□□ 0.85
SCNN1A-211ENST00000538957 UBAP1LF5GYI3 381 aa20.36■□□□□ 0.85
SCNN1A-211ENST00000538957 KDM5CP41229 1560 aa20.36■□□□□ 0.85
SCNN1A-211ENST00000538957 DIP2CQ9Y2E4 1556 aa20.36■□□□□ 0.85
SCNN1A-211ENST00000538957 CLIP1P30622 1438 aa20.36■□□□□ 0.85
SCNN1A-211ENST00000538957 NCOA1Q15788 1441 aa20.36■□□□□ 0.85
SCNN1A-211ENST00000538957 REREQ9P2R6 1566 aa20.34■□□□□ 0.85
SCNN1A-211ENST00000538957 CNTLNQ9NXG0 1405 aa20.33■□□□□ 0.84
SCNN1A-211ENST00000538957 FMN1Q68DA7 1419 aa20.31■□□□□ 0.84
SCNN1A-211ENST00000538957 CAMSAP1Q5T5Y3 1602 aa20.31■□□□□ 0.84
SCNN1A-211ENST00000538957 ABCA6Q8N139 1617 aa20.31■□□□□ 0.84
SCNN1A-211ENST00000538957 AGLP35573 1532 aa20.29■□□□□ 0.84
SCNN1A-211ENST00000538957 MLH3Q9UHC1 1453 aa20.28■□□□□ 0.84
SCNN1A-211ENST00000538957 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.84
SCNN1A-211ENST00000538957 TROQ12816 1431 aaPredicted RBP20.27■□□□□ 0.84
SCNN1A-211ENST00000538957 ZNF335Q9H4Z2 1342 aaPredicted RBP20.26■□□□□ 0.83
SCNN1A-211ENST00000538957 NCKAP5LQ9HCH0 1330 aa20.25■□□□□ 0.83
SCNN1A-211ENST00000538957 NPATQ14207 1427 aa20.24■□□□□ 0.83
SCNN1A-211ENST00000538957 SUPT6HQ7KZ85 1726 aaKnown RBP20.23■□□□□ 0.83
SCNN1A-211ENST00000538957 UBTFP17480 764 aaKnown RBP20.22■□□□□ 0.83
SCNN1A-211ENST00000538957 PKD2Q13563 968 aa20.22■□□□□ 0.83
SCNN1A-211ENST00000538957 EHMT2Q96KQ7 1210 aa20.21■□□□□ 0.83
SCNN1A-211ENST00000538957 MROH2AA6NES4 1674 aa20.2■□□□□ 0.82
SCNN1A-211ENST00000538957 ITSN2Q9NZM3 1697 aa20.2■□□□□ 0.82
SCNN1A-211ENST00000538957 CDC42BPBQ9Y5S2 1711 aa20.2■□□□□ 0.82
SCNN1A-211ENST00000538957 ABCC1P33527 1531 aa20.2■□□□□ 0.82
SCNN1A-211ENST00000538957 PREX2Q70Z35 1606 aa20.18■□□□□ 0.82
SCNN1A-211ENST00000538957 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
SCNN1A-211ENST00000538957 ZMYM3Q14202 1370 aa20.18■□□□□ 0.82
SCNN1A-211ENST00000538957 PIP4K2BP78356 416 aa20.16■□□□□ 0.82
SCNN1A-211ENST00000538957 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
SCNN1A-211ENST00000538957 KIDINS220Q9ULH0 1771 aa20.16■□□□□ 0.82
SCNN1A-211ENST00000538957 PLA2R1Q13018 1463 aa20.15■□□□□ 0.82
SCNN1A-211ENST00000538957 MED1Q15648 1581 aaPredicted RBP20.15■□□□□ 0.82
SCNN1A-211ENST00000538957 MYO3AQ8NEV4 1616 aa20.14■□□□□ 0.81
SCNN1A-211ENST00000538957 TOM1O60784 492 aa20.14■□□□□ 0.81
SCNN1A-211ENST00000538957 ZNF142P52746 1687 aaPredicted RBP20.13■□□□□ 0.81
SCNN1A-211ENST00000538957 ZNF777Q9ULD5 760 aaPredicted RBP20.13■□□□□ 0.81
SCNN1A-211ENST00000538957 CLTCQ00610 1675 aaKnown RBP20.12■□□□□ 0.81
SCNN1A-211ENST00000538957 CEP170BQ9Y4F5 1589 aaPredicted RBP20.12■□□□□ 0.81
SCNN1A-211ENST00000538957 SPAG9O60271 1321 aaKnown RBP20.11■□□□□ 0.81
SCNN1A-211ENST00000538957 HSPA1LP34931 641 aa20.11■□□□□ 0.81
SCNN1A-211ENST00000538957 ARHGAP35Q9NRY4 1499 aa20.11■□□□□ 0.81
SCNN1A-211ENST00000538957 TCOF1Q13428 1488 aaKnown RBP20.08■□□□□ 0.81
SCNN1A-211ENST00000538957 SAMD9LQ8IVG5 1584 aa20.08■□□□□ 0.8
SCNN1A-211ENST00000538957 CCDC18Q5T9S5 1454 aa20.07■□□□□ 0.8
SCNN1A-211ENST00000538957 GGT6Q6P531 493 aa20.07■□□□□ 0.8
SCNN1A-211ENST00000538957 LRRIQ1Q96JM4 1722 aa20.07■□□□□ 0.8
SCNN1A-211ENST00000538957 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
SCNN1A-211ENST00000538957 CDC42BPAQ5VT25 1732 aa20.05■□□□□ 0.8
SCNN1A-211ENST00000538957 CPS1P31327 1500 aa20.04■□□□□ 0.8
SCNN1A-211ENST00000538957 SYCP2Q9BX26 1530 aa20.04■□□□□ 0.8
SCNN1A-211ENST00000538957 PTPRKQ15262 1439 aa20.03■□□□□ 0.8
SCNN1A-211ENST00000538957 ATP7AQ04656 1500 aa20.02■□□□□ 0.8
SCNN1A-211ENST00000538957 A2MP01023 1474 aa20.02■□□□□ 0.8
SCNN1A-211ENST00000538957 HNRNPMP52272 730 aaKnown RBP eCLIP20.01■□□□□ 0.79
SCNN1A-211ENST00000538957 A2ML1A8K2U0 1454 aa20■□□□□ 0.79
SCNN1A-211ENST00000538957 POLR1AO95602 1720 aaPredicted RBP19.99■□□□□ 0.79
SCNN1A-211ENST00000538957 PLEKHH2Q8IVE3 1493 aa19.98■□□□□ 0.79
SCNN1A-211ENST00000538957 SHANK2Q9UPX8 1470 aa19.97■□□□□ 0.79
SCNN1A-211ENST00000538957 PLXNC1O60486 1568 aa19.96■□□□□ 0.79
SCNN1A-211ENST00000538957 CASKIN1Q8WXD9 1431 aa19.96■□□□□ 0.79
SCNN1A-211ENST00000538957 DNMT1P26358 1616 aaKnown RBP19.96■□□□□ 0.79
SCNN1A-211ENST00000538957 SENP3Q9H4L4 574 aaPredicted RBP19.96■□□□□ 0.79
SCNN1A-211ENST00000538957 CFDP1Q9UEE9 299 aaPredicted RBP19.95■□□□□ 0.78
SCNN1A-211ENST00000538957 INO80Q9ULG1 1556 aaPredicted RBP19.94■□□□□ 0.78
SCNN1A-211ENST00000538957 ADGBQ8N7X0 1667 aa19.94■□□□□ 0.78
SCNN1A-211ENST00000538957 ANKLE2Q86XL3 938 aa19.93■□□□□ 0.78
SCNN1A-211ENST00000538957 TNRQ92752 1358 aa19.92■□□□□ 0.78
SCNN1A-211ENST00000538957 CCNB3Q8WWL7 1395 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms