RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 ERICH3Q5RHP9 1530 aa8.39□□□□□ -1.07
LINC02408-202ENST00000538573 CARMIL1Q5VZK9 1371 aa8.39□□□□□ -1.07
LINC02408-202ENST00000538573 TIE1P35590 1138 aa8.39□□□□□ -1.07
LINC02408-202ENST00000538573 NUBP1P53384 320 aa8.39□□□□□ -1.07
LINC02408-202ENST00000538573 KLHL34Q8N239 644 aa8.39□□□□□ -1.07
LINC02408-202ENST00000538573 CUL7Q14999 1698 aa8.38□□□□□ -1.07
LINC02408-202ENST00000538573 UBTFP17480 764 aaKnown RBP8.38□□□□□ -1.07
LINC02408-202ENST00000538573 SGIP1Q9BQI5 828 aa8.38□□□□□ -1.07
LINC02408-202ENST00000538573 KIF21BO75037 1637 aa8.38□□□□□ -1.07
LINC02408-202ENST00000538573 BMP2KQ9NSY1 1161 aaPredicted RBP8.37□□□□□ -1.07
LINC02408-202ENST00000538573 PRXQ9BXM0 1461 aa8.37□□□□□ -1.07
LINC02408-202ENST00000538573 TRPC6Q9Y210 931 aa8.36□□□□□ -1.07
LINC02408-202ENST00000538573 GOLGA3Q08378 1498 aa8.36□□□□□ -1.07
LINC02408-202ENST00000538573 SNAPC4Q5SXM2 1469 aa8.36□□□□□ -1.07
LINC02408-202ENST00000538573 RAPGEF2Q9Y4G8 1499 aa8.36□□□□□ -1.07
LINC02408-202ENST00000538573 SEC24BO95487 1268 aa8.35□□□□□ -1.07
LINC02408-202ENST00000538573 FHAD1B1AJZ9 1412 aa8.35□□□□□ -1.07
LINC02408-202ENST00000538573 POTEJP0CG39 1038 aa8.34□□□□□ -1.07
LINC02408-202ENST00000538573 CHMP7Q8WUX9 453 aaPredicted RBP8.34□□□□□ -1.07
LINC02408-202ENST00000538573 ADAMTS12P58397 1594 aa8.34□□□□□ -1.07
LINC02408-202ENST00000538573 MAGI1Q96QZ7 1491 aaPredicted RBP8.33□□□□□ -1.08
LINC02408-202ENST00000538573 TTLL13PA6NNM8 815 aa8.32□□□□□ -1.08
LINC02408-202ENST00000538573 LCE2DQ5TA82 110 aaPredicted RBP8.32□□□□□ -1.08
LINC02408-202ENST00000538573 CDAN1Q8IWY9 1227 aa8.32□□□□□ -1.08
LINC02408-202ENST00000538573 RANGAP1P46060 587 aaPredicted RBP8.31□□□□□ -1.08
LINC02408-202ENST00000538573 TNIKQ9UKE5 1360 aa8.31□□□□□ -1.08
LINC02408-202ENST00000538573 SYNJ2O15056 1496 aa8.31□□□□□ -1.08
LINC02408-202ENST00000538573 IFNL1Q8IU54 200 aa8.3□□□□□ -1.08
LINC02408-202ENST00000538573 TRIM35Q9UPQ4 493 aa8.3□□□□□ -1.08
LINC02408-202ENST00000538573 PYGBP11216 843 aa8.29□□□□□ -1.08
LINC02408-202ENST00000538573 VASPP50552 380 aaPredicted RBP8.29□□□□□ -1.08
LINC02408-202ENST00000538573 TMEM106CQ9BVX2 250 aa8.29□□□□□ -1.08
LINC02408-202ENST00000538573 GRIN2AQ12879 1464 aa8.29□□□□□ -1.08
LINC02408-202ENST00000538573 CHD1O14646 1710 aa8.29□□□□□ -1.08
LINC02408-202ENST00000538573 CTTNBP2Q8WZ74 1663 aa8.27□□□□□ -1.08
LINC02408-202ENST00000538573 GSE1Q14687 1217 aa8.27□□□□□ -1.09
LINC02408-202ENST00000538573 IER5LQ5T953 404 aa8.25□□□□□ -1.09
LINC02408-202ENST00000538573 CEP162Q5TB80 1403 aa8.25□□□□□ -1.09
LINC02408-202ENST00000538573 CEP170Q5SW79 1584 aa8.24□□□□□ -1.09
LINC02408-202ENST00000538573 CLIP1P30622 1438 aa8.23□□□□□ -1.09
LINC02408-202ENST00000538573 POTEFA5A3E0 1075 aa8.23□□□□□ -1.09
LINC02408-202ENST00000538573 PLCG2P16885 1265 aa8.23□□□□□ -1.09
LINC02408-202ENST00000538573 KIAA0586Q9BVV6 1533 aa8.23□□□□□ -1.09
LINC02408-202ENST00000538573 NUP160Q12769 1436 aa8.22□□□□□ -1.09
LINC02408-202ENST00000538573 P3H3Q8IVL6 736 aa8.22□□□□□ -1.09
LINC02408-202ENST00000538573 COLQQ9Y215 455 aaPredicted RBP8.22□□□□□ -1.09
LINC02408-202ENST00000538573 IQGAP2Q13576 1575 aa8.22□□□□□ -1.09
LINC02408-202ENST00000538573 PCDHB8Q9UN66 801 aa8.21□□□□□ -1.1
LINC02408-202ENST00000538573 JPH4Q96JJ6 628 aa8.2□□□□□ -1.1
LINC02408-202ENST00000538573 GOLGA2Q08379 1002 aa8.19□□□□□ -1.1
LINC02408-202ENST00000538573 ZNF467Q7Z7K2 595 aaPredicted RBP8.19□□□□□ -1.1
LINC02408-202ENST00000538573 CIZ1Q9ULV3 898 aaPredicted RBP8.18□□□□□ -1.1
LINC02408-202ENST00000538573 ARHGAP35Q9NRY4 1499 aa8.18□□□□□ -1.1
LINC02408-202ENST00000538573 SPOCK2Q92563 424 aa8.17□□□□□ -1.1
LINC02408-202ENST00000538573 TTBK1Q5TCY1 1321 aaPredicted RBP8.17□□□□□ -1.1
LINC02408-202ENST00000538573 EFCAB5A4FU69 1503 aa8.17□□□□□ -1.1
LINC02408-202ENST00000538573 UGGT2Q9NYU1 1516 aa8.17□□□□□ -1.1
LINC02408-202ENST00000538573 SLAIN1Q8ND83 568 aa8.16□□□□□ -1.1
LINC02408-202ENST00000538573 SAMD9Q5K651 1589 aa8.15□□□□□ -1.1
LINC02408-202ENST00000538573 CLASP1Q7Z460 1538 aa8.15□□□□□ -1.1
LINC02408-202ENST00000538573 ARAP1Q96P48 1450 aa8.15□□□□□ -1.1
LINC02408-202ENST00000538573 FHOD3Q2V2M9 1422 aa8.15□□□□□ -1.1
LINC02408-202ENST00000538573 CARMIL2Q6F5E8 1435 aa8.15□□□□□ -1.1
LINC02408-202ENST00000538573 PRG4Q92954 1404 aaPredicted RBP8.15□□□□□ -1.1
LINC02408-202ENST00000538573 OCEL1Q9H607 264 aa8.15□□□□□ -1.1
LINC02408-202ENST00000538573 MKRN3Q13064 507 aaKnown RBP8.14□□□□□ -1.11
LINC02408-202ENST00000538573 DISP1Q96F81 1524 aa8.13□□□□□ -1.11
LINC02408-202ENST00000538573 ST18O60284 1047 aa8.13□□□□□ -1.11
LINC02408-202ENST00000538573 ATP1B4Q9UN42 357 aaPredicted RBP8.13□□□□□ -1.11
LINC02408-202ENST00000538573 KIAA0556O60303 1618 aa8.13□□□□□ -1.11
LINC02408-202ENST00000538573 SHROOM2Q13796 1616 aa8.13□□□□□ -1.11
LINC02408-202ENST00000538573 VPS8Q8N3P4 1428 aa8.12□□□□□ -1.11
LINC02408-202ENST00000538573 CHRM1P11229 460 aaPredicted RBP8.12□□□□□ -1.11
LINC02408-202ENST00000538573 IRX5P78411 483 aaPredicted RBP8.12□□□□□ -1.11
LINC02408-202ENST00000538573 MMRN1Q13201 1228 aa8.12□□□□□ -1.11
LINC02408-202ENST00000538573 IFNLR1Q8IU57 520 aaPredicted RBP8.12□□□□□ -1.11
LINC02408-202ENST00000538573 FMN1Q68DA7 1419 aa8.11□□□□□ -1.11
LINC02408-202ENST00000538573 ERCC6L2Q5T890 1561 aa8.1□□□□□ -1.11
LINC02408-202ENST00000538573 PSEN1P49768 467 aa8.1□□□□□ -1.11
LINC02408-202ENST00000538573 SNPHO15079 494 aa8.09□□□□□ -1.11
LINC02408-202ENST00000538573 SLC24A1O60721 1099 aa8.09□□□□□ -1.11
LINC02408-202ENST00000538573 SPNS2Q8IVW8 549 aa8.09□□□□□ -1.11
LINC02408-202ENST00000538573 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.09□□□□□ -1.11
LINC02408-202ENST00000538573 PTPRGP23470 1445 aa8.09□□□□□ -1.11
LINC02408-202ENST00000538573 PPARGC1BQ86YN6 1023 aaKnown RBP8.08□□□□□ -1.12
LINC02408-202ENST00000538573 TMEM121BQ9BXQ6 578 aaPredicted RBP8.08□□□□□ -1.12
LINC02408-202ENST00000538573 PCF11O94913 1555 aaKnown RBP8.07□□□□□ -1.12
LINC02408-202ENST00000538573 PDAP1Q13442 181 aaKnown RBP8.07□□□□□ -1.12
LINC02408-202ENST00000538573 CASKIN1Q8WXD9 1431 aa8.06□□□□□ -1.12
LINC02408-202ENST00000538573 ARID3CA6NKF2 412 aa8.06□□□□□ -1.12
LINC02408-202ENST00000538573 L3MBTL3Q96JM7 780 aaPredicted RBP8.06□□□□□ -1.12
LINC02408-202ENST00000538573 RAPGEF6Q8TEU7 1601 aa8.06□□□□□ -1.12
LINC02408-202ENST00000538573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.05□□□□□ -1.12
LINC02408-202ENST00000538573 PLB1Q6P1J6 1458 aa8.05□□□□□ -1.12
LINC02408-202ENST00000538573 FYCO1Q9BQS8 1478 aa8.05□□□□□ -1.12
LINC02408-202ENST00000538573 HECW1Q76N89 1606 aa8.03□□□□□ -1.12
LINC02408-202ENST00000538573 G3V3G9 751 aa8.03□□□□□ -1.12
LINC02408-202ENST00000538573 C3orf67Q6ZVT6 689 aa8.03□□□□□ -1.12
LINC02408-202ENST00000538573 LRRIQ1Q96JM4 1722 aa8.03□□□□□ -1.12
LINC02408-202ENST00000538573 ARHGEF11O15085 1522 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms