RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 HSPA1LP34931 641 aa17.5■□□□□ 0.39
PRKAB1-204ENST00000538271 MLECQ14165 292 aa17.49■□□□□ 0.39
PRKAB1-204ENST00000538271 UHRF1BP1Q6BDS2 1440 aa17.48■□□□□ 0.39
PRKAB1-204ENST00000538271 EHMT2Q96KQ7 1210 aa17.48■□□□□ 0.39
PRKAB1-204ENST00000538271 SETD1BQ9UPS6 1966 aaKnown RBP17.48■□□□□ 0.39
PRKAB1-204ENST00000538271 KIAA0556O60303 1618 aa17.47■□□□□ 0.39
PRKAB1-204ENST00000538271 CEBPAP49715 358 aaPredicted RBP17.46■□□□□ 0.39
PRKAB1-204ENST00000538271 ABCA9Q8IUA7 1624 aa17.46■□□□□ 0.39
PRKAB1-204ENST00000538271 UGGT2Q9NYU1 1516 aa17.46■□□□□ 0.39
PRKAB1-204ENST00000538271 AKNAQ7Z591 1439 aa17.45■□□□□ 0.38
PRKAB1-204ENST00000538271 CARMIL1Q5VZK9 1371 aa17.43■□□□□ 0.38
PRKAB1-204ENST00000538271 RICTORQ6R327 1708 aa17.41■□□□□ 0.38
PRKAB1-204ENST00000538271 ABCA8O94911 1581 aa17.4■□□□□ 0.38
PRKAB1-204ENST00000538271 ARHGEF12Q9NZN5 1544 aa17.4■□□□□ 0.38
PRKAB1-204ENST00000538271 KIF27Q86VH2 1401 aa17.39■□□□□ 0.38
PRKAB1-204ENST00000538271 ZNF335Q9H4Z2 1342 aaPredicted RBP17.38■□□□□ 0.37
PRKAB1-204ENST00000538271 DENND4BO75064 1496 aaPredicted RBP17.37■□□□□ 0.37
PRKAB1-204ENST00000538271 NCOA1Q15788 1441 aa17.36■□□□□ 0.37
PRKAB1-204ENST00000538271 FHOD3Q2V2M9 1422 aa17.36■□□□□ 0.37
PRKAB1-204ENST00000538271 ZFYVE16Q7Z3T8 1539 aa17.36■□□□□ 0.37
PRKAB1-204ENST00000538271 EFCAB5A4FU69 1503 aa17.34■□□□□ 0.37
PRKAB1-204ENST00000538271 PIP4K2BP78356 416 aa17.34■□□□□ 0.37
PRKAB1-204ENST00000538271 ZMYM4Q5VZL5 1548 aa17.32■□□□□ 0.36
PRKAB1-204ENST00000538271 RGS17Q9UGC6 210 aaPredicted RBP17.31■□□□□ 0.36
PRKAB1-204ENST00000538271 ARID3CA6NKF2 412 aa17.28■□□□□ 0.36
PRKAB1-204ENST00000538271 MAGI2Q86UL8 1455 aa17.28■□□□□ 0.36
PRKAB1-204ENST00000538271 ATP10BO94823 1461 aa17.26■□□□□ 0.35
PRKAB1-204ENST00000538271 TOM1O60784 492 aa17.25■□□□□ 0.35
PRKAB1-204ENST00000538271 CAMSAP1Q5T5Y3 1602 aa17.22■□□□□ 0.35
PRKAB1-204ENST00000538271 HECW1Q76N89 1606 aa17.22■□□□□ 0.35
PRKAB1-204ENST00000538271 C3P01024 1663 aa17.21■□□□□ 0.35
PRKAB1-204ENST00000538271 NCKAP5LQ9HCH0 1330 aa17.21■□□□□ 0.34
PRKAB1-204ENST00000538271 ATP10AO60312 1499 aa17.19■□□□□ 0.34
PRKAB1-204ENST00000538271 TRAPPC8Q9Y2L5 1435 aa17.19■□□□□ 0.34
PRKAB1-204ENST00000538271 C9orf84Q5VXU9 1444 aa17.18■□□□□ 0.34
PRKAB1-204ENST00000538271 GOLGA3Q08378 1498 aa17.18■□□□□ 0.34
PRKAB1-204ENST00000538271 CFAP74Q9C0B2 1584 aa17.17■□□□□ 0.34
PRKAB1-204ENST00000538271 POTEAQ6S8J7 498 aa17.15■□□□□ 0.34
PRKAB1-204ENST00000538271 SRCAPQ6ZRS2 3230 aa17.14■□□□□ 0.33
PRKAB1-204ENST00000538271 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
PRKAB1-204ENST00000538271 SETD1AO15047 1707 aaKnown RBP17.13■□□□□ 0.33
PRKAB1-204ENST00000538271 RAPGEF2Q9Y4G8 1499 aa17.11■□□□□ 0.33
PRKAB1-204ENST00000538271 PKD2Q13563 968 aa17.1■□□□□ 0.33
PRKAB1-204ENST00000538271 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
PRKAB1-204ENST00000538271 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
PRKAB1-204ENST00000538271 CPS1P31327 1500 aa17.06■□□□□ 0.32
PRKAB1-204ENST00000538271 PTPRKQ15262 1439 aa17.06■□□□□ 0.32
PRKAB1-204ENST00000538271 PLA2R1Q13018 1463 aa17.05■□□□□ 0.32
PRKAB1-204ENST00000538271 TCOF1Q13428 1488 aaKnown RBP17.05■□□□□ 0.32
PRKAB1-204ENST00000538271 CTTNBP2Q8WZ74 1663 aa17.05■□□□□ 0.32
PRKAB1-204ENST00000538271 SCAPERQ9BY12 1400 aa17.04■□□□□ 0.32
PRKAB1-204ENST00000538271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.04■□□□□ 0.32
PRKAB1-204ENST00000538271 HNRNPUL2Q1KMD3 747 aaKnown RBP17.04■□□□□ 0.32
PRKAB1-204ENST00000538271 FAM9AQ8IZU1 332 aaPredicted RBP17.03■□□□□ 0.32
PRKAB1-204ENST00000538271 UPF1Q92900 1129 aaKnown RBP eCLIP17.03■□□□□ 0.32
PRKAB1-204ENST00000538271 ESF1Q9H501 851 aaKnown RBP17.02■□□□□ 0.32
PRKAB1-204ENST00000538271 SUPT6HQ7KZ85 1726 aaKnown RBP17■□□□□ 0.31
PRKAB1-204ENST00000538271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17■□□□□ 0.31
PRKAB1-204ENST00000538271 NPATQ14207 1427 aa16.99■□□□□ 0.31
PRKAB1-204ENST00000538271 SHANK2Q9UPX8 1470 aa16.98■□□□□ 0.31
PRKAB1-204ENST00000538271 ZNF142P52746 1687 aaPredicted RBP16.96■□□□□ 0.31
PRKAB1-204ENST00000538271 AGLP35573 1532 aa16.96■□□□□ 0.3
PRKAB1-204ENST00000538271 RAPGEF6Q8TEU7 1601 aa16.95■□□□□ 0.3
PRKAB1-204ENST00000538271 CNTLNQ9NXG0 1405 aa16.95■□□□□ 0.3
PRKAB1-204ENST00000538271 CAPN15O75808 1086 aa16.94■□□□□ 0.3
PRKAB1-204ENST00000538271 REREQ9P2R6 1566 aa16.94■□□□□ 0.3
PRKAB1-204ENST00000538271 P3H3Q8IVL6 736 aa16.93■□□□□ 0.3
PRKAB1-204ENST00000538271 PLEKHD1A6NEE1 506 aa16.92■□□□□ 0.3
PRKAB1-204ENST00000538271 DIP2CQ9Y2E4 1556 aa16.92■□□□□ 0.3
PRKAB1-204ENST00000538271 CEP170BQ9Y4F5 1589 aaPredicted RBP16.91■□□□□ 0.3
PRKAB1-204ENST00000538271 MYO3AQ8NEV4 1616 aa16.91■□□□□ 0.3
PRKAB1-204ENST00000538271 NUP153P49790 1475 aaKnown RBP16.89■□□□□ 0.29
PRKAB1-204ENST00000538271 SLC4A2P04920 1241 aa16.89■□□□□ 0.29
PRKAB1-204ENST00000538271 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
PRKAB1-204ENST00000538271 MROH2AA6NES4 1674 aa16.88■□□□□ 0.29
PRKAB1-204ENST00000538271 ZBTB22O15209 634 aa16.88■□□□□ 0.29
PRKAB1-204ENST00000538271 ZMYM3Q14202 1370 aa16.87■□□□□ 0.29
PRKAB1-204ENST00000538271 PLCH2O75038 1416 aa16.87■□□□□ 0.29
PRKAB1-204ENST00000538271 ZNF518AQ6AHZ1 1483 aa16.86■□□□□ 0.29
PRKAB1-204ENST00000538271 KDM5CP41229 1560 aa16.86■□□□□ 0.29
PRKAB1-204ENST00000538271 VWDEQ8N2E2 1590 aa16.85■□□□□ 0.29
PRKAB1-204ENST00000538271 DSG3P32926 999 aa16.85■□□□□ 0.29
PRKAB1-204ENST00000538271 MYT1LQ9UL68 1186 aa16.85■□□□□ 0.29
PRKAB1-204ENST00000538271 ABCA6Q8N139 1617 aa16.85■□□□□ 0.29
PRKAB1-204ENST00000538271 AFAP1Q8N556 730 aa16.84■□□□□ 0.29
PRKAB1-204ENST00000538271 NEURL4Q96JN8 1562 aa16.84■□□□□ 0.29
PRKAB1-204ENST00000538271 POLR1AO95602 1720 aaPredicted RBP16.83■□□□□ 0.28
PRKAB1-204ENST00000538271 RNF17Q9BXT8 1623 aaKnown RBP16.82■□□□□ 0.28
PRKAB1-204ENST00000538271 SUPT5HO00267 1087 aaKnown RBP16.82■□□□□ 0.28
PRKAB1-204ENST00000538271 APLP2Q06481 763 aa16.82■□□□□ 0.28
PRKAB1-204ENST00000538271 EFCAB2Q5VUJ9 269 aa16.8■□□□□ 0.28
PRKAB1-204ENST00000538271 POTEHQ6S545 545 aa16.8■□□□□ 0.28
PRKAB1-204ENST00000538271 LRRC7Q96NW7 1537 aa16.78■□□□□ 0.28
PRKAB1-204ENST00000538271 DNMT1P26358 1616 aaKnown RBP16.78■□□□□ 0.28
PRKAB1-204ENST00000538271 MLH3Q9UHC1 1453 aa16.76■□□□□ 0.27
PRKAB1-204ENST00000538271 TRIM52Q96A61 297 aa16.75■□□□□ 0.27
PRKAB1-204ENST00000538271 STRCP1A6NGW2 1772 aa16.74■□□□□ 0.27
PRKAB1-204ENST00000538271 A2ML1A8K2U0 1454 aa16.74■□□□□ 0.27
PRKAB1-204ENST00000538271 FOXD4L1Q9NU39 408 aa16.74■□□□□ 0.27
PRKAB1-204ENST00000538271 MYO5CQ9NQX4 1742 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 215.1 ms