RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 IER5LQ5T953 404 aa10.23□□□□□ -0.77
DDB1-210ENST00000538129 C7P10643 843 aa10.22□□□□□ -0.77
DDB1-210ENST00000538129 ATN1P54259 1190 aaPredicted RBP10.22□□□□□ -0.77
DDB1-210ENST00000538129 RYDENQ9NUL5 291 aaKnown RBP10.22□□□□□ -0.77
DDB1-210ENST00000538129 SOX12O15370 315 aa10.2□□□□□ -0.78
DDB1-210ENST00000538129 SEC24BO95487 1268 aa10.2□□□□□ -0.78
DDB1-210ENST00000538129 CUX1P39880 1505 aa10.2□□□□□ -0.78
DDB1-210ENST00000538129 IFT140Q96RY7 1462 aa10.2□□□□□ -0.78
DDB1-210ENST00000538129 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.19□□□□□ -0.78
DDB1-210ENST00000538129 WRNQ14191 1432 aaPredicted RBP eCLIP10.18□□□□□ -0.78
DDB1-210ENST00000538129 POLA1P09884 1462 aaPredicted RBP10.17□□□□□ -0.78
DDB1-210ENST00000538129 SOGA1O94964 1423 aa10.17□□□□□ -0.78
DDB1-210ENST00000538129 FGD5Q6ZNL6 1462 aa10.16□□□□□ -0.78
DDB1-210ENST00000538129 PLCG2P16885 1265 aa10.15□□□□□ -0.78
DDB1-210ENST00000538129 EFCAB3Q8N7B9 438 aa10.15□□□□□ -0.78
DDB1-210ENST00000538129 BBXQ8WY36 941 aaPredicted RBP10.15□□□□□ -0.78
DDB1-210ENST00000538129 TARBP1Q13395 1621 aaKnown RBP10.15□□□□□ -0.79
DDB1-210ENST00000538129 POTEIP0CG38 1075 aa10.14□□□□□ -0.79
DDB1-210ENST00000538129 NLRP6P59044 892 aa10.14□□□□□ -0.79
DDB1-210ENST00000538129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.14□□□□□ -0.79
DDB1-210ENST00000538129 TOP2BQ02880 1626 aa10.14□□□□□ -0.79
DDB1-210ENST00000538129 RAD54L2Q9Y4B4 1467 aa10.13□□□□□ -0.79
DDB1-210ENST00000538129 OCEL1Q9H607 264 aa10.13□□□□□ -0.79
DDB1-210ENST00000538129 METRNQ9UJH8 293 aa10.13□□□□□ -0.79
DDB1-210ENST00000538129 BIVM-ERCC5R4GMW8 1640 aa10.13□□□□□ -0.79
DDB1-210ENST00000538129 G3V3G9 751 aa10.12□□□□□ -0.79
DDB1-210ENST00000538129 ZNF608Q9ULD9 1512 aaPredicted RBP10.12□□□□□ -0.79
DDB1-210ENST00000538129 SYNJ1O43426 1573 aa10.11□□□□□ -0.79
DDB1-210ENST00000538129 AQRO60306 1485 aaKnown RBP eCLIP10.1□□□□□ -0.791e-6■■■■□ 20.5
DDB1-210ENST00000538129 PELP1Q8IZL8 1130 aaKnown RBP10.09□□□□□ -0.79
DDB1-210ENST00000538129 TDRD9Q8NDG6 1382 aaKnown RBP10.09□□□□□ -0.79
DDB1-210ENST00000538129 WDR97A6NE52 1622 aa10.08□□□□□ -0.8
DDB1-210ENST00000538129 ABCA10Q8WWZ4 1543 aa10.07□□□□□ -0.8
DDB1-210ENST00000538129 L3MBTL3Q96JM7 780 aaPredicted RBP10.07□□□□□ -0.8
DDB1-210ENST00000538129 IRX5P78411 483 aaPredicted RBP10.06□□□□□ -0.8
DDB1-210ENST00000538129 EIF4G3O43432 1585 aaKnown RBP10.05□□□□□ -0.8
DDB1-210ENST00000538129 GAPVD1Q14C86 1478 aa10.04□□□□□ -0.8
DDB1-210ENST00000538129 SPRYD3Q8NCJ5 442 aa10.03□□□□□ -0.8
DDB1-210ENST00000538129 PHF8Q9UPP1 1060 aa10.03□□□□□ -0.8
DDB1-210ENST00000538129 GRIN2BQ13224 1484 aa10.03□□□□□ -0.8
DDB1-210ENST00000538129 MAMSTRQ6ZN01 415 aa10.01□□□□□ -0.81
DDB1-210ENST00000538129 MFRPQ9BY79 579 aa10.01□□□□□ -0.81
DDB1-210ENST00000538129 ABCA5Q8WWZ7 1642 aa10□□□□□ -0.81
DDB1-210ENST00000538129 ILDR1Q86SU0 546 aaPredicted RBP10□□□□□ -0.81
DDB1-210ENST00000538129 MAGI1Q96QZ7 1491 aaPredicted RBP9.99□□□□□ -0.81
DDB1-210ENST00000538129 KIF27Q86VH2 1401 aa9.99□□□□□ -0.81
DDB1-210ENST00000538129 CHMP7Q8WUX9 453 aaPredicted RBP9.98□□□□□ -0.81
DDB1-210ENST00000538129 COLQQ9Y215 455 aaPredicted RBP9.98□□□□□ -0.81
DDB1-210ENST00000538129 SNAPC4Q5SXM2 1469 aa9.98□□□□□ -0.81
DDB1-210ENST00000538129 PBRM1Q86U86 1689 aa9.97□□□□□ -0.81
DDB1-210ENST00000538129 PAXIP1Q6ZW49 1069 aaPredicted RBP9.97□□□□□ -0.81
DDB1-210ENST00000538129 PDCD7Q8N8D1 485 aaKnown RBP9.97□□□□□ -0.81
DDB1-210ENST00000538129 FBXO22Q8NEZ5 403 aa9.97□□□□□ -0.81
DDB1-210ENST00000538129 CFAP44Q96MT7 982 aa9.97□□□□□ -0.81
DDB1-210ENST00000538129 NKX1-1Q15270 411 aaPredicted RBP9.96□□□□□ -0.82
DDB1-210ENST00000538129 SCUBE2Q9NQ36 999 aa9.96□□□□□ -0.82
DDB1-210ENST00000538129 BOLA1Q9Y3E2 137 aa9.96□□□□□ -0.82
DDB1-210ENST00000538129 ERICH3Q5RHP9 1530 aa9.96□□□□□ -0.82
DDB1-210ENST00000538129 C3orf67Q6ZVT6 689 aa9.95□□□□□ -0.82
DDB1-210ENST00000538129 IGF1RP08069 1367 aa9.95□□□□□ -0.82
DDB1-210ENST00000538129 SYNJ2O15056 1496 aa9.95□□□□□ -0.82
DDB1-210ENST00000538129 FHAD1B1AJZ9 1412 aa9.93□□□□□ -0.82
DDB1-210ENST00000538129 GTPBP6O43824 516 aaPredicted RBP9.93□□□□□ -0.82
DDB1-210ENST00000538129 LHX8Q68G74 356 aa9.93□□□□□ -0.82
DDB1-210ENST00000538129 CHD1O14646 1710 aa9.93□□□□□ -0.82
DDB1-210ENST00000538129 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.92□□□□□ -0.82
DDB1-210ENST00000538129 POTEFA5A3E0 1075 aa9.91□□□□□ -0.82
DDB1-210ENST00000538129 MS4A4AQ96JQ5 239 aa9.91□□□□□ -0.82
DDB1-210ENST00000538129 DPY19L2Q6NUT2 758 aa9.9□□□□□ -0.82
DDB1-210ENST00000538129 ADAMTS12P58397 1594 aa9.89□□□□□ -0.83
DDB1-210ENST00000538129 RUSC2Q8N2Y8 1516 aa9.88□□□□□ -0.83
DDB1-210ENST00000538129 GRIN2AQ12879 1464 aa9.88□□□□□ -0.83
DDB1-210ENST00000538129 CARMIL1Q5VZK9 1371 aa9.88□□□□□ -0.83
DDB1-210ENST00000538129 PLCB2Q00722 1185 aa9.87□□□□□ -0.83
DDB1-210ENST00000538129 MICALL2Q8IY33 904 aa9.87□□□□□ -0.83
DDB1-210ENST00000538129 CUL7Q14999 1698 aa9.87□□□□□ -0.83
DDB1-210ENST00000538129 TMEM121BQ9BXQ6 578 aaPredicted RBP9.85□□□□□ -0.83
DDB1-210ENST00000538129 NUP160Q12769 1436 aa9.84□□□□□ -0.83
DDB1-210ENST00000538129 EEA1Q15075 1411 aa9.84□□□□□ -0.83
DDB1-210ENST00000538129 CLASP1Q7Z460 1538 aa9.83□□□□□ -0.84
DDB1-210ENST00000538129 PPP1R37O75864 691 aa9.83□□□□□ -0.84
DDB1-210ENST00000538129 TMC2Q8TDI7 906 aa9.82□□□□□ -0.84
DDB1-210ENST00000538129 CEP170Q5SW79 1584 aa9.81□□□□□ -0.84
DDB1-210ENST00000538129 RAPGEF2Q9Y4G8 1499 aa9.81□□□□□ -0.84
DDB1-210ENST00000538129 POTEB2H3BUK9 544 aa9.81□□□□□ -0.84
DDB1-210ENST00000538129 PDE4AP27815 886 aa9.8□□□□□ -0.84
DDB1-210ENST00000538129 JPH4Q96JJ6 628 aa9.8□□□□□ -0.84
DDB1-210ENST00000538129 PRXQ9BXM0 1461 aa9.79□□□□□ -0.84
DDB1-210ENST00000538129 SLAIN1Q8ND83 568 aa9.79□□□□□ -0.84
DDB1-210ENST00000538129 ARHGEF11O15085 1522 aa9.78□□□□□ -0.84
DDB1-210ENST00000538129 KIAA0586Q9BVV6 1533 aa9.78□□□□□ -0.84
DDB1-210ENST00000538129 FAM9AQ8IZU1 332 aaPredicted RBP9.78□□□□□ -0.84
DDB1-210ENST00000538129 SNPHO15079 494 aa9.77□□□□□ -0.85
DDB1-210ENST00000538129 RIMBP3CA6NJZ7 1639 aa9.77□□□□□ -0.85
DDB1-210ENST00000538129 RIMBP3BA6NNM3 1639 aa9.77□□□□□ -0.85
DDB1-210ENST00000538129 RIMBP3Q9UFD9 1639 aa9.77□□□□□ -0.85
DDB1-210ENST00000538129 HAP1P54257 671 aaPredicted RBP9.76□□□□□ -0.85
DDB1-210ENST00000538129 SHROOM2Q13796 1616 aa9.75□□□□□ -0.85
DDB1-210ENST00000538129 CYB5RLQ6IPT4 315 aa9.75□□□□□ -0.85
DDB1-210ENST00000538129 WDR70Q9NW82 654 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms