RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TONSLQ96HA7 1378 aa19.51■□□□□ 0.71
SMG6-203ENST00000536871 CAMSAP2Q08AD1 1489 aa19.5■□□□□ 0.71
SMG6-203ENST00000536871 RRP7BPQ9NSQ0 103 aa19.5■□□□□ 0.71
SMG6-203ENST00000536871 SIN3AQ96ST3 1273 aa19.5■□□□□ 0.71
SMG6-203ENST00000536871 NEUROD1Q13562 356 aa19.49■□□□□ 0.71
SMG6-203ENST00000536871 PPP1R15AO75807 674 aaPredicted RBP19.48■□□□□ 0.71
SMG6-203ENST00000536871 CHIC2Q9UKJ5 165 aa19.48■□□□□ 0.71
SMG6-203ENST00000536871 ABCC10Q5T3U5 1492 aa19.48■□□□□ 0.71
SMG6-203ENST00000536871 ADGRL2O95490 1459 aa19.47■□□□□ 0.71
SMG6-203ENST00000536871 SHANK2Q9UPX8 1470 aa19.45■□□□□ 0.7
SMG6-203ENST00000536871 ADGBQ8N7X0 1667 aa19.43■□□□□ 0.7
SMG6-203ENST00000536871 TRIM52Q96A61 297 aa19.43■□□□□ 0.7
SMG6-203ENST00000536871 ANKRD30AQ9BXX3 1397 aa19.42■□□□□ 0.7
SMG6-203ENST00000536871 RSPH4AQ5TD94 716 aa19.41■□□□□ 0.7
SMG6-203ENST00000536871 CLASP1Q7Z460 1538 aa19.41■□□□□ 0.7
SMG6-203ENST00000536871 NCOA1Q15788 1441 aa19.41■□□□□ 0.7
SMG6-203ENST00000536871 ABCC2Q92887 1545 aa19.4■□□□□ 0.7
SMG6-203ENST00000536871 ZNF644Q9H582 1327 aaPredicted RBP19.4■□□□□ 0.7
SMG6-203ENST00000536871 MPHOSPH9Q99550 1183 aa19.4■□□□□ 0.7
SMG6-203ENST00000536871 CROCC2H7BZ55 1655 aa19.4■□□□□ 0.7
SMG6-203ENST00000536871 MIER1Q8N108 512 aa19.39■□□□□ 0.7
SMG6-203ENST00000536871 CDC42BPAQ5VT25 1732 aa19.38■□□□□ 0.69
SMG6-203ENST00000536871 UHRF1BP1LA0JNW5 1464 aa19.37■□□□□ 0.69
SMG6-203ENST00000536871 ARHGEF5Q12774 1597 aa19.37■□□□□ 0.69
SMG6-203ENST00000536871 SCAF1Q9H7N4 1312 aaKnown RBP19.37■□□□□ 0.69
SMG6-203ENST00000536871 KDM6BO15054 1643 aa19.35■□□□□ 0.69
SMG6-203ENST00000536871 DENND4BO75064 1496 aaPredicted RBP19.34■□□□□ 0.69
SMG6-203ENST00000536871 TSPY4P0CV99 314 aa19.33■□□□□ 0.69
SMG6-203ENST00000536871 TSPY10P0CW01 314 aa19.33■□□□□ 0.69
SMG6-203ENST00000536871 ZNF777Q9ULD5 760 aaPredicted RBP19.33■□□□□ 0.69
SMG6-203ENST00000536871 PREX2Q70Z35 1606 aa19.32■□□□□ 0.68
SMG6-203ENST00000536871 PLEKHH2Q8IVE3 1493 aa19.32■□□□□ 0.68
SMG6-203ENST00000536871 C9orf84Q5VXU9 1444 aa19.31■□□□□ 0.68
SMG6-203ENST00000536871 ANKRD30BQ9BXX2 1392 aa19.29■□□□□ 0.68
SMG6-203ENST00000536871 ANKRD50Q9ULJ7 1429 aa19.29■□□□□ 0.68
SMG6-203ENST00000536871 RPRD2Q5VT52 1461 aaKnown RBP19.28■□□□□ 0.68
SMG6-203ENST00000536871 CCDC141Q6ZP82 1450 aa19.28■□□□□ 0.68
SMG6-203ENST00000536871 SLC4A1APQ9BWU0 796 aaKnown RBP19.28■□□□□ 0.68
SMG6-203ENST00000536871 KDM5BQ9UGL1 1544 aa19.27■□□□□ 0.67
SMG6-203ENST00000536871 KIAA1107Q9UPP5 1409 aa19.26■□□□□ 0.67
SMG6-203ENST00000536871 MBD5Q9P267 1494 aa19.26■□□□□ 0.67
SMG6-203ENST00000536871 PZPP20742 1482 aa19.24■□□□□ 0.67
SMG6-203ENST00000536871 ERCC6L2Q5T890 1561 aa19.24■□□□□ 0.67
SMG6-203ENST00000536871 KDM5DQ9BY66 1539 aa19.23■□□□□ 0.67
SMG6-203ENST00000536871 MAST1Q9Y2H9 1570 aa19.23■□□□□ 0.67
SMG6-203ENST00000536871 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.23■□□□□ 0.67
SMG6-203ENST00000536871 SAMD9LQ8IVG5 1584 aa19.22■□□□□ 0.67
SMG6-203ENST00000536871 CDC42BPBQ9Y5S2 1711 aa19.21■□□□□ 0.67
SMG6-203ENST00000536871 ARHGAP5Q13017 1502 aa19.2■□□□□ 0.66
SMG6-203ENST00000536871 KIF15Q9NS87 1388 aa19.19■□□□□ 0.66
SMG6-203ENST00000536871 MYO5CQ9NQX4 1742 aa19.19■□□□□ 0.66
SMG6-203ENST00000536871 ARAP3Q8WWN8 1544 aa19.18■□□□□ 0.66
SMG6-203ENST00000536871 ZCCHC11Q5TAX3 1644 aaKnown RBP19.18■□□□□ 0.66
SMG6-203ENST00000536871 TTC37Q6PGP7 1564 aa19.18■□□□□ 0.66
SMG6-203ENST00000536871 PLCH2O75038 1416 aa19.18■□□□□ 0.66
SMG6-203ENST00000536871 HNRNPMP52272 730 aaKnown RBP eCLIP19.16■□□□□ 0.662e-14■■■■■ 29.9
SMG6-203ENST00000536871 TEX14Q8IWB6 1497 aa19.16■□□□□ 0.66
SMG6-203ENST00000536871 L3MBTL2Q969R5 705 aa19.16■□□□□ 0.66
SMG6-203ENST00000536871 EFCAB2Q5VUJ9 269 aa19.15■□□□□ 0.66
SMG6-203ENST00000536871 NUP155O75694 1391 aa19.14■□□□□ 0.65
SMG6-203ENST00000536871 EIF4G2P78344 907 aaKnown RBP eCLIP19.14■□□□□ 0.65
SMG6-203ENST00000536871 PLXNC1O60486 1568 aa19.13■□□□□ 0.65
SMG6-203ENST00000536871 SYCP2Q9BX26 1530 aa19.13■□□□□ 0.65
SMG6-203ENST00000536871 DDX10Q13206 875 aaKnown RBP19.11■□□□□ 0.65
SMG6-203ENST00000536871 PKD2Q13563 968 aa19.11■□□□□ 0.65
SMG6-203ENST00000536871 YTHDC1Q96MU7 727 aaKnown RBP19.1■□□□□ 0.65
SMG6-203ENST00000536871 FOXD1Q16676 465 aa19.09■□□□□ 0.65
SMG6-203ENST00000536871 CCER2I3L3R5 266 aa19.07■□□□□ 0.64
SMG6-203ENST00000536871 DUOX2Q9NRD8 1548 aa19.07■□□□□ 0.64
SMG6-203ENST00000536871 WDR7Q9Y4E6 1490 aa19.07■□□□□ 0.64
SMG6-203ENST00000536871 ANP32CO43423 234 aa19.07■□□□□ 0.64
SMG6-203ENST00000536871 ERBINQ96RT1 1412 aa19.06■□□□□ 0.64
SMG6-203ENST00000536871 ARHGEF12Q9NZN5 1544 aa19.06■□□□□ 0.64
SMG6-203ENST00000536871 KCNH8Q96L42 1107 aa19.05■□□□□ 0.64
SMG6-203ENST00000536871 ABCC1P33527 1531 aa19.05■□□□□ 0.64
SMG6-203ENST00000536871 RTEL1-TNFRSF6BF6WH68 1400 aa19.05■□□□□ 0.64
SMG6-203ENST00000536871 UNC13BO14795 1591 aa19.05■□□□□ 0.64
SMG6-203ENST00000536871 HSPA5P11021 654 aaKnown RBP19.03■□□□□ 0.64
SMG6-203ENST00000536871 OSCARQ8IYS5 282 aa19.03■□□□□ 0.64
SMG6-203ENST00000536871 FAM135AQ9P2D6 1515 aa19.02■□□□□ 0.64
SMG6-203ENST00000536871 UHRF1BP1Q6BDS2 1440 aa19.01■□□□□ 0.63
SMG6-203ENST00000536871 MAGI2Q86UL8 1455 aa18.99■□□□□ 0.63
SMG6-203ENST00000536871 GTF3C3Q9Y5Q9 886 aa18.99■□□□□ 0.63
SMG6-203ENST00000536871 ABCA9Q8IUA7 1624 aa18.98■□□□□ 0.63
SMG6-203ENST00000536871 HIRIP3Q9BW71 556 aaPredicted RBP18.98■□□□□ 0.63
SMG6-203ENST00000536871 NBPF8Q3BBV2 869 aa18.97■□□□□ 0.63
SMG6-203ENST00000536871 IQGAP3Q86VI3 1631 aa18.97■□□□□ 0.63
SMG6-203ENST00000536871 SPATA31E1Q6ZUB1 1445 aa18.96■□□□□ 0.63
SMG6-203ENST00000536871 ARID4BQ4LE39 1312 aaPredicted RBP18.95■□□□□ 0.62
SMG6-203ENST00000536871 NPM1P06748 294 aaKnown RBP eCLIP18.94■□□□□ 0.62
SMG6-203ENST00000536871 ATP10AO60312 1499 aa18.94■□□□□ 0.62
SMG6-203ENST00000536871 WASHC2AQ641Q2 1341 aa18.94■□□□□ 0.62
SMG6-203ENST00000536871 SPAG9O60271 1321 aaKnown RBP18.93■□□□□ 0.62
SMG6-203ENST00000536871 CCDC144AA2RUR9 1427 aa18.93■□□□□ 0.62
SMG6-203ENST00000536871 RALGAPBQ86X10 1494 aa18.93■□□□□ 0.62
SMG6-203ENST00000536871 FANCAO15360 1455 aa18.92■□□□□ 0.62
SMG6-203ENST00000536871 ASXL2Q76L83 1435 aa18.92■□□□□ 0.62
SMG6-203ENST00000536871 TRAPPC8Q9Y2L5 1435 aa18.92■□□□□ 0.62
SMG6-203ENST00000536871 CCDC7Q96M83 1385 aa18.91■□□□□ 0.62
SMG6-203ENST00000536871 CNTLNQ9NXG0 1405 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms