RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 POGZQ7Z3K3 1410 aa9.04□□□□□ -0.96
CHD4-205ENST00000536301 RANGAP1P46060 587 aaPredicted RBP9.03□□□□□ -0.96
CHD4-205ENST00000536301 CFAP74Q9C0B2 1584 aa9.03□□□□□ -0.96
CHD4-205ENST00000536301 SCAPERQ9BY12 1400 aa9.01□□□□□ -0.97
CHD4-205ENST00000536301 SETD1BQ9UPS6 1966 aaKnown RBP9.01□□□□□ -0.97
CHD4-205ENST00000536301 CDK13Q14004 1512 aaKnown RBP9□□□□□ -0.97
CHD4-205ENST00000536301 PLEKHD1A6NEE1 506 aa9□□□□□ -0.97
CHD4-205ENST00000536301 LTBP4Q8N2S1 1624 aa9□□□□□ -0.97
CHD4-205ENST00000536301 MAGI2Q86UL8 1455 aa9□□□□□ -0.97
CHD4-205ENST00000536301 ATP10AO60312 1499 aa8.99□□□□□ -0.97
CHD4-205ENST00000536301 C9orf84Q5VXU9 1444 aa8.98□□□□□ -0.97
CHD4-205ENST00000536301 C3P01024 1663 aa8.97□□□□□ -0.97
CHD4-205ENST00000536301 UHRF1BP1Q6BDS2 1440 aa8.97□□□□□ -0.97
CHD4-205ENST00000536301 FAM9AQ8IZU1 332 aaPredicted RBP8.97□□□□□ -0.97
CHD4-205ENST00000536301 PLCH2O75038 1416 aa8.97□□□□□ -0.97
CHD4-205ENST00000536301 PTPRTO14522 1441 aa8.96□□□□□ -0.98
CHD4-205ENST00000536301 DIP2CQ9Y2E4 1556 aa8.95□□□□□ -0.98
CHD4-205ENST00000536301 KIF14Q15058 1648 aa8.95□□□□□ -0.98
CHD4-205ENST00000536301 CSRNP3Q8WYN3 585 aa8.95□□□□□ -0.98
CHD4-205ENST00000536301 MYO5CQ9NQX4 1742 aa8.94□□□□□ -0.98
CHD4-205ENST00000536301 DMRT2Q9Y5R5 561 aa8.94□□□□□ -0.98
CHD4-205ENST00000536301 ABCA6Q8N139 1617 aa8.94□□□□□ -0.98
CHD4-205ENST00000536301 AFAP1Q8N556 730 aa8.93□□□□□ -0.98
CHD4-205ENST00000536301 KDM5CP41229 1560 aa8.93□□□□□ -0.98
CHD4-205ENST00000536301 NCOA1Q15788 1441 aa8.92□□□□□ -0.98
CHD4-205ENST00000536301 IQSEC2Q5JU85 1478 aa8.9□□□□□ -0.98
CHD4-205ENST00000536301 ZNF335Q9H4Z2 1342 aaPredicted RBP8.9□□□□□ -0.98
CHD4-205ENST00000536301 EFCAB2Q5VUJ9 269 aa8.9□□□□□ -0.98
CHD4-205ENST00000536301 LRRIQ1Q96JM4 1722 aa8.9□□□□□ -0.98
CHD4-205ENST00000536301 CAMSAP1Q5T5Y3 1602 aa8.9□□□□□ -0.99
CHD4-205ENST00000536301 ZNF518AQ6AHZ1 1483 aa8.89□□□□□ -0.99
CHD4-205ENST00000536301 CDC42BPBQ9Y5S2 1711 aa8.89□□□□□ -0.99
CHD4-205ENST00000536301 NCKAP5LQ9HCH0 1330 aa8.89□□□□□ -0.99
CHD4-205ENST00000536301 REREQ9P2R6 1566 aa8.89□□□□□ -0.99
CHD4-205ENST00000536301 ARHGAP5Q13017 1502 aa8.89□□□□□ -0.99
CHD4-205ENST00000536301 TRAPPC8Q9Y2L5 1435 aa8.88□□□□□ -0.99
CHD4-205ENST00000536301 UBAP1LF5GYI3 381 aa8.88□□□□□ -0.99
CHD4-205ENST00000536301 MYT1LQ9UL68 1186 aa8.88□□□□□ -0.99
CHD4-205ENST00000536301 ATP1B4Q9UN42 357 aaPredicted RBP8.88□□□□□ -0.99
CHD4-205ENST00000536301 KIDINS220Q9ULH0 1771 aa8.87□□□□□ -0.99
CHD4-205ENST00000536301 AGLP35573 1532 aa8.87□□□□□ -0.99
CHD4-205ENST00000536301 ITSN2Q9NZM3 1697 aa8.86□□□□□ -0.99
CHD4-205ENST00000536301 MLH3Q9UHC1 1453 aa8.86□□□□□ -0.99
CHD4-205ENST00000536301 EHMT2Q96KQ7 1210 aa8.86□□□□□ -0.99
CHD4-205ENST00000536301 TROQ12816 1431 aaPredicted RBP8.86□□□□□ -0.99
CHD4-205ENST00000536301 MED1Q15648 1581 aaPredicted RBP8.86□□□□□ -0.99
CHD4-205ENST00000536301 ABCC1P33527 1531 aa8.85□□□□□ -0.99
CHD4-205ENST00000536301 ARHGAP35Q9NRY4 1499 aa8.84□□□□□ -0.99
CHD4-205ENST00000536301 HSPA1LP34931 641 aa8.84□□□□□ -0.99
CHD4-205ENST00000536301 PREX2Q70Z35 1606 aa8.83□□□□□ -1
CHD4-205ENST00000536301 MYO3AQ8NEV4 1616 aa8.83□□□□□ -1
CHD4-205ENST00000536301 MROH2AA6NES4 1674 aa8.83□□□□□ -1
CHD4-205ENST00000536301 CLTCQ00610 1675 aaKnown RBP8.83□□□□□ -1
CHD4-205ENST00000536301 SUPT6HQ7KZ85 1726 aaKnown RBP8.83□□□□□ -1
CHD4-205ENST00000536301 ZNF142P52746 1687 aaPredicted RBP8.82□□□□□ -1
CHD4-205ENST00000536301 ESF1Q9H501 851 aaKnown RBP8.82□□□□□ -1
CHD4-205ENST00000536301 ZMYM3Q14202 1370 aa8.82□□□□□ -1
CHD4-205ENST00000536301 TCOF1Q13428 1488 aaKnown RBP8.82□□□□□ -1
CHD4-205ENST00000536301 NPATQ14207 1427 aa8.81□□□□□ -1
CHD4-205ENST00000536301 CNTLNQ9NXG0 1405 aa8.81□□□□□ -1
CHD4-205ENST00000536301 CDC42BPAQ5VT25 1732 aa8.81□□□□□ -1
CHD4-205ENST00000536301 SAMD9LQ8IVG5 1584 aa8.81□□□□□ -1
CHD4-205ENST00000536301 CEP170BQ9Y4F5 1589 aaPredicted RBP8.81□□□□□ -1
CHD4-205ENST00000536301 EEA1Q15075 1411 aa8.8□□□□□ -1
CHD4-205ENST00000536301 PIP4K2BP78356 416 aa8.8□□□□□ -1
CHD4-205ENST00000536301 ALKQ9UM73 1620 aa8.8□□□□□ -1
CHD4-205ENST00000536301 PTPRKQ15262 1439 aa8.8□□□□□ -1
CHD4-205ENST00000536301 FMN1Q68DA7 1419 aa8.8□□□□□ -1
CHD4-205ENST00000536301 SCAF1Q9H7N4 1312 aaKnown RBP8.8□□□□□ -1
CHD4-205ENST00000536301 PLA2R1Q13018 1463 aa8.79□□□□□ -1
CHD4-205ENST00000536301 CLIP1P30622 1438 aa8.79□□□□□ -1
CHD4-205ENST00000536301 PPP6R1Q9UPN7 881 aa8.78□□□□□ -1
CHD4-205ENST00000536301 CDK11AQ9UQ88 783 aaPredicted RBP8.78□□□□□ -1
CHD4-205ENST00000536301 SYCP2Q9BX26 1530 aa8.78□□□□□ -1
CHD4-205ENST00000536301 NEURL4Q96JN8 1562 aa8.78□□□□□ -1
CHD4-205ENST00000536301 PKD2Q13563 968 aa8.77□□□□□ -1.01
CHD4-205ENST00000536301 PLXNC1O60486 1568 aa8.77□□□□□ -1.01
CHD4-205ENST00000536301 DNMT1P26358 1616 aaKnown RBP8.76□□□□□ -1.01
CHD4-205ENST00000536301 HNRNPMP52272 730 aaKnown RBP eCLIP8.76□□□□□ -1.01
CHD4-205ENST00000536301 SENP3Q9H4L4 574 aaPredicted RBP8.76□□□□□ -1.01
CHD4-205ENST00000536301 ZNF777Q9ULD5 760 aaPredicted RBP8.76□□□□□ -1.01
CHD4-205ENST00000536301 ATP7AQ04656 1500 aa8.75□□□□□ -1.01
CHD4-205ENST00000536301 POLR1AO95602 1720 aaPredicted RBP8.75□□□□□ -1.01
CHD4-205ENST00000536301 UBTFP17480 764 aaKnown RBP8.75□□□□□ -1.01
CHD4-205ENST00000536301 SPAG9O60271 1321 aaKnown RBP8.75□□□□□ -1.01
CHD4-205ENST00000536301 INO80Q9ULG1 1556 aaPredicted RBP8.74□□□□□ -1.01
CHD4-205ENST00000536301 GGT6Q6P531 493 aa8.74□□□□□ -1.01
CHD4-205ENST00000536301 A2ML1A8K2U0 1454 aa8.74□□□□□ -1.01
CHD4-205ENST00000536301 A2MP01023 1474 aa8.74□□□□□ -1.01
CHD4-205ENST00000536301 VWDEQ8N2E2 1590 aa8.73□□□□□ -1.01
CHD4-205ENST00000536301 STRCP1A6NGW2 1772 aa8.73□□□□□ -1.01
CHD4-205ENST00000536301 SHANK2Q9UPX8 1470 aa8.73□□□□□ -1.01
CHD4-205ENST00000536301 GPATCH8Q9UKJ3 1502 aaKnown RBP8.73□□□□□ -1.01
CHD4-205ENST00000536301 CPS1P31327 1500 aa8.72□□□□□ -1.01
CHD4-205ENST00000536301 FBXO31Q5XUX0 539 aaPredicted RBP8.72□□□□□ -1.01
CHD4-205ENST00000536301 PHF23Q9BUL5 403 aaPredicted RBP8.72□□□□□ -1.01
CHD4-205ENST00000536301 TOM1O60784 492 aa8.71□□□□□ -1.02
CHD4-205ENST00000536301 RGS17Q9UGC6 210 aaPredicted RBP8.71□□□□□ -1.02
CHD4-205ENST00000536301 CASKIN1Q8WXD9 1431 aa8.71□□□□□ -1.02
CHD4-205ENST00000536301 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms