RNA–Protein interactions for RNA: ENST00000534829.5

SSPN-203, Transcript of sarcospan, humanhuman

TSL 3

Gene SSPN, Length 380 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-203ENST00000534829 MAGI2Q86UL8 1455 aa17.17■□□□□ 0.34
SSPN-203ENST00000534829 HECW1Q76N89 1606 aa17.14■□□□□ 0.33
SSPN-203ENST00000534829 NCOA1Q15788 1441 aa17.13■□□□□ 0.33
SSPN-203ENST00000534829 CFAP74Q9C0B2 1584 aa17.13■□□□□ 0.33
SSPN-203ENST00000534829 HSPA1LP34931 641 aa17.1■□□□□ 0.33
SSPN-203ENST00000534829 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
SSPN-203ENST00000534829 C3P01024 1663 aa17.07■□□□□ 0.32
SSPN-203ENST00000534829 ATP10AO60312 1499 aa17.07■□□□□ 0.32
SSPN-203ENST00000534829 C9orf84Q5VXU9 1444 aa17.07■□□□□ 0.32
SSPN-203ENST00000534829 PHF23Q9BUL5 403 aaPredicted RBP17.04■□□□□ 0.32
SSPN-203ENST00000534829 RAPGEF6Q8TEU7 1601 aa17.03■□□□□ 0.32
SSPN-203ENST00000534829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.02■□□□□ 0.32
SSPN-203ENST00000534829 CAMSAP1Q5T5Y3 1602 aa17.01■□□□□ 0.31
SSPN-203ENST00000534829 TRAPPC8Q9Y2L5 1435 aa16.99■□□□□ 0.31
SSPN-203ENST00000534829 NUP153P49790 1475 aaKnown RBP16.99■□□□□ 0.31
SSPN-203ENST00000534829 SCAPERQ9BY12 1400 aa16.98■□□□□ 0.31
SSPN-203ENST00000534829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.98■□□□□ 0.31
SSPN-203ENST00000534829 HNRNPUL2Q1KMD3 747 aaKnown RBP16.98■□□□□ 0.31
SSPN-203ENST00000534829 P3H3Q8IVL6 736 aa16.98■□□□□ 0.31
SSPN-203ENST00000534829 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
SSPN-203ENST00000534829 PIP4K2BP78356 416 aa16.96■□□□□ 0.31
SSPN-203ENST00000534829 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.3
SSPN-203ENST00000534829 FAM9AQ8IZU1 332 aaPredicted RBP16.93■□□□□ 0.3
SSPN-203ENST00000534829 SAMD9Q5K651 1589 aa16.91■□□□□ 0.3
SSPN-203ENST00000534829 RGS17Q9UGC6 210 aaPredicted RBP16.9■□□□□ 0.3
SSPN-203ENST00000534829 REREQ9P2R6 1566 aa16.89■□□□□ 0.3
SSPN-203ENST00000534829 DIP2CQ9Y2E4 1556 aa16.89■□□□□ 0.3
SSPN-203ENST00000534829 TCOF1Q13428 1488 aaKnown RBP16.88■□□□□ 0.29
SSPN-203ENST00000534829 PLEKHD1A6NEE1 506 aa16.88■□□□□ 0.29
SSPN-203ENST00000534829 ALKQ9UM73 1620 aa16.88■□□□□ 0.29
SSPN-203ENST00000534829 PLA2R1Q13018 1463 aa16.87■□□□□ 0.29
SSPN-203ENST00000534829 KDM5CP41229 1560 aa16.87■□□□□ 0.29
SSPN-203ENST00000534829 TOM1O60784 492 aa16.87■□□□□ 0.29
SSPN-203ENST00000534829 PLCH2O75038 1416 aa16.87■□□□□ 0.29
SSPN-203ENST00000534829 AGLP35573 1532 aa16.86■□□□□ 0.29
SSPN-203ENST00000534829 ZNF142P52746 1687 aaPredicted RBP16.85■□□□□ 0.29
SSPN-203ENST00000534829 NPATQ14207 1427 aa16.85■□□□□ 0.29
SSPN-203ENST00000534829 ZNF518AQ6AHZ1 1483 aa16.85■□□□□ 0.29
SSPN-203ENST00000534829 ABCA6Q8N139 1617 aa16.85■□□□□ 0.29
SSPN-203ENST00000534829 PRXQ9BXM0 1461 aa16.84■□□□□ 0.29
SSPN-203ENST00000534829 PKD2Q13563 968 aa16.83■□□□□ 0.28
SSPN-203ENST00000534829 CNTLNQ9NXG0 1405 aa16.82■□□□□ 0.28
SSPN-203ENST00000534829 SUPT6HQ7KZ85 1726 aaKnown RBP16.82■□□□□ 0.28
SSPN-203ENST00000534829 MYO3AQ8NEV4 1616 aa16.81■□□□□ 0.28
SSPN-203ENST00000534829 CPS1P31327 1500 aa16.81■□□□□ 0.28
SSPN-203ENST00000534829 PPP6R1Q9UPN7 881 aa16.81■□□□□ 0.28
SSPN-203ENST00000534829 ESF1Q9H501 851 aaKnown RBP16.8■□□□□ 0.28
SSPN-203ENST00000534829 MROH2AA6NES4 1674 aa16.8■□□□□ 0.28
SSPN-203ENST00000534829 AFAP1Q8N556 730 aa16.79■□□□□ 0.28
SSPN-203ENST00000534829 CEP170BQ9Y4F5 1589 aaPredicted RBP16.79■□□□□ 0.28
SSPN-203ENST00000534829 MYO5CQ9NQX4 1742 aa16.78■□□□□ 0.28
SSPN-203ENST00000534829 SRCAPQ6ZRS2 3230 aa16.77■□□□□ 0.28
SSPN-203ENST00000534829 PTPRKQ15262 1439 aa16.76■□□□□ 0.27
SSPN-203ENST00000534829 SHANK2Q9UPX8 1470 aa16.75■□□□□ 0.27
SSPN-203ENST00000534829 SETD1AO15047 1707 aaKnown RBP16.75■□□□□ 0.27
SSPN-203ENST00000534829 MLH3Q9UHC1 1453 aa16.74■□□□□ 0.27
SSPN-203ENST00000534829 EFCAB2Q5VUJ9 269 aa16.74■□□□□ 0.27
SSPN-203ENST00000534829 POTEAQ6S8J7 498 aa16.74■□□□□ 0.27
SSPN-203ENST00000534829 SENP3Q9H4L4 574 aaPredicted RBP16.73■□□□□ 0.27
SSPN-203ENST00000534829 CDK13Q14004 1512 aaKnown RBP16.73■□□□□ 0.27
SSPN-203ENST00000534829 ZMYM3Q14202 1370 aa16.72■□□□□ 0.27
SSPN-203ENST00000534829 NEURL4Q96JN8 1562 aa16.72■□□□□ 0.27
SSPN-203ENST00000534829 MYT1LQ9UL68 1186 aa16.7■□□□□ 0.26
SSPN-203ENST00000534829 POLR1AO95602 1720 aaPredicted RBP16.7■□□□□ 0.26
SSPN-203ENST00000534829 VWDEQ8N2E2 1590 aa16.69■□□□□ 0.26
SSPN-203ENST00000534829 KIDINS220Q9ULH0 1771 aa16.66■□□□□ 0.26
SSPN-203ENST00000534829 ARHGAP5Q13017 1502 aa16.66■□□□□ 0.26
SSPN-203ENST00000534829 CLTCQ00610 1675 aaKnown RBP16.66■□□□□ 0.26
SSPN-203ENST00000534829 DNMT1P26358 1616 aaKnown RBP16.66■□□□□ 0.26
SSPN-203ENST00000534829 KIF14Q15058 1648 aa16.65■□□□□ 0.26
SSPN-203ENST00000534829 RNF17Q9BXT8 1623 aaKnown RBP16.63■□□□□ 0.25
SSPN-203ENST00000534829 A2ML1A8K2U0 1454 aa16.62■□□□□ 0.25
SSPN-203ENST00000534829 ABCC1P33527 1531 aa16.6■□□□□ 0.25
SSPN-203ENST00000534829 ITSN2Q9NZM3 1697 aa16.59■□□□□ 0.25
SSPN-203ENST00000534829 STRCP1A6NGW2 1772 aa16.59■□□□□ 0.25
SSPN-203ENST00000534829 CDC42BPBQ9Y5S2 1711 aa16.59■□□□□ 0.25
SSPN-203ENST00000534829 LRRC7Q96NW7 1537 aa16.58■□□□□ 0.24
SSPN-203ENST00000534829 RANGAP1P46060 587 aaPredicted RBP16.56■□□□□ 0.24
SSPN-203ENST00000534829 UPF1Q92900 1129 aaKnown RBP eCLIP16.56■□□□□ 0.24
SSPN-203ENST00000534829 SYNMO15061 1565 aa16.55■□□□□ 0.24
SSPN-203ENST00000534829 PLXNC1O60486 1568 aa16.52■□□□□ 0.24
SSPN-203ENST00000534829 MED14O60244 1454 aa16.51■□□□□ 0.23
SSPN-203ENST00000534829 PREX2Q70Z35 1606 aa16.51■□□□□ 0.23
SSPN-203ENST00000534829 SAMD9LQ8IVG5 1584 aa16.51■□□□□ 0.23
SSPN-203ENST00000534829 DEPDC5O75140 1603 aa16.5■□□□□ 0.23
SSPN-203ENST00000534829 NPHP4O75161 1426 aaPredicted RBP16.5■□□□□ 0.23
SSPN-203ENST00000534829 TROQ12816 1431 aaPredicted RBP16.49■□□□□ 0.23
SSPN-203ENST00000534829 IQGAP1P46940 1657 aa16.49■□□□□ 0.23
SSPN-203ENST00000534829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.48■□□□□ 0.23
SSPN-203ENST00000534829 ANKLE2Q86XL3 938 aa16.47■□□□□ 0.23
SSPN-203ENST00000534829 XIRP1Q702N8 1843 aaKnown RBP16.45■□□□□ 0.22
SSPN-203ENST00000534829 TNRQ92752 1358 aa16.44■□□□□ 0.22
SSPN-203ENST00000534829 GGT6Q6P531 493 aa16.43■□□□□ 0.22
SSPN-203ENST00000534829 CDK11AQ9UQ88 783 aaPredicted RBP16.43■□□□□ 0.22
SSPN-203ENST00000534829 CLIP1P30622 1438 aa16.43■□□□□ 0.22
SSPN-203ENST00000534829 FAM135BQ49AJ0 1406 aa16.43■□□□□ 0.22
SSPN-203ENST00000534829 A2MP01023 1474 aa16.42■□□□□ 0.22
SSPN-203ENST00000534829 ATP7AQ04656 1500 aa16.42■□□□□ 0.22
SSPN-203ENST00000534829 CHIC1Q5VXU3 224 aa16.41■□□□□ 0.22
SSPN-203ENST00000534829 INO80Q9ULG1 1556 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms