RNA–Protein interactions for RNA: ENST00000534435.1

SHARPIN-210, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-210ENST00000534435 LTBP4Q8N2S1 1624 aa14.33□□□□□ -0.11
SHARPIN-210ENST00000534435 DMRT2Q9Y5R5 561 aa14.33□□□□□ -0.12
SHARPIN-210ENST00000534435 PREX1Q8TCU6 1659 aa14.32□□□□□ -0.12
SHARPIN-210ENST00000534435 UHRF1BP1Q6BDS2 1440 aa14.32□□□□□ -0.12
SHARPIN-210ENST00000534435 SCAPERQ9BY12 1400 aa14.32□□□□□ -0.12
SHARPIN-210ENST00000534435 PLEKHD1A6NEE1 506 aa14.31□□□□□ -0.12
SHARPIN-210ENST00000534435 FAM9AQ8IZU1 332 aaPredicted RBP14.31□□□□□ -0.12
SHARPIN-210ENST00000534435 MAGI2Q86UL8 1455 aa14.3□□□□□ -0.12
SHARPIN-210ENST00000534435 SAMD9Q5K651 1589 aa14.3□□□□□ -0.12
SHARPIN-210ENST00000534435 PTPRTO14522 1441 aa14.29□□□□□ -0.12
SHARPIN-210ENST00000534435 ATP10AO60312 1499 aa14.29□□□□□ -0.12
SHARPIN-210ENST00000534435 C9orf84Q5VXU9 1444 aa14.28□□□□□ -0.12
SHARPIN-210ENST00000534435 ZNF335Q9H4Z2 1342 aaPredicted RBP14.25□□□□□ -0.13
SHARPIN-210ENST00000534435 UBAP1LF5GYI3 381 aa14.25□□□□□ -0.13
SHARPIN-210ENST00000534435 CFAP74Q9C0B2 1584 aa14.25□□□□□ -0.13
SHARPIN-210ENST00000534435 AFAP1Q8N556 730 aa14.24□□□□□ -0.13
SHARPIN-210ENST00000534435 CDK13Q14004 1512 aaKnown RBP14.24□□□□□ -0.13
SHARPIN-210ENST00000534435 PLCH2O75038 1416 aa14.23□□□□□ -0.13
SHARPIN-210ENST00000534435 NCOA1Q15788 1441 aa14.23□□□□□ -0.13
SHARPIN-210ENST00000534435 NCKAP5LQ9HCH0 1330 aa14.21□□□□□ -0.13
SHARPIN-210ENST00000534435 IQSEC2Q5JU85 1478 aa14.19□□□□□ -0.14
SHARPIN-210ENST00000534435 MYT1LQ9UL68 1186 aa14.19□□□□□ -0.14
SHARPIN-210ENST00000534435 HSPA1LP34931 641 aa14.18□□□□□ -0.14
SHARPIN-210ENST00000534435 EFCAB2Q5VUJ9 269 aa14.16□□□□□ -0.14
SHARPIN-210ENST00000534435 DIP2CQ9Y2E4 1556 aa14.16□□□□□ -0.14
SHARPIN-210ENST00000534435 C3P01024 1663 aa14.16□□□□□ -0.14
SHARPIN-210ENST00000534435 SCAF1Q9H7N4 1312 aaKnown RBP14.15□□□□□ -0.14
SHARPIN-210ENST00000534435 TRAPPC8Q9Y2L5 1435 aa14.15□□□□□ -0.14
SHARPIN-210ENST00000534435 MED1Q15648 1581 aaPredicted RBP14.15□□□□□ -0.14
SHARPIN-210ENST00000534435 PIP4K2BP78356 416 aa14.15□□□□□ -0.14
SHARPIN-210ENST00000534435 CAMSAP1Q5T5Y3 1602 aa14.15□□□□□ -0.14
SHARPIN-210ENST00000534435 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
SHARPIN-210ENST00000534435 ATP1B4Q9UN42 357 aaPredicted RBP14.13□□□□□ -0.15
SHARPIN-210ENST00000534435 ZNF518AQ6AHZ1 1483 aa14.12□□□□□ -0.15
SHARPIN-210ENST00000534435 ESF1Q9H501 851 aaKnown RBP14.12□□□□□ -0.15
SHARPIN-210ENST00000534435 ABCA6Q8N139 1617 aa14.12□□□□□ -0.15
SHARPIN-210ENST00000534435 KDM5CP41229 1560 aa14.11□□□□□ -0.15
SHARPIN-210ENST00000534435 SENP3Q9H4L4 574 aaPredicted RBP14.11□□□□□ -0.15
SHARPIN-210ENST00000534435 KIF14Q15058 1648 aa14.11□□□□□ -0.15
SHARPIN-210ENST00000534435 ARHGAP5Q13017 1502 aa14.09□□□□□ -0.15
SHARPIN-210ENST00000534435 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
SHARPIN-210ENST00000534435 REREQ9P2R6 1566 aa14.05□□□□□ -0.16
SHARPIN-210ENST00000534435 PHF23Q9BUL5 403 aaPredicted RBP14.05□□□□□ -0.16
SHARPIN-210ENST00000534435 ZMYM3Q14202 1370 aa14.05□□□□□ -0.16
SHARPIN-210ENST00000534435 MLH3Q9UHC1 1453 aa14.05□□□□□ -0.16
SHARPIN-210ENST00000534435 AGLP35573 1532 aa14.05□□□□□ -0.16
SHARPIN-210ENST00000534435 MYO5CQ9NQX4 1742 aa14.03□□□□□ -0.16
SHARPIN-210ENST00000534435 TCOF1Q13428 1488 aaKnown RBP14.02□□□□□ -0.16
SHARPIN-210ENST00000534435 NPATQ14207 1427 aa14.02□□□□□ -0.16
SHARPIN-210ENST00000534435 PPP6R1Q9UPN7 881 aa14.02□□□□□ -0.17
SHARPIN-210ENST00000534435 CNTLNQ9NXG0 1405 aa14.01□□□□□ -0.17
SHARPIN-210ENST00000534435 PKD2Q13563 968 aa14.01□□□□□ -0.17
SHARPIN-210ENST00000534435 TROQ12816 1431 aaPredicted RBP14□□□□□ -0.17
SHARPIN-210ENST00000534435 SETD1BQ9UPS6 1966 aaKnown RBP14□□□□□ -0.17
SHARPIN-210ENST00000534435 ABCC1P33527 1531 aa13.99□□□□□ -0.17
SHARPIN-210ENST00000534435 PLA2R1Q13018 1463 aa13.99□□□□□ -0.17
SHARPIN-210ENST00000534435 MYO3AQ8NEV4 1616 aa13.98□□□□□ -0.17
SHARPIN-210ENST00000534435 PTPRKQ15262 1439 aa13.98□□□□□ -0.17
SHARPIN-210ENST00000534435 CEP170BQ9Y4F5 1589 aaPredicted RBP13.97□□□□□ -0.17
SHARPIN-210ENST00000534435 RGS17Q9UGC6 210 aaPredicted RBP13.97□□□□□ -0.17
SHARPIN-210ENST00000534435 ALKQ9UM73 1620 aa13.97□□□□□ -0.17
SHARPIN-210ENST00000534435 TOM1O60784 492 aa13.96□□□□□ -0.17
SHARPIN-210ENST00000534435 KIDINS220Q9ULH0 1771 aa13.96□□□□□ -0.18
SHARPIN-210ENST00000534435 CDK11AQ9UQ88 783 aaPredicted RBP13.95□□□□□ -0.18
SHARPIN-210ENST00000534435 ZNF777Q9ULD5 760 aaPredicted RBP13.94□□□□□ -0.18
SHARPIN-210ENST00000534435 CLIP1P30622 1438 aa13.93□□□□□ -0.18
SHARPIN-210ENST00000534435 GGT6Q6P531 493 aa13.93□□□□□ -0.18
SHARPIN-210ENST00000534435 SHANK2Q9UPX8 1470 aa13.93□□□□□ -0.18
SHARPIN-210ENST00000534435 CDC42BPBQ9Y5S2 1711 aa13.93□□□□□ -0.18
SHARPIN-210ENST00000534435 ZNF142P52746 1687 aaPredicted RBP13.92□□□□□ -0.18
SHARPIN-210ENST00000534435 CLTCQ00610 1675 aaKnown RBP13.92□□□□□ -0.18
SHARPIN-210ENST00000534435 ITSN2Q9NZM3 1697 aa13.92□□□□□ -0.18
SHARPIN-210ENST00000534435 HNRNPMP52272 730 aaKnown RBP eCLIP13.92□□□□□ -0.18
SHARPIN-210ENST00000534435 ARHGAP35Q9NRY4 1499 aa13.92□□□□□ -0.18
SHARPIN-210ENST00000534435 SAMD9LQ8IVG5 1584 aa13.92□□□□□ -0.18
SHARPIN-210ENST00000534435 NEURL4Q96JN8 1562 aa13.91□□□□□ -0.18
SHARPIN-210ENST00000534435 MROH2AA6NES4 1674 aa13.91□□□□□ -0.18
SHARPIN-210ENST00000534435 FMN1Q68DA7 1419 aa13.9□□□□□ -0.18
SHARPIN-210ENST00000534435 FBXO31Q5XUX0 539 aaPredicted RBP13.9□□□□□ -0.18
SHARPIN-210ENST00000534435 PREX2Q70Z35 1606 aa13.9□□□□□ -0.19
SHARPIN-210ENST00000534435 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.19
SHARPIN-210ENST00000534435 SUPT6HQ7KZ85 1726 aaKnown RBP13.89□□□□□ -0.19
SHARPIN-210ENST00000534435 CPS1P31327 1500 aa13.89□□□□□ -0.19
SHARPIN-210ENST00000534435 A2ML1A8K2U0 1454 aa13.88□□□□□ -0.19
SHARPIN-210ENST00000534435 SYCP2Q9BX26 1530 aa13.88□□□□□ -0.19
SHARPIN-210ENST00000534435 VWDEQ8N2E2 1590 aa13.88□□□□□ -0.19
SHARPIN-210ENST00000534435 LRRIQ1Q96JM4 1722 aa13.87□□□□□ -0.19
SHARPIN-210ENST00000534435 DNMT1P26358 1616 aaKnown RBP13.87□□□□□ -0.19
SHARPIN-210ENST00000534435 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.86□□□□□ -0.19
SHARPIN-210ENST00000534435 UBTFP17480 764 aaKnown RBP13.86□□□□□ -0.19
SHARPIN-210ENST00000534435 POTEAQ6S8J7 498 aa13.86□□□□□ -0.19
SHARPIN-210ENST00000534435 A2MP01023 1474 aa13.86□□□□□ -0.19
SHARPIN-210ENST00000534435 PLXNC1O60486 1568 aa13.85□□□□□ -0.19
SHARPIN-210ENST00000534435 EEA1Q15075 1411 aa13.84□□□□□ -0.19
SHARPIN-210ENST00000534435 ATP7AQ04656 1500 aa13.84□□□□□ -0.19
SHARPIN-210ENST00000534435 TNRQ92752 1358 aa13.82□□□□□ -0.2
SHARPIN-210ENST00000534435 NPHP4O75161 1426 aaPredicted RBP13.81□□□□□ -0.2
SHARPIN-210ENST00000534435 LRRC7Q96NW7 1537 aa13.8□□□□□ -0.2
SHARPIN-210ENST00000534435 GPATCH8Q9UKJ3 1502 aaKnown RBP13.8□□□□□ -0.2
SHARPIN-210ENST00000534435 INO80Q9ULG1 1556 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms