RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 KIAA0586Q9BVV6 1533 aa6.34□□□□□ -1.39
CTSC-208ENST00000533897 DNAJC5BQ9UF47 199 aa6.34□□□□□ -1.39
CTSC-208ENST00000533897 ZNF608Q9ULD9 1512 aaPredicted RBP6.34□□□□□ -1.4
CTSC-208ENST00000533897 MTUS2Q5JR59 1369 aa6.33□□□□□ -1.4
CTSC-208ENST00000533897 IFT140Q96RY7 1462 aa6.33□□□□□ -1.4
CTSC-208ENST00000533897 WASHC2AQ641Q2 1341 aa6.33□□□□□ -1.4
CTSC-208ENST00000533897 CNTLNQ9NXG0 1405 aa6.33□□□□□ -1.4
CTSC-208ENST00000533897 P3H3Q8IVL6 736 aa6.33□□□□□ -1.4
CTSC-208ENST00000533897 GRIN2AQ12879 1464 aa6.32□□□□□ -1.4
CTSC-208ENST00000533897 ABCC10Q5T3U5 1492 aa6.32□□□□□ -1.4
CTSC-208ENST00000533897 ITGAEP38570 1179 aa6.32□□□□□ -1.4
CTSC-208ENST00000533897 LAMC1P11047 1609 aa6.31□□□□□ -1.4
CTSC-208ENST00000533897 DDX10Q13206 875 aaKnown RBP6.31□□□□□ -1.4
CTSC-208ENST00000533897 FAM50AQ14320 339 aaKnown RBP6.31□□□□□ -1.4
CTSC-208ENST00000533897 CDC42BPBQ9Y5S2 1711 aa6.31□□□□□ -1.4
CTSC-208ENST00000533897 SHANK2Q9UPX8 1470 aa6.31□□□□□ -1.4
CTSC-208ENST00000533897 CAMSAP2Q08AD1 1489 aa6.31□□□□□ -1.4
CTSC-208ENST00000533897 UHRF1BP1Q6BDS2 1440 aa6.31□□□□□ -1.4
CTSC-208ENST00000533897 ARHGEF5Q12774 1597 aa6.31□□□□□ -1.4
CTSC-208ENST00000533897 PTPRGP23470 1445 aa6.3□□□□□ -1.4
CTSC-208ENST00000533897 GPATCH8Q9UKJ3 1502 aaKnown RBP6.3□□□□□ -1.4
CTSC-208ENST00000533897 NUP160Q12769 1436 aa6.3□□□□□ -1.4
CTSC-208ENST00000533897 TRPM1Q7Z4N2 1603 aa6.3□□□□□ -1.4
CTSC-208ENST00000533897 DHX29Q7Z478 1369 aaKnown RBP6.3□□□□□ -1.4
CTSC-208ENST00000533897 MYO5CQ9NQX4 1742 aa6.29□□□□□ -1.4
CTSC-208ENST00000533897 ARHGEF12Q9NZN5 1544 aa6.29□□□□□ -1.4
CTSC-208ENST00000533897 MAGI1Q96QZ7 1491 aaPredicted RBP6.29□□□□□ -1.4
CTSC-208ENST00000533897 C11orf95C9JLR9 678 aaPredicted RBP6.29□□□□□ -1.4
CTSC-208ENST00000533897 UNC13BO14795 1591 aa6.29□□□□□ -1.4
CTSC-208ENST00000533897 SHROOM2Q13796 1616 aa6.29□□□□□ -1.4
CTSC-208ENST00000533897 PREX2Q70Z35 1606 aa6.29□□□□□ -1.4
CTSC-208ENST00000533897 MAST1Q9Y2H9 1570 aa6.29□□□□□ -1.4
CTSC-208ENST00000533897 TONSLQ96HA7 1378 aa6.29□□□□□ -1.4
CTSC-208ENST00000533897 CCDC7Q96M83 1385 aa6.28□□□□□ -1.4
CTSC-208ENST00000533897 RNF17Q9BXT8 1623 aaKnown RBP6.27□□□□□ -1.41
CTSC-208ENST00000533897 TROQ12816 1431 aaPredicted RBP6.27□□□□□ -1.41
CTSC-208ENST00000533897 RALGAPBQ86X10 1494 aa6.27□□□□□ -1.41
CTSC-208ENST00000533897 SAMD9LQ8IVG5 1584 aa6.26□□□□□ -1.41
CTSC-208ENST00000533897 NBPF8Q3BBV2 869 aa6.26□□□□□ -1.41
CTSC-208ENST00000533897 HIRIP3Q9BW71 556 aaPredicted RBP6.26□□□□□ -1.41
CTSC-208ENST00000533897 SYNJ2O15056 1496 aa6.26□□□□□ -1.41
CTSC-208ENST00000533897 MPHOSPH9Q99550 1183 aa6.26□□□□□ -1.41
CTSC-208ENST00000533897 RNF123Q5XPI4 1314 aa6.25□□□□□ -1.41
CTSC-208ENST00000533897 MAGI2Q86UL8 1455 aa6.25□□□□□ -1.41
CTSC-208ENST00000533897 HSPA5P11021 654 aaKnown RBP6.25□□□□□ -1.41
CTSC-208ENST00000533897 CCDC184Q52MB2 194 aa6.25□□□□□ -1.41
CTSC-208ENST00000533897 PLXNC1O60486 1568 aa6.25□□□□□ -1.41
CTSC-208ENST00000533897 PLB1Q6P1J6 1458 aa6.25□□□□□ -1.41
CTSC-208ENST00000533897 IQGAP3Q86VI3 1631 aa6.25□□□□□ -1.41
CTSC-208ENST00000533897 KIAA1107Q9UPP5 1409 aa6.24□□□□□ -1.41
CTSC-208ENST00000533897 PRG4Q92954 1404 aaPredicted RBP6.24□□□□□ -1.41
CTSC-208ENST00000533897 ANP32EQ9BTT0 268 aa6.24□□□□□ -1.41
CTSC-208ENST00000533897 L3MBTL2Q969R5 705 aa6.23□□□□□ -1.41
CTSC-208ENST00000533897 MSH5O43196 834 aa6.23□□□□□ -1.41
CTSC-208ENST00000533897 FKBP8Q14318 412 aa6.23□□□□□ -1.41
CTSC-208ENST00000533897 PRDM15P57071 1507 aaPredicted RBP6.22□□□□□ -1.41
CTSC-208ENST00000533897 ANP32CO43423 234 aa6.22□□□□□ -1.41
CTSC-208ENST00000533897 ZMYM4Q5VZL5 1548 aa6.22□□□□□ -1.41
CTSC-208ENST00000533897 PRKRIP1Q9H875 184 aaPredicted RBP6.22□□□□□ -1.41
CTSC-208ENST00000533897 KIF7Q2M1P5 1343 aa6.22□□□□□ -1.41
CTSC-208ENST00000533897 IQGAP1P46940 1657 aa6.22□□□□□ -1.41
CTSC-208ENST00000533897 RBM19Q9Y4C8 960 aaKnown RBP6.22□□□□□ -1.41
CTSC-208ENST00000533897 ZNF644Q9H582 1327 aaPredicted RBP6.22□□□□□ -1.41
CTSC-208ENST00000533897 ATP10BO94823 1461 aa6.22□□□□□ -1.41
CTSC-208ENST00000533897 ERICH6BQ5W0A0 696 aa6.21□□□□□ -1.41
CTSC-208ENST00000533897 LRPPRCP42704 1394 aaKnown RBP6.21□□□□□ -1.41
CTSC-208ENST00000533897 SMG6Q86US8 1419 aaKnown RBP6.21□□□□□ -1.42
CTSC-208ENST00000533897 DEPDC5O75140 1603 aa6.21□□□□□ -1.42
CTSC-208ENST00000533897 TTC37Q6PGP7 1564 aa6.21□□□□□ -1.42
CTSC-208ENST00000533897 RRP7BPQ9NSQ0 103 aa6.21□□□□□ -1.42
CTSC-208ENST00000533897 CHD1O14646 1710 aa6.21□□□□□ -1.42
CTSC-208ENST00000533897 MYOM1P52179 1685 aa6.21□□□□□ -1.42
CTSC-208ENST00000533897 ZBED9Q6R2W3 1325 aa6.21□□□□□ -1.42
CTSC-208ENST00000533897 ATP10AO60312 1499 aa6.2□□□□□ -1.42
CTSC-208ENST00000533897 FANCIQ9NVI1 1328 aa6.2□□□□□ -1.42
CTSC-208ENST00000533897 TRIM52Q96A61 297 aa6.2□□□□□ -1.42
CTSC-208ENST00000533897 PLA2R1Q13018 1463 aa6.2□□□□□ -1.42
CTSC-208ENST00000533897 CEP152O94986 1710 aa6.19□□□□□ -1.42
CTSC-208ENST00000533897 FAM135AQ9P2D6 1515 aa6.19□□□□□ -1.42
CTSC-208ENST00000533897 ARID4BQ4LE39 1312 aaPredicted RBP6.19□□□□□ -1.42
CTSC-208ENST00000533897 IFT172Q9UG01 1749 aa6.19□□□□□ -1.42
CTSC-208ENST00000533897 SPHKAPQ2M3C7 1700 aa6.19□□□□□ -1.42
CTSC-208ENST00000533897 NEURL4Q96JN8 1562 aa6.19□□□□□ -1.42
CTSC-208ENST00000533897 EIF4G2P78344 907 aaKnown RBP eCLIP6.18□□□□□ -1.42
CTSC-208ENST00000533897 GPRASP1Q5JY77 1395 aa6.18□□□□□ -1.42
CTSC-208ENST00000533897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.18□□□□□ -1.42
CTSC-208ENST00000533897 FOXD1Q16676 465 aa6.18□□□□□ -1.42
CTSC-208ENST00000533897 MADDQ8WXG6 1647 aa6.18□□□□□ -1.42
CTSC-208ENST00000533897 C9orf84Q5VXU9 1444 aa6.17□□□□□ -1.42
CTSC-208ENST00000533897 ANKRD50Q9ULJ7 1429 aa6.17□□□□□ -1.42
CTSC-208ENST00000533897 KIAA1210Q9ULL0 1709 aa6.17□□□□□ -1.42
CTSC-208ENST00000533897 INSRP06213 1382 aa6.17□□□□□ -1.42
CTSC-208ENST00000533897 VWDEQ8N2E2 1590 aa6.16□□□□□ -1.42
CTSC-208ENST00000533897 EIF2AK4Q9P2K8 1649 aaKnown RBP6.16□□□□□ -1.42
CTSC-208ENST00000533897 CHIC2Q9UKJ5 165 aa6.16□□□□□ -1.42
CTSC-208ENST00000533897 ATP1B4Q9UN42 357 aaPredicted RBP6.16□□□□□ -1.42
CTSC-208ENST00000533897 PRAG1Q86YV5 1406 aa6.16□□□□□ -1.42
CTSC-208ENST00000533897 USP47Q96K76 1375 aa6.16□□□□□ -1.42
CTSC-208ENST00000533897 COL17A1Q9UMD9 1497 aaPredicted RBP6.15□□□□□ -1.42
CTSC-208ENST00000533897 A2MP01023 1474 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms