RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 KIF14Q15058 1648 aa16.98■□□□□ 0.31
ATM-222ENST00000533733 ADGRL2O95490 1459 aa16.98■□□□□ 0.31
ATM-222ENST00000533733 RRP7BPQ9NSQ0 103 aa16.97■□□□□ 0.31
ATM-222ENST00000533733 CAMSAP2Q08AD1 1489 aa16.97■□□□□ 0.31
ATM-222ENST00000533733 JPH4Q96JJ6 628 aa16.96■□□□□ 0.31
ATM-222ENST00000533733 DENND4BO75064 1496 aaPredicted RBP16.96■□□□□ 0.31
ATM-222ENST00000533733 PLB1Q6P1J6 1458 aa16.96■□□□□ 0.31
ATM-222ENST00000533733 GPATCH8Q9UKJ3 1502 aaKnown RBP16.95■□□□□ 0.3
ATM-222ENST00000533733 CDC42BPAQ5VT25 1732 aa16.95■□□□□ 0.3
ATM-222ENST00000533733 CHIC2Q9UKJ5 165 aa16.93■□□□□ 0.3
ATM-222ENST00000533733 SHANK2Q9UPX8 1470 aa16.93■□□□□ 0.3
ATM-222ENST00000533733 CCER2I3L3R5 266 aa16.93■□□□□ 0.3
ATM-222ENST00000533733 TRIM52Q96A61 297 aa16.93■□□□□ 0.3
ATM-222ENST00000533733 MPHOSPH9Q99550 1183 aa16.93■□□□□ 0.3
ATM-222ENST00000533733 PRG4Q92954 1404 aaPredicted RBP16.92■□□□□ 0.3
ATM-222ENST00000533733 RPRD2Q5VT52 1461 aaKnown RBP16.91■□□□□ 0.3
ATM-222ENST00000533733 CFDP1Q9UEE9 299 aaPredicted RBP16.9■□□□□ 0.3
ATM-222ENST00000533733 DDX10Q13206 875 aaKnown RBP16.88■□□□□ 0.29
ATM-222ENST00000533733 POLR1AO95602 1720 aaPredicted RBP16.88■□□□□ 0.29
ATM-222ENST00000533733 ABCC10Q5T3U5 1492 aa16.88■□□□□ 0.29
ATM-222ENST00000533733 NCOA1Q15788 1441 aa16.88■□□□□ 0.29
ATM-222ENST00000533733 ANKRD30BQ9BXX2 1392 aa16.87■□□□□ 0.29
ATM-222ENST00000533733 ARHGEF5Q12774 1597 aa16.87■□□□□ 0.29
ATM-222ENST00000533733 SHROOM2Q13796 1616 aa16.87■□□□□ 0.29
ATM-222ENST00000533733 ANKRD30AQ9BXX3 1397 aa16.87■□□□□ 0.29
ATM-222ENST00000533733 PLEKHD1A6NEE1 506 aa16.87■□□□□ 0.29
ATM-222ENST00000533733 ANP32CO43423 234 aa16.87■□□□□ 0.29
ATM-222ENST00000533733 FBLN2P98095 1184 aa16.87■□□□□ 0.29
ATM-222ENST00000533733 CHD1O14646 1710 aa16.86■□□□□ 0.29
ATM-222ENST00000533733 ATP10BO94823 1461 aa16.86■□□□□ 0.29
ATM-222ENST00000533733 ARID3CA6NKF2 412 aa16.84■□□□□ 0.29
ATM-222ENST00000533733 TEX14Q8IWB6 1497 aa16.82■□□□□ 0.28
ATM-222ENST00000533733 KDM5DQ9BY66 1539 aa16.82■□□□□ 0.28
ATM-222ENST00000533733 PREX2Q70Z35 1606 aa16.82■□□□□ 0.28
ATM-222ENST00000533733 PZPP20742 1482 aa16.82■□□□□ 0.28
ATM-222ENST00000533733 ZNF644Q9H582 1327 aaPredicted RBP16.81■□□□□ 0.28
ATM-222ENST00000533733 PTPRGP23470 1445 aa16.8■□□□□ 0.28
ATM-222ENST00000533733 EIF4G2P78344 907 aaKnown RBP eCLIP16.8■□□□□ 0.28
ATM-222ENST00000533733 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
ATM-222ENST00000533733 KIAA1107Q9UPP5 1409 aa16.78■□□□□ 0.28
ATM-222ENST00000533733 RSPH4AQ5TD94 716 aa16.78■□□□□ 0.28
ATM-222ENST00000533733 ANKRD50Q9ULJ7 1429 aa16.77■□□□□ 0.28
ATM-222ENST00000533733 CDC42BPBQ9Y5S2 1711 aa16.77■□□□□ 0.27
ATM-222ENST00000533733 C9orf84Q5VXU9 1444 aa16.76■□□□□ 0.27
ATM-222ENST00000533733 L3MBTL2Q969R5 705 aa16.76■□□□□ 0.27
ATM-222ENST00000533733 MAST1Q9Y2H9 1570 aa16.75■□□□□ 0.27
ATM-222ENST00000533733 MBD5Q9P267 1494 aa16.73■□□□□ 0.27
ATM-222ENST00000533733 CCDC141Q6ZP82 1450 aa16.73■□□□□ 0.27
ATM-222ENST00000533733 HSPA5P11021 654 aaKnown RBP16.73■□□□□ 0.27
ATM-222ENST00000533733 ABCC2Q92887 1545 aa16.72■□□□□ 0.27
ATM-222ENST00000533733 TSPY4P0CV99 314 aa16.72■□□□□ 0.27
ATM-222ENST00000533733 TSPY10P0CW01 314 aa16.72■□□□□ 0.27
ATM-222ENST00000533733 MYO5CQ9NQX4 1742 aa16.72■□□□□ 0.27
ATM-222ENST00000533733 ARHGEF12Q9NZN5 1544 aa16.72■□□□□ 0.27
ATM-222ENST00000533733 PLEKHH2Q8IVE3 1493 aa16.71■□□□□ 0.27
ATM-222ENST00000533733 SAMD9LQ8IVG5 1584 aa16.71■□□□□ 0.27
ATM-222ENST00000533733 CNTLNQ9NXG0 1405 aa16.71■□□□□ 0.27
ATM-222ENST00000533733 HIRIP3Q9BW71 556 aaPredicted RBP16.7■□□□□ 0.26
ATM-222ENST00000533733 ZNF777Q9ULD5 760 aaPredicted RBP16.7■□□□□ 0.26
ATM-222ENST00000533733 SPATA31E1Q6ZUB1 1445 aa16.68■□□□□ 0.26
ATM-222ENST00000533733 WASHC2AQ641Q2 1341 aa16.68■□□□□ 0.26
ATM-222ENST00000533733 PLXNC1O60486 1568 aa16.67■□□□□ 0.26
ATM-222ENST00000533733 UHRF1BP1Q6BDS2 1440 aa16.67■□□□□ 0.26
ATM-222ENST00000533733 CCDC7Q96M83 1385 aa16.66■□□□□ 0.26
ATM-222ENST00000533733 SUPT16HQ9Y5B9 1047 aaKnown RBP16.66■□□□□ 0.26
ATM-222ENST00000533733 UHRF1BP1LA0JNW5 1464 aa16.66■□□□□ 0.26
ATM-222ENST00000533733 KCNH8Q96L42 1107 aa16.65■□□□□ 0.26
ATM-222ENST00000533733 UNC13BO14795 1591 aa16.65■□□□□ 0.26
ATM-222ENST00000533733 ARID4BQ4LE39 1312 aaPredicted RBP16.65■□□□□ 0.26
ATM-222ENST00000533733 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
ATM-222ENST00000533733 KIF15Q9NS87 1388 aa16.65■□□□□ 0.26
ATM-222ENST00000533733 FOXD1Q16676 465 aa16.65■□□□□ 0.26
ATM-222ENST00000533733 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.64■□□□□ 0.25
ATM-222ENST00000533733 DNAJC5Q9H3Z4 198 aa16.63■□□□□ 0.25
ATM-222ENST00000533733 TTC37Q6PGP7 1564 aa16.63■□□□□ 0.25
ATM-222ENST00000533733 NUP155O75694 1391 aa16.63■□□□□ 0.25
ATM-222ENST00000533733 PKD2Q13563 968 aa16.62■□□□□ 0.25
ATM-222ENST00000533733 RALGAPBQ86X10 1494 aa16.62■□□□□ 0.25
ATM-222ENST00000533733 ARHGAP5Q13017 1502 aa16.62■□□□□ 0.25
ATM-222ENST00000533733 KDM5CP41229 1560 aa16.61■□□□□ 0.25
ATM-222ENST00000533733 NBPF8Q3BBV2 869 aa16.61■□□□□ 0.25
ATM-222ENST00000533733 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
ATM-222ENST00000533733 ARAP3Q8WWN8 1544 aa16.59■□□□□ 0.25
ATM-222ENST00000533733 SYCP2Q9BX26 1530 aa16.59■□□□□ 0.25
ATM-222ENST00000533733 ZCCHC11Q5TAX3 1644 aaKnown RBP16.59■□□□□ 0.25
ATM-222ENST00000533733 IQGAP3Q86VI3 1631 aa16.59■□□□□ 0.25
ATM-222ENST00000533733 FAM135AQ9P2D6 1515 aa16.59■□□□□ 0.25
ATM-222ENST00000533733 DUOX2Q9NRD8 1548 aa16.57■□□□□ 0.24
ATM-222ENST00000533733 ROCK2O75116 1388 aaKnown RBP16.57■□□□□ 0.24
ATM-222ENST00000533733 NEFLP07196 543 aa16.55■□□□□ 0.24
ATM-222ENST00000533733 HNRNPMP52272 730 aaKnown RBP eCLIP16.54■□□□□ 0.24
ATM-222ENST00000533733 ERBINQ96RT1 1412 aa16.54■□□□□ 0.24
ATM-222ENST00000533733 USP47Q96K76 1375 aa16.54■□□□□ 0.24
ATM-222ENST00000533733 MAGI2Q86UL8 1455 aa16.54■□□□□ 0.24
ATM-222ENST00000533733 PLCH2O75038 1416 aa16.53■□□□□ 0.24
ATM-222ENST00000533733 LAMC1P11047 1609 aa16.53■□□□□ 0.24
ATM-222ENST00000533733 ERCC6L2Q5T890 1561 aa16.53■□□□□ 0.24
ATM-222ENST00000533733 KIF7Q2M1P5 1343 aa16.52■□□□□ 0.24
ATM-222ENST00000533733 PRKRIP1Q9H875 184 aaPredicted RBP16.51■□□□□ 0.23
ATM-222ENST00000533733 ABCC1P33527 1531 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms