RNA–Protein interactions for RNA: ENST00000533568.5

PAK1-220, Transcript of p21 (RAC1) activated kinase 1, humanhuman

TSL 3

Gene PAK1, Length 762 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK1-220ENST00000533568 UBAP1LF5GYI3 381 aa28.81■■■□□ 2.2
PAK1-220ENST00000533568 P3H3Q8IVL6 736 aa28.81■■■□□ 2.2
PAK1-220ENST00000533568 FAM9AQ8IZU1 332 aaPredicted RBP28.81■■■□□ 2.2
PAK1-220ENST00000533568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.8■■■□□ 2.2
PAK1-220ENST00000533568 HNRNPUL2Q1KMD3 747 aaKnown RBP28.8■■■□□ 2.2
PAK1-220ENST00000533568 CFAP74Q9C0B2 1584 aa28.79■■■□□ 2.2
PAK1-220ENST00000533568 MED1Q15648 1581 aaPredicted RBP28.79■■■□□ 2.2
PAK1-220ENST00000533568 ATP10AO60312 1499 aa28.77■■■□□ 2.2
PAK1-220ENST00000533568 C9orf84Q5VXU9 1444 aa28.75■■■□□ 2.19
PAK1-220ENST00000533568 NCOA1Q15788 1441 aa28.74■■■□□ 2.19
PAK1-220ENST00000533568 RAPGEF6Q8TEU7 1601 aa28.73■■■□□ 2.19
PAK1-220ENST00000533568 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.7■■■□□ 2.19
PAK1-220ENST00000533568 NUP153P49790 1475 aaKnown RBP28.7■■■□□ 2.18
PAK1-220ENST00000533568 SCAPERQ9BY12 1400 aa28.67■■■□□ 2.18
PAK1-220ENST00000533568 ZNF335Q9H4Z2 1342 aaPredicted RBP28.67■■■□□ 2.18
PAK1-220ENST00000533568 PLEKHD1A6NEE1 506 aa28.64■■■□□ 2.18
PAK1-220ENST00000533568 HSPA1LP34931 641 aa28.64■■■□□ 2.18
PAK1-220ENST00000533568 C3P01024 1663 aa28.61■■■□□ 2.17
PAK1-220ENST00000533568 TRAPPC8Q9Y2L5 1435 aa28.6■■■□□ 2.17
PAK1-220ENST00000533568 PRXQ9BXM0 1461 aa28.59■■■□□ 2.17
PAK1-220ENST00000533568 SAMD9Q5K651 1589 aa28.56■■■□□ 2.16
PAK1-220ENST00000533568 CAMSAP1Q5T5Y3 1602 aa28.54■■■□□ 2.16
PAK1-220ENST00000533568 PHF23Q9BUL5 403 aaPredicted RBP28.52■■■□□ 2.16
PAK1-220ENST00000533568 NCKAP5LQ9HCH0 1330 aa28.51■■■□□ 2.15
PAK1-220ENST00000533568 PLCH2O75038 1416 aa28.51■■■□□ 2.15
PAK1-220ENST00000533568 SCAF1Q9H7N4 1312 aaKnown RBP28.45■■■□□ 2.15
PAK1-220ENST00000533568 PIP4K2BP78356 416 aa28.45■■■□□ 2.14
PAK1-220ENST00000533568 REREQ9P2R6 1566 aa28.41■■■□□ 2.14
PAK1-220ENST00000533568 DIP2CQ9Y2E4 1556 aa28.41■■■□□ 2.14
PAK1-220ENST00000533568 ZNF518AQ6AHZ1 1483 aa28.4■■■□□ 2.14
PAK1-220ENST00000533568 KDM5CP41229 1560 aa28.39■■■□□ 2.14
PAK1-220ENST00000533568 AFAP1Q8N556 730 aa28.39■■■□□ 2.14
PAK1-220ENST00000533568 ESF1Q9H501 851 aaKnown RBP28.39■■■□□ 2.14
PAK1-220ENST00000533568 AGLP35573 1532 aa28.38■■■□□ 2.13
PAK1-220ENST00000533568 EFCAB2Q5VUJ9 269 aa28.37■■■□□ 2.13
PAK1-220ENST00000533568 PKD2Q13563 968 aa28.36■■■□□ 2.13
PAK1-220ENST00000533568 NPATQ14207 1427 aa28.35■■■□□ 2.13
PAK1-220ENST00000533568 TOM1O60784 492 aa28.35■■■□□ 2.13
PAK1-220ENST00000533568 PLA2R1Q13018 1463 aa28.34■■■□□ 2.13
PAK1-220ENST00000533568 TCOF1Q13428 1488 aaKnown RBP28.34■■■□□ 2.13
PAK1-220ENST00000533568 CNTLNQ9NXG0 1405 aa28.33■■■□□ 2.13
PAK1-220ENST00000533568 ABCA6Q8N139 1617 aa28.3■■■□□ 2.12
PAK1-220ENST00000533568 RGS17Q9UGC6 210 aaPredicted RBP28.28■■■□□ 2.12
PAK1-220ENST00000533568 MYT1LQ9UL68 1186 aa28.28■■■□□ 2.12
PAK1-220ENST00000533568 PPP6R1Q9UPN7 881 aa28.28■■■□□ 2.12
PAK1-220ENST00000533568 CDK13Q14004 1512 aaKnown RBP28.25■■■□□ 2.11
PAK1-220ENST00000533568 MLH3Q9UHC1 1453 aa28.25■■■□□ 2.11
PAK1-220ENST00000533568 MYO5CQ9NQX4 1742 aa28.23■■■□□ 2.11
PAK1-220ENST00000533568 ZMYM3Q14202 1370 aa28.22■■■□□ 2.11
PAK1-220ENST00000533568 ZNF142P52746 1687 aaPredicted RBP28.21■■■□□ 2.11
PAK1-220ENST00000533568 ALKQ9UM73 1620 aa28.21■■■□□ 2.11
PAK1-220ENST00000533568 CPS1P31327 1500 aa28.19■■■□□ 2.1
PAK1-220ENST00000533568 MROH2AA6NES4 1674 aa28.19■■■□□ 2.1
PAK1-220ENST00000533568 RANGAP1P46060 587 aaPredicted RBP28.18■■■□□ 2.1
PAK1-220ENST00000533568 MYO3AQ8NEV4 1616 aa28.17■■■□□ 2.1
PAK1-220ENST00000533568 CEP170BQ9Y4F5 1589 aaPredicted RBP28.16■■■□□ 2.1
PAK1-220ENST00000533568 PTPRKQ15262 1439 aa28.13■■■□□ 2.09
PAK1-220ENST00000533568 SHANK2Q9UPX8 1470 aa28.13■■■□□ 2.09
PAK1-220ENST00000533568 ARHGAP5Q13017 1502 aa28.13■■■□□ 2.09
PAK1-220ENST00000533568 SUPT6HQ7KZ85 1726 aaKnown RBP28.12■■■□□ 2.09
PAK1-220ENST00000533568 KIF14Q15058 1648 aa28.08■■■□□ 2.09
PAK1-220ENST00000533568 SENP3Q9H4L4 574 aaPredicted RBP28.07■■■□□ 2.08
PAK1-220ENST00000533568 KIDINS220Q9ULH0 1771 aa28.05■■■□□ 2.08
PAK1-220ENST00000533568 POTEAQ6S8J7 498 aa28.02■■■□□ 2.08
PAK1-220ENST00000533568 NEURL4Q96JN8 1562 aa28.02■■■□□ 2.08
PAK1-220ENST00000533568 VWDEQ8N2E2 1590 aa27.99■■■□□ 2.07
PAK1-220ENST00000533568 ABCC1P33527 1531 aa27.98■■■□□ 2.07
PAK1-220ENST00000533568 CLTCQ00610 1675 aaKnown RBP27.98■■■□□ 2.07
PAK1-220ENST00000533568 DNMT1P26358 1616 aaKnown RBP27.98■■■□□ 2.07
PAK1-220ENST00000533568 A2ML1A8K2U0 1454 aa27.97■■■□□ 2.07
PAK1-220ENST00000533568 CDC42BPBQ9Y5S2 1711 aa27.95■■■□□ 2.07
PAK1-220ENST00000533568 CSRNP3Q8WYN3 585 aa27.95■■■□□ 2.06
PAK1-220ENST00000533568 TROQ12816 1431 aaPredicted RBP27.93■■■□□ 2.06
PAK1-220ENST00000533568 CDK11AQ9UQ88 783 aaPredicted RBP27.93■■■□□ 2.06
PAK1-220ENST00000533568 ITSN2Q9NZM3 1697 aa27.93■■■□□ 2.06
PAK1-220ENST00000533568 POLR1AO95602 1720 aaPredicted RBP27.92■■■□□ 2.06
PAK1-220ENST00000533568 ATP1B4Q9UN42 357 aaPredicted RBP27.86■■■□□ 2.05
PAK1-220ENST00000533568 SAMD9LQ8IVG5 1584 aa27.84■■■□□ 2.05
PAK1-220ENST00000533568 SETD1AO15047 1707 aaKnown RBP27.84■■■□□ 2.05
PAK1-220ENST00000533568 LRRC7Q96NW7 1537 aa27.83■■■□□ 2.05
PAK1-220ENST00000533568 CLIP1P30622 1438 aa27.83■■■□□ 2.05
PAK1-220ENST00000533568 SRCAPQ6ZRS2 3230 aa27.82■■■□□ 2.04
PAK1-220ENST00000533568 PREX2Q70Z35 1606 aa27.82■■■□□ 2.04
PAK1-220ENST00000533568 PLXNC1O60486 1568 aa27.81■■■□□ 2.04
PAK1-220ENST00000533568 RNF17Q9BXT8 1623 aaKnown RBP27.81■■■□□ 2.04
PAK1-220ENST00000533568 GGT6Q6P531 493 aa27.8■■■□□ 2.04
PAK1-220ENST00000533568 ANKLE2Q86XL3 938 aa27.79■■■□□ 2.04
PAK1-220ENST00000533568 STRCP1A6NGW2 1772 aa27.78■■■□□ 2.04
PAK1-220ENST00000533568 MED14O60244 1454 aa27.77■■■□□ 2.04
PAK1-220ENST00000533568 NPHP4O75161 1426 aaPredicted RBP27.77■■■□□ 2.04
PAK1-220ENST00000533568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.76■■■□□ 2.03
PAK1-220ENST00000533568 SPAG9O60271 1321 aaKnown RBP27.75■■■□□ 2.03
PAK1-220ENST00000533568 A2MP01023 1474 aa27.74■■■□□ 2.03
PAK1-220ENST00000533568 FMN1Q68DA7 1419 aa27.73■■■□□ 2.03
PAK1-220ENST00000533568 TNRQ92752 1358 aa27.72■■■□□ 2.03
PAK1-220ENST00000533568 UPF1Q92900 1129 aaKnown RBP eCLIP27.71■■■□□ 2.03
PAK1-220ENST00000533568 SYNMO15061 1565 aa27.7■■■□□ 2.03
PAK1-220ENST00000533568 FBXO31Q5XUX0 539 aaPredicted RBP27.7■■■□□ 2.02
PAK1-220ENST00000533568 DEPDC5O75140 1603 aa27.7■■■□□ 2.02
PAK1-220ENST00000533568 ATP7AQ04656 1500 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms