RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 ABCA8O94911 1581 aa27.65■■■□□ 2.02
UBXN1-215ENST00000533476 ABCC5O15440 1437 aa27.63■■■□□ 2.01
UBXN1-215ENST00000533476 DENND4BO75064 1496 aaPredicted RBP27.62■■■□□ 2.01
UBXN1-215ENST00000533476 KIF14Q15058 1648 aa27.61■■■□□ 2.01
UBXN1-215ENST00000533476 CHD1O14646 1710 aa27.58■■■□□ 2.01
UBXN1-215ENST00000533476 CAMSAP2Q08AD1 1489 aa27.58■■■□□ 2.01
UBXN1-215ENST00000533476 KDM5BQ9UGL1 1544 aa27.58■■■□□ 2.01
UBXN1-215ENST00000533476 GPATCH8Q9UKJ3 1502 aaKnown RBP27.57■■■□□ 2
UBXN1-215ENST00000533476 ZNF644Q9H582 1327 aaPredicted RBP27.55■■■□□ 2
UBXN1-215ENST00000533476 ADGBQ8N7X0 1667 aa27.53■■■□□ 2
UBXN1-215ENST00000533476 TRIM52Q96A61 297 aa27.52■■■□□ 2
UBXN1-215ENST00000533476 CROCC2H7BZ55 1655 aa27.51■■□□□ 1.99
UBXN1-215ENST00000533476 CFDP1Q9UEE9 299 aaPredicted RBP27.49■■□□□ 1.99
UBXN1-215ENST00000533476 ATP10BO94823 1461 aa27.49■■□□□ 1.99
UBXN1-215ENST00000533476 MPHOSPH9Q99550 1183 aa27.49■■□□□ 1.99
UBXN1-215ENST00000533476 ADGRL2O95490 1459 aa27.46■■□□□ 1.99
UBXN1-215ENST00000533476 ABCC10Q5T3U5 1492 aa27.46■■□□□ 1.99
UBXN1-215ENST00000533476 CDC42BPAQ5VT25 1732 aa27.45■■□□□ 1.98
UBXN1-215ENST00000533476 PLEKHD1A6NEE1 506 aa27.42■■□□□ 1.98
UBXN1-215ENST00000533476 SHROOM2Q13796 1616 aa27.42■■□□□ 1.98
UBXN1-215ENST00000533476 PTPRGP23470 1445 aa27.4■■□□□ 1.98
UBXN1-215ENST00000533476 NCOA1Q15788 1441 aa27.4■■□□□ 1.98
UBXN1-215ENST00000533476 DDX10Q13206 875 aaKnown RBP27.39■■□□□ 1.97
UBXN1-215ENST00000533476 OSCARQ8IYS5 282 aa27.37■■□□□ 1.97
UBXN1-215ENST00000533476 ANKRD30BQ9BXX2 1392 aa27.37■■□□□ 1.97
UBXN1-215ENST00000533476 SHANK2Q9UPX8 1470 aa27.36■■□□□ 1.97
UBXN1-215ENST00000533476 RPRD2Q5VT52 1461 aaKnown RBP27.34■■□□□ 1.97
UBXN1-215ENST00000533476 PZPP20742 1482 aa27.33■■□□□ 1.97
UBXN1-215ENST00000533476 HIRIP3Q9BW71 556 aaPredicted RBP27.32■■□□□ 1.96
UBXN1-215ENST00000533476 ZNF777Q9ULD5 760 aaPredicted RBP27.32■■□□□ 1.96
UBXN1-215ENST00000533476 ANKRD30AQ9BXX3 1397 aa27.32■■□□□ 1.96
UBXN1-215ENST00000533476 FOXD1Q16676 465 aa27.28■■□□□ 1.96
UBXN1-215ENST00000533476 ARHGEF5Q12774 1597 aa27.27■■□□□ 1.96
UBXN1-215ENST00000533476 TEX14Q8IWB6 1497 aa27.27■■□□□ 1.96
UBXN1-215ENST00000533476 SLC4A1APQ9BWU0 796 aaKnown RBP27.27■■□□□ 1.96
UBXN1-215ENST00000533476 C9orf84Q5VXU9 1444 aa27.25■■□□□ 1.95
UBXN1-215ENST00000533476 PREX2Q70Z35 1606 aa27.25■■□□□ 1.95
UBXN1-215ENST00000533476 L3MBTL2Q969R5 705 aa27.24■■□□□ 1.95
UBXN1-215ENST00000533476 ANKRD50Q9ULJ7 1429 aa27.22■■□□□ 1.95
UBXN1-215ENST00000533476 CDC42BPBQ9Y5S2 1711 aa27.19■■□□□ 1.94
UBXN1-215ENST00000533476 ABCC2Q92887 1545 aa27.19■■□□□ 1.94
UBXN1-215ENST00000533476 KIAA1107Q9UPP5 1409 aa27.19■■□□□ 1.94
UBXN1-215ENST00000533476 KCNH8Q96L42 1107 aa27.18■■□□□ 1.94
UBXN1-215ENST00000533476 SAMD9LQ8IVG5 1584 aa27.17■■□□□ 1.94
UBXN1-215ENST00000533476 CCER2I3L3R5 266 aa27.17■■□□□ 1.94
UBXN1-215ENST00000533476 ERCC6L2Q5T890 1561 aa27.17■■□□□ 1.94
UBXN1-215ENST00000533476 MBD5Q9P267 1494 aa27.17■■□□□ 1.94
UBXN1-215ENST00000533476 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
UBXN1-215ENST00000533476 KDM5DQ9BY66 1539 aa27.16■■□□□ 1.94
UBXN1-215ENST00000533476 ANP32CO43423 234 aa27.16■■□□□ 1.94
UBXN1-215ENST00000533476 HSPA5P11021 654 aaKnown RBP27.15■■□□□ 1.94
UBXN1-215ENST00000533476 EIF4G2P78344 907 aaKnown RBP eCLIP27.13■■□□□ 1.93
UBXN1-215ENST00000533476 CCDC141Q6ZP82 1450 aa27.13■■□□□ 1.93
UBXN1-215ENST00000533476 TTC37Q6PGP7 1564 aa27.11■■□□□ 1.93
UBXN1-215ENST00000533476 TSPY4P0CV99 314 aa27.11■■□□□ 1.93
UBXN1-215ENST00000533476 TSPY10P0CW01 314 aa27.11■■□□□ 1.93
UBXN1-215ENST00000533476 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.09■■□□□ 1.93
UBXN1-215ENST00000533476 KIF15Q9NS87 1388 aa27.08■■□□□ 1.93
UBXN1-215ENST00000533476 NBPF8Q3BBV2 869 aa27.06■■□□□ 1.92
UBXN1-215ENST00000533476 WASHC2AQ641Q2 1341 aa27.06■■□□□ 1.92
UBXN1-215ENST00000533476 HNRNPMP52272 730 aaKnown RBP eCLIP27.06■■□□□ 1.92
UBXN1-215ENST00000533476 PKD2Q13563 968 aa27.06■■□□□ 1.92
UBXN1-215ENST00000533476 RSPH4AQ5TD94 716 aa27.06■■□□□ 1.92
UBXN1-215ENST00000533476 MAST1Q9Y2H9 1570 aa27.06■■□□□ 1.92
UBXN1-215ENST00000533476 MYO5CQ9NQX4 1742 aa27.05■■□□□ 1.92
UBXN1-215ENST00000533476 ARHGAP5Q13017 1502 aa27.03■■□□□ 1.92
UBXN1-215ENST00000533476 DNAJC5Q9H3Z4 198 aa27.03■■□□□ 1.92
UBXN1-215ENST00000533476 NUP155O75694 1391 aa27.03■■□□□ 1.92
UBXN1-215ENST00000533476 UHRF1BP1LA0JNW5 1464 aa27.03■■□□□ 1.92
UBXN1-215ENST00000533476 SYCP2Q9BX26 1530 aa27.02■■□□□ 1.92
UBXN1-215ENST00000533476 SPATA31E1Q6ZUB1 1445 aa27■■□□□ 1.91
UBXN1-215ENST00000533476 ZCCHC11Q5TAX3 1644 aaKnown RBP27■■□□□ 1.91
UBXN1-215ENST00000533476 PLEKHH2Q8IVE3 1493 aa26.99■■□□□ 1.91
UBXN1-215ENST00000533476 POLR1AO95602 1720 aaPredicted RBP26.99■■□□□ 1.91
UBXN1-215ENST00000533476 CNTLNQ9NXG0 1405 aa26.97■■□□□ 1.91
UBXN1-215ENST00000533476 CCDC7Q96M83 1385 aa26.96■■□□□ 1.91
UBXN1-215ENST00000533476 PLXNC1O60486 1568 aa26.95■■□□□ 1.91
UBXN1-215ENST00000533476 ARHGEF12Q9NZN5 1544 aa26.95■■□□□ 1.9
UBXN1-215ENST00000533476 RIMBP3CA6NJZ7 1639 aa26.92■■□□□ 1.9
UBXN1-215ENST00000533476 RIMBP3BA6NNM3 1639 aa26.92■■□□□ 1.9
UBXN1-215ENST00000533476 RIMBP3Q9UFD9 1639 aa26.92■■□□□ 1.9
UBXN1-215ENST00000533476 UNC13BO14795 1591 aa26.92■■□□□ 1.9
UBXN1-215ENST00000533476 FAM135AQ9P2D6 1515 aa26.91■■□□□ 1.9
UBXN1-215ENST00000533476 UHRF1BP1Q6BDS2 1440 aa26.91■■□□□ 1.9
UBXN1-215ENST00000533476 PLCH2O75038 1416 aa26.88■■□□□ 1.89
UBXN1-215ENST00000533476 C11orf95C9JLR9 678 aaPredicted RBP26.87■■□□□ 1.89
UBXN1-215ENST00000533476 RALGAPBQ86X10 1494 aa26.85■■□□□ 1.89
UBXN1-215ENST00000533476 SUPT16HQ9Y5B9 1047 aaKnown RBP26.84■■□□□ 1.89
UBXN1-215ENST00000533476 KDM5CP41229 1560 aa26.83■■□□□ 1.89
UBXN1-215ENST00000533476 ABCC1P33527 1531 aa26.82■■□□□ 1.88
UBXN1-215ENST00000533476 DUOX2Q9NRD8 1548 aa26.82■■□□□ 1.88
UBXN1-215ENST00000533476 KIF7Q2M1P5 1343 aa26.81■■□□□ 1.88
UBXN1-215ENST00000533476 CYB5RLQ6IPT4 315 aa26.81■■□□□ 1.88
UBXN1-215ENST00000533476 IQGAP3Q86VI3 1631 aa26.81■■□□□ 1.88
UBXN1-215ENST00000533476 USP47Q96K76 1375 aa26.8■■□□□ 1.88
UBXN1-215ENST00000533476 ARAP3Q8WWN8 1544 aa26.8■■□□□ 1.88
UBXN1-215ENST00000533476 ERBINQ96RT1 1412 aa26.77■■□□□ 1.88
UBXN1-215ENST00000533476 EFCAB2Q5VUJ9 269 aa26.77■■□□□ 1.88
UBXN1-215ENST00000533476 MAGI2Q86UL8 1455 aa26.77■■□□□ 1.88
UBXN1-215ENST00000533476 BCORL1Q5H9F3 1711 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms