RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 ARID3CA6NKF2 412 aa11.79□□□□□ -0.52
TRIM53BP-201ENST00000532912 FOXD1Q16676 465 aa11.79□□□□□ -0.52
TRIM53BP-201ENST00000532912 HIRIP3Q9BW71 556 aaPredicted RBP11.79□□□□□ -0.52
TRIM53BP-201ENST00000532912 PLB1Q6P1J6 1458 aa11.79□□□□□ -0.52
TRIM53BP-201ENST00000532912 PRG4Q92954 1404 aaPredicted RBP11.78□□□□□ -0.52
TRIM53BP-201ENST00000532912 ITSN2Q9NZM3 1697 aa11.78□□□□□ -0.52
TRIM53BP-201ENST00000532912 MPHOSPH9Q99550 1183 aa11.77□□□□□ -0.52
TRIM53BP-201ENST00000532912 CCER2I3L3R5 266 aa11.77□□□□□ -0.53
TRIM53BP-201ENST00000532912 KIF14Q15058 1648 aa11.77□□□□□ -0.53
TRIM53BP-201ENST00000532912 GPATCH8Q9UKJ3 1502 aaKnown RBP11.77□□□□□ -0.53
TRIM53BP-201ENST00000532912 ZNF644Q9H582 1327 aaPredicted RBP11.76□□□□□ -0.53
TRIM53BP-201ENST00000532912 CAMSAP2Q08AD1 1489 aa11.76□□□□□ -0.53
TRIM53BP-201ENST00000532912 ANKRD30BQ9BXX2 1392 aa11.76□□□□□ -0.53
TRIM53BP-201ENST00000532912 ABCA8O94911 1581 aa11.76□□□□□ -0.53
TRIM53BP-201ENST00000532912 CROCC2H7BZ55 1655 aa11.75□□□□□ -0.53
TRIM53BP-201ENST00000532912 CDK11AQ9UQ88 783 aaPredicted RBP11.75□□□□□ -0.53
TRIM53BP-201ENST00000532912 SUPT16HQ9Y5B9 1047 aaKnown RBP11.75□□□□□ -0.53
TRIM53BP-201ENST00000532912 ADGRL2O95490 1459 aa11.75□□□□□ -0.53
TRIM53BP-201ENST00000532912 RPRD2Q5VT52 1461 aaKnown RBP11.75□□□□□ -0.53
TRIM53BP-201ENST00000532912 ADGBQ8N7X0 1667 aa11.75□□□□□ -0.53
TRIM53BP-201ENST00000532912 CHMP7Q8WUX9 453 aaPredicted RBP11.74□□□□□ -0.53
TRIM53BP-201ENST00000532912 TEX14Q8IWB6 1497 aa11.74□□□□□ -0.53
TRIM53BP-201ENST00000532912 CARMIL2Q6F5E8 1435 aa11.74□□□□□ -0.53
TRIM53BP-201ENST00000532912 TRIM52Q96A61 297 aa11.74□□□□□ -0.53
TRIM53BP-201ENST00000532912 PZPP20742 1482 aa11.73□□□□□ -0.53
TRIM53BP-201ENST00000532912 NCOA1Q15788 1441 aa11.73□□□□□ -0.53
TRIM53BP-201ENST00000532912 JPH4Q96JJ6 628 aa11.72□□□□□ -0.53
TRIM53BP-201ENST00000532912 ABCC10Q5T3U5 1492 aa11.72□□□□□ -0.53
TRIM53BP-201ENST00000532912 CDC42BPAQ5VT25 1732 aa11.7□□□□□ -0.54
TRIM53BP-201ENST00000532912 ANP32CO43423 234 aa11.7□□□□□ -0.54
TRIM53BP-201ENST00000532912 L3MBTL2Q969R5 705 aa11.7□□□□□ -0.54
TRIM53BP-201ENST00000532912 HSPA5P11021 654 aaKnown RBP11.69□□□□□ -0.54
TRIM53BP-201ENST00000532912 WASHC2AQ641Q2 1341 aa11.69□□□□□ -0.54
TRIM53BP-201ENST00000532912 ATP10BO94823 1461 aa11.69□□□□□ -0.54
TRIM53BP-201ENST00000532912 DNAJC5Q9H3Z4 198 aa11.69□□□□□ -0.54
TRIM53BP-201ENST00000532912 CFDP1Q9UEE9 299 aaPredicted RBP11.69□□□□□ -0.54
TRIM53BP-201ENST00000532912 SHANK2Q9UPX8 1470 aa11.67□□□□□ -0.54
TRIM53BP-201ENST00000532912 MBD5Q9P267 1494 aa11.67□□□□□ -0.54
TRIM53BP-201ENST00000532912 SPATA31E1Q6ZUB1 1445 aa11.66□□□□□ -0.54
TRIM53BP-201ENST00000532912 FBLN2P98095 1184 aa11.66□□□□□ -0.54
TRIM53BP-201ENST00000532912 NBPF8Q3BBV2 869 aa11.66□□□□□ -0.54
TRIM53BP-201ENST00000532912 EIF4G2P78344 907 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRIM53BP-201ENST00000532912 SLC4A1APQ9BWU0 796 aaKnown RBP11.64□□□□□ -0.55
TRIM53BP-201ENST00000532912 CNTLNQ9NXG0 1405 aa11.64□□□□□ -0.55
TRIM53BP-201ENST00000532912 KIAA1107Q9UPP5 1409 aa11.64□□□□□ -0.55
TRIM53BP-201ENST00000532912 POLR1AO95602 1720 aaPredicted RBP11.64□□□□□ -0.55
TRIM53BP-201ENST00000532912 KDM5DQ9BY66 1539 aa11.64□□□□□ -0.55
TRIM53BP-201ENST00000532912 ANKRD30AQ9BXX3 1397 aa11.63□□□□□ -0.55
TRIM53BP-201ENST00000532912 ARHGEF5Q12774 1597 aa11.63□□□□□ -0.55
TRIM53BP-201ENST00000532912 CCDC7Q96M83 1385 aa11.62□□□□□ -0.55
TRIM53BP-201ENST00000532912 ANKRD50Q9ULJ7 1429 aa11.62□□□□□ -0.55
TRIM53BP-201ENST00000532912 C11orf95C9JLR9 678 aaPredicted RBP11.62□□□□□ -0.55
TRIM53BP-201ENST00000532912 C9orf84Q5VXU9 1444 aa11.61□□□□□ -0.55
TRIM53BP-201ENST00000532912 PLEKHD1A6NEE1 506 aa11.61□□□□□ -0.55
TRIM53BP-201ENST00000532912 SHROOM2Q13796 1616 aa11.61□□□□□ -0.55
TRIM53BP-201ENST00000532912 PTPRGP23470 1445 aa11.6□□□□□ -0.55
TRIM53BP-201ENST00000532912 PREX2Q70Z35 1606 aa11.59□□□□□ -0.55
TRIM53BP-201ENST00000532912 MSH5O43196 834 aa11.59□□□□□ -0.55
TRIM53BP-201ENST00000532912 ZNF777Q9ULD5 760 aaPredicted RBP11.59□□□□□ -0.55
TRIM53BP-201ENST00000532912 CHD1O14646 1710 aa11.59□□□□□ -0.55
TRIM53BP-201ENST00000532912 CDC42BPBQ9Y5S2 1711 aa11.59□□□□□ -0.55
TRIM53BP-201ENST00000532912 SAMD9LQ8IVG5 1584 aa11.58□□□□□ -0.56
TRIM53BP-201ENST00000532912 UHRF1BP1Q6BDS2 1440 aa11.57□□□□□ -0.56
TRIM53BP-201ENST00000532912 PKD2Q13563 968 aa11.56□□□□□ -0.56
TRIM53BP-201ENST00000532912 KIF7Q2M1P5 1343 aa11.56□□□□□ -0.56
TRIM53BP-201ENST00000532912 KDM5CP41229 1560 aa11.55□□□□□ -0.56
TRIM53BP-201ENST00000532912 ARHGEF12Q9NZN5 1544 aa11.55□□□□□ -0.56
TRIM53BP-201ENST00000532912 CCDC141Q6ZP82 1450 aa11.55□□□□□ -0.56
TRIM53BP-201ENST00000532912 BCORL1Q5H9F3 1711 aa11.54□□□□□ -0.56
TRIM53BP-201ENST00000532912 MAST1Q9Y2H9 1570 aa11.54□□□□□ -0.56
TRIM53BP-201ENST00000532912 PRKRIP1Q9H875 184 aaPredicted RBP11.54□□□□□ -0.56
TRIM53BP-201ENST00000532912 KIF15Q9NS87 1388 aa11.53□□□□□ -0.56
TRIM53BP-201ENST00000532912 RALGAPBQ86X10 1494 aa11.53□□□□□ -0.56
TRIM53BP-201ENST00000532912 FKBP8Q14318 412 aa11.53□□□□□ -0.56
TRIM53BP-201ENST00000532912 TTC37Q6PGP7 1564 aa11.53□□□□□ -0.56
TRIM53BP-201ENST00000532912 NUP155O75694 1391 aa11.53□□□□□ -0.56
TRIM53BP-201ENST00000532912 CCDC184Q52MB2 194 aa11.52□□□□□ -0.56
TRIM53BP-201ENST00000532912 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRIM53BP-201ENST00000532912 TSHZ2Q9NRE2 1034 aa11.52□□□□□ -0.57
TRIM53BP-201ENST00000532912 ABCC2Q92887 1545 aa11.51□□□□□ -0.57
TRIM53BP-201ENST00000532912 ERCC6L2Q5T890 1561 aa11.51□□□□□ -0.57
TRIM53BP-201ENST00000532912 HNRNPMP52272 730 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRIM53BP-201ENST00000532912 DHX29Q7Z478 1369 aaKnown RBP11.51□□□□□ -0.57
TRIM53BP-201ENST00000532912 USP47Q96K76 1375 aa11.51□□□□□ -0.57
TRIM53BP-201ENST00000532912 TSPY4P0CV99 314 aa11.5□□□□□ -0.57
TRIM53BP-201ENST00000532912 TSPY10P0CW01 314 aa11.5□□□□□ -0.57
TRIM53BP-201ENST00000532912 UNC13BO14795 1591 aa11.5□□□□□ -0.57
TRIM53BP-201ENST00000532912 SYCP2Q9BX26 1530 aa11.49□□□□□ -0.57
TRIM53BP-201ENST00000532912 FAM135AQ9P2D6 1515 aa11.49□□□□□ -0.57
TRIM53BP-201ENST00000532912 RSPH4AQ5TD94 716 aa11.49□□□□□ -0.57
TRIM53BP-201ENST00000532912 HNRNPUQ00839 825 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRIM53BP-201ENST00000532912 PLXNC1O60486 1568 aa11.48□□□□□ -0.57
TRIM53BP-201ENST00000532912 ARID4BQ4LE39 1312 aaPredicted RBP11.48□□□□□ -0.57
TRIM53BP-201ENST00000532912 MYO5CQ9NQX4 1742 aa11.47□□□□□ -0.57
TRIM53BP-201ENST00000532912 CLASP1Q7Z460 1538 aa11.47□□□□□ -0.57
TRIM53BP-201ENST00000532912 BCANQ96GW7 911 aa11.46□□□□□ -0.57
TRIM53BP-201ENST00000532912 ARHGAP5Q13017 1502 aa11.46□□□□□ -0.58
TRIM53BP-201ENST00000532912 MAGI2Q86UL8 1455 aa11.46□□□□□ -0.58
TRIM53BP-201ENST00000532912 PLA2R1Q13018 1463 aa11.45□□□□□ -0.58
TRIM53BP-201ENST00000532912 PLEKHH2Q8IVE3 1493 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms