RNA–Protein interactions for RNA: ENST00000532886.2

AP004608.1-204, humanhuman

TSL 2

Gene AP004608.1, Length 4,435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-204ENST00000532886 TMF1P82094 1093 aa16.75■□□□□ 0.27
AP004608.1-204ENST00000532886 RSPH4AQ5TD94 716 aa16.74■□□□□ 0.27
AP004608.1-204ENST00000532886 PTPRGP23470 1445 aa16.74■□□□□ 0.27
AP004608.1-204ENST00000532886 IFT140Q96RY7 1462 aa16.74■□□□□ 0.27
AP004608.1-204ENST00000532886 LRRC9Q6ZRR7 1453 aa16.71■□□□□ 0.27
AP004608.1-204ENST00000532886 ABCA10Q8WWZ4 1543 aa16.71■□□□□ 0.27
AP004608.1-204ENST00000532886 GRIN2BQ13224 1484 aa16.69■□□□□ 0.26
AP004608.1-204ENST00000532886 FGD6Q6ZV73 1430 aa16.69■□□□□ 0.26
AP004608.1-204ENST00000532886 KIF3BO15066 747 aa16.69■□□□□ 0.26
AP004608.1-204ENST00000532886 POLA1P09884 1462 aaPredicted RBP16.69■□□□□ 0.26
AP004608.1-204ENST00000532886 CUL7Q14999 1698 aa16.69■□□□□ 0.26
AP004608.1-204ENST00000532886 CFAP53Q96M91 514 aa16.69■□□□□ 0.26
AP004608.1-204ENST00000532886 POGKQ9P215 609 aa16.69■□□□□ 0.26
AP004608.1-204ENST00000532886 SPAG9O60271 1321 aaKnown RBP16.67■□□□□ 0.26
AP004608.1-204ENST00000532886 ZNF644Q9H582 1327 aaPredicted RBP16.67■□□□□ 0.26
AP004608.1-204ENST00000532886 CASKIN1Q8WXD9 1431 aa16.67■□□□□ 0.26
AP004608.1-204ENST00000532886 MLECQ14165 292 aa16.67■□□□□ 0.26
AP004608.1-204ENST00000532886 TNNT2P45379 298 aaPredicted RBP16.66■□□□□ 0.26
AP004608.1-204ENST00000532886 MYOM3Q5VTT5 1437 aa16.65■□□□□ 0.26
AP004608.1-204ENST00000532886 NEUROD2Q15784 382 aa16.65■□□□□ 0.26
AP004608.1-204ENST00000532886 ROCK2O75116 1388 aaKnown RBP16.65■□□□□ 0.26
AP004608.1-204ENST00000532886 PPM1GO15355 546 aaPredicted RBP16.64■□□□□ 0.25
AP004608.1-204ENST00000532886 WDR97A6NE52 1622 aa16.63■□□□□ 0.25
AP004608.1-204ENST00000532886 SAFB2Q14151 953 aaKnown RBP eCLIP16.6■□□□□ 0.25
AP004608.1-204ENST00000532886 UPF2Q9HAU5 1272 aaKnown RBP16.59■□□□□ 0.25
AP004608.1-204ENST00000532886 PLEKHG5O94827 1062 aa16.59■□□□□ 0.25
AP004608.1-204ENST00000532886 NCOA2Q15596 1464 aa16.59■□□□□ 0.25
AP004608.1-204ENST00000532886 RRBP1Q9P2E9 1410 aaKnown RBP16.59■□□□□ 0.25
AP004608.1-204ENST00000532886 C14orf37Q86TY3 774 aa16.59■□□□□ 0.25
AP004608.1-204ENST00000532886 PPP4R2Q9NY27 417 aa16.59■□□□□ 0.25
AP004608.1-204ENST00000532886 URB2Q14146 1524 aaKnown RBP16.58■□□□□ 0.24
AP004608.1-204ENST00000532886 FYCO1Q9BQS8 1478 aa16.56■□□□□ 0.24
AP004608.1-204ENST00000532886 STK26Q9P289 416 aa16.55■□□□□ 0.24
AP004608.1-204ENST00000532886 NUDCQ9Y266 331 aa16.55■□□□□ 0.24
AP004608.1-204ENST00000532886 SRPK2P78362 688 aaKnown RBP16.55■□□□□ 0.24
AP004608.1-204ENST00000532886 KIF21AQ7Z4S6 1674 aa16.54■□□□□ 0.24
AP004608.1-204ENST00000532886 ST20-MTHFSA0A0A6YYL1 179 aa16.54■□□□□ 0.24
AP004608.1-204ENST00000532886 KTN1Q86UP2 1357 aaKnown RBP16.54■□□□□ 0.24
AP004608.1-204ENST00000532886 B4GALNT3Q6L9W6 998 aa16.53■□□□□ 0.24
AP004608.1-204ENST00000532886 UACAQ9BZF9 1416 aa16.53■□□□□ 0.24
AP004608.1-204ENST00000532886 EFCAB5A4FU69 1503 aa16.53■□□□□ 0.24
AP004608.1-204ENST00000532886 ZBTB7CA1YPR0 619 aa16.53■□□□□ 0.24
AP004608.1-204ENST00000532886 U2SURPO15042 1029 aaKnown RBP16.52■□□□□ 0.23
AP004608.1-204ENST00000532886 MAPK8IP3Q9UPT6 1336 aa16.51■□□□□ 0.23
AP004608.1-204ENST00000532886 RALBP1Q15311 655 aa16.51■□□□□ 0.23
AP004608.1-204ENST00000532886 MORC1Q86VD1 984 aa16.51■□□□□ 0.23
AP004608.1-204ENST00000532886 CCDC144AA2RUR9 1427 aa16.51■□□□□ 0.23
AP004608.1-204ENST00000532886 WASHC2CQ9Y4E1 1318 aa16.51■□□□□ 0.23
AP004608.1-204ENST00000532886 FAM69CQ0P6D2 419 aa16.5■□□□□ 0.23
AP004608.1-204ENST00000532886 HDGFP51858 240 aaKnown RBP16.5■□□□□ 0.23
AP004608.1-204ENST00000532886 HSP90AA1P07900 732 aaKnown RBP16.48■□□□□ 0.23
AP004608.1-204ENST00000532886 WDR62O43379 1518 aa16.48■□□□□ 0.23
AP004608.1-204ENST00000532886 ABCA5Q8WWZ7 1642 aa16.47■□□□□ 0.23
AP004608.1-204ENST00000532886 FRAT1Q92837 279 aaPredicted RBP16.46■□□□□ 0.23
AP004608.1-204ENST00000532886 LAS1LQ9Y4W2 734 aaKnown RBP16.46■□□□□ 0.23
AP004608.1-204ENST00000532886 KIF15Q9NS87 1388 aa16.46■□□□□ 0.23
AP004608.1-204ENST00000532886 NUTM2DQ5VT03 806 aaPredicted RBP16.46■□□□□ 0.22
AP004608.1-204ENST00000532886 TIAM1Q13009 1591 aa16.45■□□□□ 0.22
AP004608.1-204ENST00000532886 PRKRIP1Q9H875 184 aaPredicted RBP16.44■□□□□ 0.22
AP004608.1-204ENST00000532886 NBR1Q14596 966 aa16.44■□□□□ 0.22
AP004608.1-204ENST00000532886 MYH16Q9H6N6 1097 aa16.44■□□□□ 0.22
AP004608.1-204ENST00000532886 ANKRD50Q9ULJ7 1429 aa16.44■□□□□ 0.22
AP004608.1-204ENST00000532886 USP47Q96K76 1375 aa16.43■□□□□ 0.22
AP004608.1-204ENST00000532886 PRG4Q92954 1404 aaPredicted RBP16.43■□□□□ 0.22
AP004608.1-204ENST00000532886 NLRP13Q86W25 1043 aa16.43■□□□□ 0.22
AP004608.1-204ENST00000532886 SNAPC4Q5SXM2 1469 aa16.43■□□□□ 0.22
AP004608.1-204ENST00000532886 FTSJ3Q8IY81 847 aaKnown RBP16.43■□□□□ 0.22
AP004608.1-204ENST00000532886 CTTNBP2Q8WZ74 1663 aa16.41■□□□□ 0.22
AP004608.1-204ENST00000532886 MAP3K1Q13233 1512 aa16.41■□□□□ 0.22
AP004608.1-204ENST00000532886 TRAK1Q9UPV9 953 aa16.4■□□□□ 0.22
AP004608.1-204ENST00000532886 EIF3AQ14152 1382 aaKnown RBP16.4■□□□□ 0.22
AP004608.1-204ENST00000532886 PANK3Q9H999 370 aa16.39■□□□□ 0.21
AP004608.1-204ENST00000532886 LMOD2Q6P5Q4 547 aa16.38■□□□□ 0.21
AP004608.1-204ENST00000532886 SOX12O15370 315 aa16.38■□□□□ 0.21
AP004608.1-204ENST00000532886 RGS3P49796 1198 aa16.38■□□□□ 0.21
AP004608.1-204ENST00000532886 AEBP2Q6ZN18 517 aaPredicted RBP16.38■□□□□ 0.21
AP004608.1-204ENST00000532886 TARBP1Q13395 1621 aaKnown RBP16.38■□□□□ 0.21
AP004608.1-204ENST00000532886 HDGFL2Q7Z4V5 671 aaPredicted RBP16.37■□□□□ 0.21
AP004608.1-204ENST00000532886 AFAP1Q8N556 730 aa16.37■□□□□ 0.21
AP004608.1-204ENST00000532886 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
AP004608.1-204ENST00000532886 RCAN3Q9UKA8 241 aa16.37■□□□□ 0.21
AP004608.1-204ENST00000532886 MIA2Q96PC5 1412 aa16.36■□□□□ 0.21
AP004608.1-204ENST00000532886 EHBP1L1Q8N3D4 1523 aa16.36■□□□□ 0.21
AP004608.1-204ENST00000532886 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
AP004608.1-204ENST00000532886 PNNQ9H307 717 aaKnown RBP16.36■□□□□ 0.21
AP004608.1-204ENST00000532886 KIAA0586Q9BVV6 1533 aa16.35■□□□□ 0.21
AP004608.1-204ENST00000532886 U2AF1L5P0DN76 240 aaPredicted RBP16.35■□□□□ 0.21
AP004608.1-204ENST00000532886 U2AF1Q01081 240 aaKnown RBP eCLIP16.35■□□□□ 0.21
AP004608.1-204ENST00000532886 HFM1A2PYH4 1435 aa16.35■□□□□ 0.21
AP004608.1-204ENST00000532886 PBRM1Q86U86 1689 aa16.35■□□□□ 0.21
AP004608.1-204ENST00000532886 ERICH6BQ5W0A0 696 aa16.33■□□□□ 0.2
AP004608.1-204ENST00000532886 MYBBP1AQ9BQG0 1328 aaKnown RBP16.33■□□□□ 0.2
AP004608.1-204ENST00000532886 KIF7Q2M1P5 1343 aa16.32■□□□□ 0.2
AP004608.1-204ENST00000532886 MAGI1Q96QZ7 1491 aaPredicted RBP16.32■□□□□ 0.2
AP004608.1-204ENST00000532886 CCDC7Q96M83 1385 aa16.31■□□□□ 0.2
AP004608.1-204ENST00000532886 EPRSP07814 1512 aaKnown RBP16.31■□□□□ 0.2
AP004608.1-204ENST00000532886 ADAMTS12P58397 1594 aa16.31■□□□□ 0.2
AP004608.1-204ENST00000532886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.31■□□□□ 0.2
AP004608.1-204ENST00000532886 CDK13Q14004 1512 aaKnown RBP16.3■□□□□ 0.2
AP004608.1-204ENST00000532886 PCF11O94913 1555 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms