RNA–Protein interactions for RNA: ENST00000532536.5

SHARPIN-206, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 3

Gene SHARPIN, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-206ENST00000532536 GOLGA3Q08378 1498 aa11.44□□□□□ -0.58
SHARPIN-206ENST00000532536 CTTNBP2Q8WZ74 1663 aa11.43□□□□□ -0.58
SHARPIN-206ENST00000532536 CEBPAP49715 358 aaPredicted RBP11.43□□□□□ -0.58
SHARPIN-206ENST00000532536 MLECQ14165 292 aa11.43□□□□□ -0.58
SHARPIN-206ENST00000532536 HECW1Q76N89 1606 aa11.42□□□□□ -0.58
SHARPIN-206ENST00000532536 ZNF335Q9H4Z2 1342 aaPredicted RBP11.4□□□□□ -0.58
SHARPIN-206ENST00000532536 C9orf84Q5VXU9 1444 aa11.39□□□□□ -0.59
SHARPIN-206ENST00000532536 CAMSAP1Q5T5Y3 1602 aa11.38□□□□□ -0.59
SHARPIN-206ENST00000532536 ATP10AO60312 1499 aa11.38□□□□□ -0.59
SHARPIN-206ENST00000532536 RAPGEF2Q9Y4G8 1499 aa11.38□□□□□ -0.59
SHARPIN-206ENST00000532536 SRCAPQ6ZRS2 3230 aa11.37□□□□□ -0.59
SHARPIN-206ENST00000532536 TRAPPC8Q9Y2L5 1435 aa11.35□□□□□ -0.59
SHARPIN-206ENST00000532536 RGS17Q9UGC6 210 aaPredicted RBP11.33□□□□□ -0.6
SHARPIN-206ENST00000532536 ZNF142P52746 1687 aaPredicted RBP11.33□□□□□ -0.6
SHARPIN-206ENST00000532536 SCAF1Q9H7N4 1312 aaKnown RBP11.33□□□□□ -0.6
SHARPIN-206ENST00000532536 PLA2R1Q13018 1463 aa11.32□□□□□ -0.6
SHARPIN-206ENST00000532536 ALKQ9UM73 1620 aa11.32□□□□□ -0.6
SHARPIN-206ENST00000532536 TOM1O60784 492 aa11.32□□□□□ -0.6
SHARPIN-206ENST00000532536 PIP4K2BP78356 416 aa11.32□□□□□ -0.6
SHARPIN-206ENST00000532536 REREQ9P2R6 1566 aa11.32□□□□□ -0.6
SHARPIN-206ENST00000532536 CPS1P31327 1500 aa11.31□□□□□ -0.6
SHARPIN-206ENST00000532536 SUPT6HQ7KZ85 1726 aaKnown RBP11.31□□□□□ -0.6
SHARPIN-206ENST00000532536 TCOF1Q13428 1488 aaKnown RBP11.31□□□□□ -0.6
SHARPIN-206ENST00000532536 ARID3CA6NKF2 412 aa11.3□□□□□ -0.6
SHARPIN-206ENST00000532536 RAPGEF6Q8TEU7 1601 aa11.3□□□□□ -0.6
SHARPIN-206ENST00000532536 AGLP35573 1532 aa11.3□□□□□ -0.6
SHARPIN-206ENST00000532536 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.3□□□□□ -0.6
SHARPIN-206ENST00000532536 SETD1AO15047 1707 aaKnown RBP11.29□□□□□ -0.6
SHARPIN-206ENST00000532536 NPATQ14207 1427 aa11.28□□□□□ -0.6
SHARPIN-206ENST00000532536 MROH2AA6NES4 1674 aa11.28□□□□□ -0.6
SHARPIN-206ENST00000532536 PKD2Q13563 968 aa11.27□□□□□ -0.61
SHARPIN-206ENST00000532536 NCKAP5LQ9HCH0 1330 aa11.27□□□□□ -0.61
SHARPIN-206ENST00000532536 PTPRKQ15262 1439 aa11.26□□□□□ -0.61
SHARPIN-206ENST00000532536 SCAPERQ9BY12 1400 aa11.26□□□□□ -0.61
SHARPIN-206ENST00000532536 DIP2CQ9Y2E4 1556 aa11.26□□□□□ -0.61
SHARPIN-206ENST00000532536 KDM5CP41229 1560 aa11.25□□□□□ -0.61
SHARPIN-206ENST00000532536 MYO3AQ8NEV4 1616 aa11.25□□□□□ -0.61
SHARPIN-206ENST00000532536 CNTLNQ9NXG0 1405 aa11.25□□□□□ -0.61
SHARPIN-206ENST00000532536 FAM9AQ8IZU1 332 aaPredicted RBP11.24□□□□□ -0.61
SHARPIN-206ENST00000532536 NUP153P49790 1475 aaKnown RBP11.24□□□□□ -0.61
SHARPIN-206ENST00000532536 CEP170BQ9Y4F5 1589 aaPredicted RBP11.23□□□□□ -0.61
SHARPIN-206ENST00000532536 POLR1AO95602 1720 aaPredicted RBP11.22□□□□□ -0.61
SHARPIN-206ENST00000532536 ZNF518AQ6AHZ1 1483 aa11.22□□□□□ -0.61
SHARPIN-206ENST00000532536 PPP6R1Q9UPN7 881 aa11.22□□□□□ -0.61
SHARPIN-206ENST00000532536 ABCA6Q8N139 1617 aa11.21□□□□□ -0.61
SHARPIN-206ENST00000532536 SHANK2Q9UPX8 1470 aa11.21□□□□□ -0.61
SHARPIN-206ENST00000532536 POTEAQ6S8J7 498 aa11.21□□□□□ -0.61
SHARPIN-206ENST00000532536 SAMD9Q5K651 1589 aa11.2□□□□□ -0.62
SHARPIN-206ENST00000532536 PLCH2O75038 1416 aa11.19□□□□□ -0.62
SHARPIN-206ENST00000532536 RNF17Q9BXT8 1623 aaKnown RBP11.18□□□□□ -0.62
SHARPIN-206ENST00000532536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.18□□□□□ -0.62
SHARPIN-206ENST00000532536 HNRNPUL2Q1KMD3 747 aaKnown RBP11.18□□□□□ -0.62
SHARPIN-206ENST00000532536 CHIC1Q5VXU3 224 aa11.18□□□□□ -0.62
SHARPIN-206ENST00000532536 ESF1Q9H501 851 aaKnown RBP11.18□□□□□ -0.62
SHARPIN-206ENST00000532536 NEURL4Q96JN8 1562 aa11.18□□□□□ -0.62
SHARPIN-206ENST00000532536 MYO5CQ9NQX4 1742 aa11.18□□□□□ -0.62
SHARPIN-206ENST00000532536 VWDEQ8N2E2 1590 aa11.17□□□□□ -0.62
SHARPIN-206ENST00000532536 PLEKHD1A6NEE1 506 aa11.16□□□□□ -0.62
SHARPIN-206ENST00000532536 MLH3Q9UHC1 1453 aa11.15□□□□□ -0.62
SHARPIN-206ENST00000532536 UPF1Q92900 1129 aaKnown RBP eCLIP11.14□□□□□ -0.63
SHARPIN-206ENST00000532536 SYNMO15061 1565 aa11.14□□□□□ -0.63
SHARPIN-206ENST00000532536 DNMT1P26358 1616 aaKnown RBP11.13□□□□□ -0.63
SHARPIN-206ENST00000532536 ZMYM3Q14202 1370 aa11.12□□□□□ -0.63
SHARPIN-206ENST00000532536 A2ML1A8K2U0 1454 aa11.11□□□□□ -0.63
SHARPIN-206ENST00000532536 CLTCQ00610 1675 aaKnown RBP11.11□□□□□ -0.63
SHARPIN-206ENST00000532536 STRCP1A6NGW2 1772 aa11.11□□□□□ -0.63
SHARPIN-206ENST00000532536 P3H3Q8IVL6 736 aa11.1□□□□□ -0.63
SHARPIN-206ENST00000532536 KIDINS220Q9ULH0 1771 aa11.09□□□□□ -0.63
SHARPIN-206ENST00000532536 EFCAB2Q5VUJ9 269 aa11.09□□□□□ -0.63
SHARPIN-206ENST00000532536 AFAP1Q8N556 730 aa11.09□□□□□ -0.63
SHARPIN-206ENST00000532536 LRRC7Q96NW7 1537 aa11.09□□□□□ -0.63
SHARPIN-206ENST00000532536 PRXQ9BXM0 1461 aa11.08□□□□□ -0.64
SHARPIN-206ENST00000532536 DEPDC5O75140 1603 aa11.07□□□□□ -0.64
SHARPIN-206ENST00000532536 SENP3Q9H4L4 574 aaPredicted RBP11.07□□□□□ -0.64
SHARPIN-206ENST00000532536 MED14O60244 1454 aa11.06□□□□□ -0.64
SHARPIN-206ENST00000532536 ITSN2Q9NZM3 1697 aa11.04□□□□□ -0.64
SHARPIN-206ENST00000532536 XIRP1Q702N8 1843 aaKnown RBP11.04□□□□□ -0.64
SHARPIN-206ENST00000532536 IQGAP1P46940 1657 aa11.04□□□□□ -0.64
SHARPIN-206ENST00000532536 ARHGAP5Q13017 1502 aa11.04□□□□□ -0.64
SHARPIN-206ENST00000532536 FAM135BQ49AJ0 1406 aa11.02□□□□□ -0.64
SHARPIN-206ENST00000532536 CDC42BPBQ9Y5S2 1711 aa11.02□□□□□ -0.65
SHARPIN-206ENST00000532536 MYT1LQ9UL68 1186 aa11.02□□□□□ -0.65
SHARPIN-206ENST00000532536 ABCC1P33527 1531 aa11.02□□□□□ -0.65
SHARPIN-206ENST00000532536 CDK13Q14004 1512 aaKnown RBP11.02□□□□□ -0.65
SHARPIN-206ENST00000532536 PLXNC1O60486 1568 aa11.01□□□□□ -0.65
SHARPIN-206ENST00000532536 KIF14Q15058 1648 aa11.01□□□□□ -0.65
SHARPIN-206ENST00000532536 NPHP4O75161 1426 aaPredicted RBP11□□□□□ -0.65
SHARPIN-206ENST00000532536 CDK12Q9NYV4 1490 aaPredicted RBP10.99□□□□□ -0.65
SHARPIN-206ENST00000532536 ROBO1Q9Y6N7 1651 aa10.98□□□□□ -0.65
SHARPIN-206ENST00000532536 ANKLE2Q86XL3 938 aa10.97□□□□□ -0.65
SHARPIN-206ENST00000532536 PREX2Q70Z35 1606 aa10.97□□□□□ -0.65
SHARPIN-206ENST00000532536 ZC3H13Q5T200 1668 aaKnown RBP10.97□□□□□ -0.65
SHARPIN-206ENST00000532536 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.96□□□□□ -0.65
SHARPIN-206ENST00000532536 CSRNP3Q8WYN3 585 aa10.96□□□□□ -0.65
SHARPIN-206ENST00000532536 SAMD9LQ8IVG5 1584 aa10.95□□□□□ -0.66
SHARPIN-206ENST00000532536 TRIM52Q96A61 297 aa10.93□□□□□ -0.66
SHARPIN-206ENST00000532536 TNRQ92752 1358 aa10.92□□□□□ -0.66
SHARPIN-206ENST00000532536 UGGT1Q9NYU2 1555 aa10.92□□□□□ -0.66
SHARPIN-206ENST00000532536 ZNF772Q68DY9 489 aaPredicted RBP10.92□□□□□ -0.66
SHARPIN-206ENST00000532536 KDM5DQ9BY66 1539 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms