RNA–Protein interactions for RNA: ENST00000531789.1

SLC39A4-208, Transcript of solute carrier family 39 member 4, humanhuman

TSL 3

Gene SLC39A4, Length 361 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-208ENST00000531789 HECW1Q76N89 1606 aa21.46■■□□□ 1.03
SLC39A4-208ENST00000531789 PREX1Q8TCU6 1659 aa21.45■■□□□ 1.02
SLC39A4-208ENST00000531789 MAGI2Q86UL8 1455 aa21.44■■□□□ 1.02
SLC39A4-208ENST00000531789 SPATA31D1Q6ZQQ2 1576 aa21.44■■□□□ 1.02
SLC39A4-208ENST00000531789 ARHGEF12Q9NZN5 1544 aa21.42■■□□□ 1.02
SLC39A4-208ENST00000531789 RANGAP1P46060 587 aaPredicted RBP21.41■■□□□ 1.02
SLC39A4-208ENST00000531789 DMRT2Q9Y5R5 561 aa21.4■■□□□ 1.02
SLC39A4-208ENST00000531789 SCAPERQ9BY12 1400 aa21.38■■□□□ 1.01
SLC39A4-208ENST00000531789 ATP10AO60312 1499 aa21.36■■□□□ 1.01
SLC39A4-208ENST00000531789 C9orf84Q5VXU9 1444 aa21.32■■□□□ 1
SLC39A4-208ENST00000531789 UHRF1BP1Q6BDS2 1440 aa21.31■■□□□ 1
SLC39A4-208ENST00000531789 PLCH2O75038 1416 aa21.3■■□□□ 1
SLC39A4-208ENST00000531789 CSRNP3Q8WYN3 585 aa21.3■■□□□ 1
SLC39A4-208ENST00000531789 PTPRTO14522 1441 aa21.29■■□□□ 1
SLC39A4-208ENST00000531789 LTBP4Q8N2S1 1624 aa21.28■■□□□ 1
SLC39A4-208ENST00000531789 SETD1BQ9UPS6 1966 aaKnown RBP21.28■■□□□ 1
SLC39A4-208ENST00000531789 CDK13Q14004 1512 aaKnown RBP21.27■■□□□ 1
SLC39A4-208ENST00000531789 EFCAB2Q5VUJ9 269 aa21.22■□□□□ 0.99
SLC39A4-208ENST00000531789 C3P01024 1663 aa21.21■□□□□ 0.99
SLC39A4-208ENST00000531789 AFAP1Q8N556 730 aa21.21■□□□□ 0.99
SLC39A4-208ENST00000531789 MYO5CQ9NQX4 1742 aa21.19■□□□□ 0.98
SLC39A4-208ENST00000531789 IQSEC2Q5JU85 1478 aa21.19■□□□□ 0.98
SLC39A4-208ENST00000531789 EEA1Q15075 1411 aa21.18■□□□□ 0.98
SLC39A4-208ENST00000531789 DIP2CQ9Y2E4 1556 aa21.16■□□□□ 0.98
SLC39A4-208ENST00000531789 ZNF518AQ6AHZ1 1483 aa21.16■□□□□ 0.98
SLC39A4-208ENST00000531789 MYT1LQ9UL68 1186 aa21.16■□□□□ 0.98
SLC39A4-208ENST00000531789 KDM5CP41229 1560 aa21.15■□□□□ 0.98
SLC39A4-208ENST00000531789 NCOA1Q15788 1441 aa21.14■□□□□ 0.98
SLC39A4-208ENST00000531789 TRAPPC8Q9Y2L5 1435 aa21.14■□□□□ 0.98
SLC39A4-208ENST00000531789 KIF14Q15058 1648 aa21.12■□□□□ 0.97
SLC39A4-208ENST00000531789 CHIC1Q5VXU3 224 aa21.12■□□□□ 0.97
SLC39A4-208ENST00000531789 ABCA6Q8N139 1617 aa21.11■□□□□ 0.97
SLC39A4-208ENST00000531789 REREQ9P2R6 1566 aa21.11■□□□□ 0.97
SLC39A4-208ENST00000531789 ATP1B4Q9UN42 357 aaPredicted RBP21.11■□□□□ 0.97
SLC39A4-208ENST00000531789 UBAP1LF5GYI3 381 aa21.1■□□□□ 0.97
SLC39A4-208ENST00000531789 ARHGAP5Q13017 1502 aa21.09■□□□□ 0.97
SLC39A4-208ENST00000531789 ESF1Q9H501 851 aaKnown RBP21.09■□□□□ 0.97
SLC39A4-208ENST00000531789 CAMSAP1Q5T5Y3 1602 aa21.07■□□□□ 0.96
SLC39A4-208ENST00000531789 ZNF335Q9H4Z2 1342 aaPredicted RBP21.07■□□□□ 0.96
SLC39A4-208ENST00000531789 NCKAP5LQ9HCH0 1330 aa21.06■□□□□ 0.96
SLC39A4-208ENST00000531789 AGLP35573 1532 aa21.06■□□□□ 0.96
SLC39A4-208ENST00000531789 MLH3Q9UHC1 1453 aa21.06■□□□□ 0.96
SLC39A4-208ENST00000531789 CDC42BPBQ9Y5S2 1711 aa21.02■□□□□ 0.96
SLC39A4-208ENST00000531789 CDK11AQ9UQ88 783 aaPredicted RBP21.02■□□□□ 0.96
SLC39A4-208ENST00000531789 TROQ12816 1431 aaPredicted RBP21.01■□□□□ 0.95
SLC39A4-208ENST00000531789 CNTLNQ9NXG0 1405 aa21■□□□□ 0.95
SLC39A4-208ENST00000531789 KIDINS220Q9ULH0 1771 aa20.98■□□□□ 0.95
SLC39A4-208ENST00000531789 NPATQ14207 1427 aa20.96■□□□□ 0.95
SLC39A4-208ENST00000531789 FMN1Q68DA7 1419 aa20.96■□□□□ 0.95
SLC39A4-208ENST00000531789 ZMYM3Q14202 1370 aa20.96■□□□□ 0.95
SLC39A4-208ENST00000531789 LRRIQ1Q96JM4 1722 aa20.95■□□□□ 0.94
SLC39A4-208ENST00000531789 ABCC1P33527 1531 aa20.95■□□□□ 0.94
SLC39A4-208ENST00000531789 MROH2AA6NES4 1674 aa20.95■□□□□ 0.94
SLC39A4-208ENST00000531789 ITSN2Q9NZM3 1697 aa20.95■□□□□ 0.94
SLC39A4-208ENST00000531789 EHMT2Q96KQ7 1210 aa20.94■□□□□ 0.94
SLC39A4-208ENST00000531789 CLIP1P30622 1438 aa20.94■□□□□ 0.94
SLC39A4-208ENST00000531789 MED1Q15648 1581 aaPredicted RBP20.93■□□□□ 0.94
SLC39A4-208ENST00000531789 HSPA1LP34931 641 aa20.93■□□□□ 0.94
SLC39A4-208ENST00000531789 PKD2Q13563 968 aa20.92■□□□□ 0.94
SLC39A4-208ENST00000531789 PREX2Q70Z35 1606 aa20.91■□□□□ 0.94
SLC39A4-208ENST00000531789 ARHGAP35Q9NRY4 1499 aa20.91■□□□□ 0.94
SLC39A4-208ENST00000531789 TCOF1Q13428 1488 aaKnown RBP20.9■□□□□ 0.94
SLC39A4-208ENST00000531789 MYO3AQ8NEV4 1616 aa20.89■□□□□ 0.94
SLC39A4-208ENST00000531789 PLA2R1Q13018 1463 aa20.89■□□□□ 0.94
SLC39A4-208ENST00000531789 SCAF1Q9H7N4 1312 aaKnown RBP20.89■□□□□ 0.93
SLC39A4-208ENST00000531789 SUPT6HQ7KZ85 1726 aaKnown RBP20.89■□□□□ 0.93
SLC39A4-208ENST00000531789 ZNF142P52746 1687 aaPredicted RBP20.89■□□□□ 0.93
SLC39A4-208ENST00000531789 UBTFP17480 764 aaKnown RBP20.88■□□□□ 0.93
SLC39A4-208ENST00000531789 PIP4K2BP78356 416 aa20.88■□□□□ 0.93
SLC39A4-208ENST00000531789 CLTCQ00610 1675 aaKnown RBP20.88■□□□□ 0.93
SLC39A4-208ENST00000531789 CEP170BQ9Y4F5 1589 aaPredicted RBP20.86■□□□□ 0.93
SLC39A4-208ENST00000531789 PPP6R1Q9UPN7 881 aa20.86■□□□□ 0.93
SLC39A4-208ENST00000531789 SAMD9LQ8IVG5 1584 aa20.85■□□□□ 0.93
SLC39A4-208ENST00000531789 PTPRKQ15262 1439 aa20.85■□□□□ 0.93
SLC39A4-208ENST00000531789 CDC42BPAQ5VT25 1732 aa20.84■□□□□ 0.93
SLC39A4-208ENST00000531789 TOM1O60784 492 aa20.8■□□□□ 0.92
SLC39A4-208ENST00000531789 ZNF777Q9ULD5 760 aaPredicted RBP20.8■□□□□ 0.92
SLC39A4-208ENST00000531789 SPAG9O60271 1321 aaKnown RBP20.79■□□□□ 0.92
SLC39A4-208ENST00000531789 HNRNPMP52272 730 aaKnown RBP eCLIP20.79■□□□□ 0.92
SLC39A4-208ENST00000531789 GGT6Q6P531 493 aa20.78■□□□□ 0.92
SLC39A4-208ENST00000531789 SYCP2Q9BX26 1530 aa20.77■□□□□ 0.92
SLC39A4-208ENST00000531789 DNMT1P26358 1616 aaKnown RBP20.76■□□□□ 0.91
SLC39A4-208ENST00000531789 PHF23Q9BUL5 403 aaPredicted RBP20.76■□□□□ 0.91
SLC39A4-208ENST00000531789 PLXNC1O60486 1568 aa20.76■□□□□ 0.91
SLC39A4-208ENST00000531789 A2MP01023 1474 aa20.75■□□□□ 0.91
SLC39A4-208ENST00000531789 ATP7AQ04656 1500 aa20.74■□□□□ 0.91
SLC39A4-208ENST00000531789 A2ML1A8K2U0 1454 aa20.74■□□□□ 0.91
SLC39A4-208ENST00000531789 SHANK2Q9UPX8 1470 aa20.74■□□□□ 0.91
SLC39A4-208ENST00000531789 CPS1P31327 1500 aa20.73■□□□□ 0.91
SLC39A4-208ENST00000531789 NEURL4Q96JN8 1562 aa20.72■□□□□ 0.91
SLC39A4-208ENST00000531789 ALKQ9UM73 1620 aa20.72■□□□□ 0.91
SLC39A4-208ENST00000531789 POLR1AO95602 1720 aaPredicted RBP20.71■□□□□ 0.91
SLC39A4-208ENST00000531789 INO80Q9ULG1 1556 aaPredicted RBP20.71■□□□□ 0.91
SLC39A4-208ENST00000531789 CCDC18Q5T9S5 1454 aa20.7■□□□□ 0.9
SLC39A4-208ENST00000531789 GPATCH8Q9UKJ3 1502 aaKnown RBP20.7■□□□□ 0.9
SLC39A4-208ENST00000531789 CASKIN1Q8WXD9 1431 aa20.69■□□□□ 0.9
SLC39A4-208ENST00000531789 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
SLC39A4-208ENST00000531789 FBXO31Q5XUX0 539 aaPredicted RBP20.66■□□□□ 0.9
SLC39A4-208ENST00000531789 VWDEQ8N2E2 1590 aa20.66■□□□□ 0.9
SLC39A4-208ENST00000531789 KIAA1107Q9UPP5 1409 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms