RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 CHIC2Q9UKJ5 165 aa15.25■□□□□ 0.03
PUF60-213ENST00000528999 ATP10BO94823 1461 aa15.25■□□□□ 0.03
PUF60-213ENST00000528999 PTPRGP23470 1445 aa15.25■□□□□ 0.03
PUF60-213ENST00000528999 ADGRL2O95490 1459 aa15.23■□□□□ 0.03
PUF60-213ENST00000528999 TRIM52Q96A61 297 aa15.23■□□□□ 0.03
PUF60-213ENST00000528999 ARID3CA6NKF2 412 aa15.22■□□□□ 0.03
PUF60-213ENST00000528999 RSPH4AQ5TD94 716 aa15.22■□□□□ 0.03
PUF60-213ENST00000528999 CAMSAP2Q08AD1 1489 aa15.2■□□□□ 0.02
PUF60-213ENST00000528999 ABCC10Q5T3U5 1492 aa15.2■□□□□ 0.02
PUF60-213ENST00000528999 NCOA1Q15788 1441 aa15.2■□□□□ 0.02
PUF60-213ENST00000528999 ANKRD30AQ9BXX3 1397 aa15.19■□□□□ 0.02
PUF60-213ENST00000528999 ZNF644Q9H582 1327 aaPredicted RBP15.18■□□□□ 0.02
PUF60-213ENST00000528999 KIF14Q15058 1648 aa15.18■□□□□ 0.02
PUF60-213ENST00000528999 DENND4BO75064 1496 aaPredicted RBP15.18■□□□□ 0.02
PUF60-213ENST00000528999 SHANK2Q9UPX8 1470 aa15.18■□□□□ 0.02
PUF60-213ENST00000528999 SHROOM2Q13796 1616 aa15.17■□□□□ 0.02
PUF60-213ENST00000528999 ANKRD30BQ9BXX2 1392 aa15.16■□□□□ 0.02
PUF60-213ENST00000528999 ADGBQ8N7X0 1667 aa15.15■□□□□ 0.02
PUF60-213ENST00000528999 KDM6BO15054 1643 aa15.14■□□□□ 0.01
PUF60-213ENST00000528999 KDM5BQ9UGL1 1544 aa15.14■□□□□ 0.01
PUF60-213ENST00000528999 GTF3C3Q9Y5Q9 886 aa15.14■□□□□ 0.01
PUF60-213ENST00000528999 TSPY4P0CV99 314 aa15.13■□□□□ 0.01
PUF60-213ENST00000528999 TSPY10P0CW01 314 aa15.13■□□□□ 0.01
PUF60-213ENST00000528999 RPRD2Q5VT52 1461 aaKnown RBP15.13■□□□□ 0.01
PUF60-213ENST00000528999 CCER2I3L3R5 266 aa15.12■□□□□ 0.01
PUF60-213ENST00000528999 ARHGEF5Q12774 1597 aa15.11■□□□□ 0.01
PUF60-213ENST00000528999 SLC4A1APQ9BWU0 796 aaKnown RBP15.11■□□□□ 0.01
PUF60-213ENST00000528999 CROCC2H7BZ55 1655 aa15.11■□□□□ 0.01
PUF60-213ENST00000528999 CHD1O14646 1710 aa15.1■□□□□ 0.01
PUF60-213ENST00000528999 DDX10Q13206 875 aaKnown RBP15.1■□□□□ 0.01
PUF60-213ENST00000528999 YTHDC1Q96MU7 727 aaKnown RBP15.1■□□□□ 0.01
PUF60-213ENST00000528999 CDC42BPAQ5VT25 1732 aa15.09■□□□□ 0.01
PUF60-213ENST00000528999 ZNF777Q9ULD5 760 aaPredicted RBP15.08■□□□□ 0
PUF60-213ENST00000528999 ANKRD50Q9ULJ7 1429 aa15.08■□□□□ 0
PUF60-213ENST00000528999 UHRF1BP1LA0JNW5 1464 aa15.08■□□□□ 0
PUF60-213ENST00000528999 EIF4G2P78344 907 aaKnown RBP eCLIP15.07■□□□□ 0
PUF60-213ENST00000528999 L3MBTL2Q969R5 705 aa15.07■□□□□ 0
PUF60-213ENST00000528999 C9orf84Q5VXU9 1444 aa15.07■□□□□ 0
PUF60-213ENST00000528999 KIAA1107Q9UPP5 1409 aa15.07■□□□□ 0
PUF60-213ENST00000528999 PZPP20742 1482 aa15.07■□□□□ 0
PUF60-213ENST00000528999 ANP32CO43423 234 aa15.06■□□□□ 0
PUF60-213ENST00000528999 PLEKHH2Q8IVE3 1493 aa15.06■□□□□ 0
PUF60-213ENST00000528999 MBD5Q9P267 1494 aa15.06■□□□□ 0
PUF60-213ENST00000528999 ABCC2Q92887 1545 aa15.06■□□□□ 0
PUF60-213ENST00000528999 KDM5DQ9BY66 1539 aa15.04■□□□□ -0
PUF60-213ENST00000528999 CLASP1Q7Z460 1538 aa15.03■□□□□ -0
PUF60-213ENST00000528999 CCDC141Q6ZP82 1450 aa15.02■□□□□ -0
PUF60-213ENST00000528999 PREX2Q70Z35 1606 aa15.02□□□□□ -0.01
PUF60-213ENST00000528999 PELP1Q8IZL8 1130 aaKnown RBP15.01□□□□□ -0.01
PUF60-213ENST00000528999 MAST1Q9Y2H9 1570 aa15.01□□□□□ -0.01
PUF60-213ENST00000528999 TEX14Q8IWB6 1497 aa15.01□□□□□ -0.01
PUF60-213ENST00000528999 HSPA5P11021 654 aaKnown RBP15□□□□□ -0.01
PUF60-213ENST00000528999 PKD2Q13563 968 aa14.99□□□□□ -0.01
PUF60-213ENST00000528999 KIF15Q9NS87 1388 aa14.98□□□□□ -0.01
PUF60-213ENST00000528999 HNRNPMP52272 730 aaKnown RBP eCLIP14.98□□□□□ -0.01
PUF60-213ENST00000528999 NUP155O75694 1391 aa14.98□□□□□ -0.01
PUF60-213ENST00000528999 FOXD1Q16676 465 aa14.97□□□□□ -0.01
PUF60-213ENST00000528999 PLCH2O75038 1416 aa14.96□□□□□ -0.01
PUF60-213ENST00000528999 SAMD9LQ8IVG5 1584 aa14.96□□□□□ -0.01
PUF60-213ENST00000528999 CDC42BPBQ9Y5S2 1711 aa14.96□□□□□ -0.01
PUF60-213ENST00000528999 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.96□□□□□ -0.02
PUF60-213ENST00000528999 ARID4BQ4LE39 1312 aaPredicted RBP14.95□□□□□ -0.02
PUF60-213ENST00000528999 EFCAB2Q5VUJ9 269 aa14.95□□□□□ -0.02
PUF60-213ENST00000528999 UHRF1BP1Q6BDS2 1440 aa14.94□□□□□ -0.02
PUF60-213ENST00000528999 SPATA31E1Q6ZUB1 1445 aa14.94□□□□□ -0.02
PUF60-213ENST00000528999 ARAP3Q8WWN8 1544 aa14.94□□□□□ -0.02
PUF60-213ENST00000528999 NBPF8Q3BBV2 869 aa14.94□□□□□ -0.02
PUF60-213ENST00000528999 HIRIP3Q9BW71 556 aaPredicted RBP14.94□□□□□ -0.02
PUF60-213ENST00000528999 ARHGAP5Q13017 1502 aa14.93□□□□□ -0.02
PUF60-213ENST00000528999 ARHGEF12Q9NZN5 1544 aa14.93□□□□□ -0.02
PUF60-213ENST00000528999 WASHC2AQ641Q2 1341 aa14.92□□□□□ -0.02
PUF60-213ENST00000528999 ERCC6L2Q5T890 1561 aa14.91□□□□□ -0.02
PUF60-213ENST00000528999 MYO5CQ9NQX4 1742 aa14.91□□□□□ -0.02
PUF60-213ENST00000528999 PLXNC1O60486 1568 aa14.9□□□□□ -0.02
PUF60-213ENST00000528999 CCDC7Q96M83 1385 aa14.9□□□□□ -0.02
PUF60-213ENST00000528999 TTC37Q6PGP7 1564 aa14.89□□□□□ -0.03
PUF60-213ENST00000528999 DUOX2Q9NRD8 1548 aa14.88□□□□□ -0.03
PUF60-213ENST00000528999 RTEL1-TNFRSF6BF6WH68 1400 aa14.88□□□□□ -0.03
PUF60-213ENST00000528999 CNTLNQ9NXG0 1405 aa14.88□□□□□ -0.03
PUF60-213ENST00000528999 ZCCHC11Q5TAX3 1644 aaKnown RBP14.88□□□□□ -0.03
PUF60-213ENST00000528999 ERBINQ96RT1 1412 aa14.87□□□□□ -0.03
PUF60-213ENST00000528999 SYCP2Q9BX26 1530 aa14.87□□□□□ -0.03
PUF60-213ENST00000528999 UNC13BO14795 1591 aa14.86□□□□□ -0.03
PUF60-213ENST00000528999 FAM135AQ9P2D6 1515 aa14.85□□□□□ -0.03
PUF60-213ENST00000528999 ATP10AO60312 1499 aa14.84□□□□□ -0.03
PUF60-213ENST00000528999 KCNH8Q96L42 1107 aa14.84□□□□□ -0.03
PUF60-213ENST00000528999 RALGAPBQ86X10 1494 aa14.83□□□□□ -0.03
PUF60-213ENST00000528999 STAC3Q96MF2 364 aa14.82□□□□□ -0.04
PUF60-213ENST00000528999 ROCK2O75116 1388 aaKnown RBP14.82□□□□□ -0.04
PUF60-213ENST00000528999 MAGI2Q86UL8 1455 aa14.82□□□□□ -0.04
PUF60-213ENST00000528999 POLR1AO95602 1720 aaPredicted RBP14.81□□□□□ -0.04
PUF60-213ENST00000528999 ABCC1P33527 1531 aa14.81□□□□□ -0.04
PUF60-213ENST00000528999 C11orf95C9JLR9 678 aaPredicted RBP14.8□□□□□ -0.04
PUF60-213ENST00000528999 KIF7Q2M1P5 1343 aa14.8□□□□□ -0.04
PUF60-213ENST00000528999 IQGAP3Q86VI3 1631 aa14.8□□□□□ -0.04
PUF60-213ENST00000528999 CCDC144AA2RUR9 1427 aa14.79□□□□□ -0.04
PUF60-213ENST00000528999 USP47Q96K76 1375 aa14.79□□□□□ -0.04
PUF60-213ENST00000528999 WDR7Q9Y4E6 1490 aa14.79□□□□□ -0.04
PUF60-213ENST00000528999 PRKRIP1Q9H875 184 aaPredicted RBP14.78□□□□□ -0.04
PUF60-213ENST00000528999 SPAG9O60271 1321 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms