RNA–Protein interactions for RNA: ENST00000526995.5

TRAF6-202, Transcript of TNF receptor associated factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF6, Length 4,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6-202ENST00000526995 CFTRP13569 1480 aa17.52■□□□□ 0.39
TRAF6-202ENST00000526995 KTN1Q86UP2 1357 aaKnown RBP17.51■□□□□ 0.39
TRAF6-202ENST00000526995 PNNQ9H307 717 aaKnown RBP17.51■□□□□ 0.39
TRAF6-202ENST00000526995 U2SURPO15042 1029 aaKnown RBP17.51■□□□□ 0.39
TRAF6-202ENST00000526995 MORC1Q86VD1 984 aa17.49■□□□□ 0.39
TRAF6-202ENST00000526995 DDRGK1Q96HY6 314 aa17.48■□□□□ 0.39
TRAF6-202ENST00000526995 RALBP1Q15311 655 aa17.48■□□□□ 0.39
TRAF6-202ENST00000526995 KIF21BO75037 1637 aa17.46■□□□□ 0.39
TRAF6-202ENST00000526995 LAS1LQ9Y4W2 734 aaKnown RBP17.46■□□□□ 0.39
TRAF6-202ENST00000526995 SAFB2Q14151 953 aaKnown RBP eCLIP17.46■□□□□ 0.39
TRAF6-202ENST00000526995 MS4A1P11836 297 aa17.46■□□□□ 0.38
TRAF6-202ENST00000526995 NBR1Q14596 966 aa17.46■□□□□ 0.38
TRAF6-202ENST00000526995 BECN1Q14457 450 aa17.45■□□□□ 0.38
TRAF6-202ENST00000526995 FRAT1Q92837 279 aaPredicted RBP17.44■□□□□ 0.38
TRAF6-202ENST00000526995 HAP1P54257 671 aaPredicted RBP17.44■□□□□ 0.38
TRAF6-202ENST00000526995 ERICH3Q5RHP9 1530 aa17.43■□□□□ 0.38
TRAF6-202ENST00000526995 STK26Q9P289 416 aa17.43■□□□□ 0.38
TRAF6-202ENST00000526995 CYB5RLQ6IPT4 315 aa17.43■□□□□ 0.38
TRAF6-202ENST00000526995 EIF3AQ14152 1382 aaKnown RBP17.43■□□□□ 0.38
TRAF6-202ENST00000526995 CHMP4BQ9H444 224 aaKnown RBP17.43■□□□□ 0.38
TRAF6-202ENST00000526995 SYNJ1O43426 1573 aa17.42■□□□□ 0.38
TRAF6-202ENST00000526995 A0A0G2JS52 829 aa17.42■□□□□ 0.38
TRAF6-202ENST00000526995 LMOD2Q6P5Q4 547 aa17.42■□□□□ 0.38
TRAF6-202ENST00000526995 HMGXB3Q12766 1538 aa17.42■□□□□ 0.38
TRAF6-202ENST00000526995 HDGFL2Q7Z4V5 671 aaPredicted RBP17.41■□□□□ 0.38
TRAF6-202ENST00000526995 AQRO60306 1485 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRAF6-202ENST00000526995 FGD6Q6ZV73 1430 aa17.4■□□□□ 0.38
TRAF6-202ENST00000526995 MYOM3Q5VTT5 1437 aa17.4■□□□□ 0.38
TRAF6-202ENST00000526995 WASHC2CQ9Y4E1 1318 aa17.4■□□□□ 0.38
TRAF6-202ENST00000526995 DNAJC5BQ9UF47 199 aa17.4■□□□□ 0.38
TRAF6-202ENST00000526995 B4GALNT3Q6L9W6 998 aa17.39■□□□□ 0.37
TRAF6-202ENST00000526995 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
TRAF6-202ENST00000526995 LRRC9Q6ZRR7 1453 aa17.37■□□□□ 0.37
TRAF6-202ENST00000526995 EIF5BO60841 1220 aaKnown RBP17.37■□□□□ 0.37
TRAF6-202ENST00000526995 CASKIN1Q8WXD9 1431 aa17.37■□□□□ 0.37
TRAF6-202ENST00000526995 CUX1P39880 1505 aa17.37■□□□□ 0.37
TRAF6-202ENST00000526995 GRIN2BQ13224 1484 aa17.36■□□□□ 0.37
TRAF6-202ENST00000526995 PHLDB1Q86UU1 1377 aa17.35■□□□□ 0.37
TRAF6-202ENST00000526995 RGS3P49796 1198 aa17.35■□□□□ 0.37
TRAF6-202ENST00000526995 ERICH6BQ5W0A0 696 aa17.35■□□□□ 0.37
TRAF6-202ENST00000526995 NLRP13Q86W25 1043 aa17.34■□□□□ 0.37
TRAF6-202ENST00000526995 PRXQ9BXM0 1461 aa17.34■□□□□ 0.37
TRAF6-202ENST00000526995 OSCARQ8IYS5 282 aa17.34■□□□□ 0.37
TRAF6-202ENST00000526995 TOP2BQ02880 1626 aa17.33■□□□□ 0.36
TRAF6-202ENST00000526995 ARAP1Q96P48 1450 aa17.32■□□□□ 0.36
TRAF6-202ENST00000526995 ST20-MTHFSA0A0A6YYL1 179 aa17.32■□□□□ 0.36
TRAF6-202ENST00000526995 CASC1Q6TDU7 716 aa17.31■□□□□ 0.36
TRAF6-202ENST00000526995 NESP48681 1621 aa17.3■□□□□ 0.36
TRAF6-202ENST00000526995 SOX12O15370 315 aa17.3■□□□□ 0.36
TRAF6-202ENST00000526995 U2AF1L5P0DN76 240 aaPredicted RBP17.3■□□□□ 0.36
TRAF6-202ENST00000526995 U2AF1Q01081 240 aaKnown RBP eCLIP17.3■□□□□ 0.36
TRAF6-202ENST00000526995 RCAN3Q9UKA8 241 aa17.29■□□□□ 0.36
TRAF6-202ENST00000526995 FYCO1Q9BQS8 1478 aa17.29■□□□□ 0.36
TRAF6-202ENST00000526995 UACAQ9BZF9 1416 aa17.29■□□□□ 0.36
TRAF6-202ENST00000526995 TERF2IPQ9NYB0 399 aa17.28■□□□□ 0.36
TRAF6-202ENST00000526995 CC2D2AQ9P2K1 1620 aa17.28■□□□□ 0.36
TRAF6-202ENST00000526995 TOPBP1Q92547 1522 aa17.28■□□□□ 0.36
TRAF6-202ENST00000526995 ZNF644Q9H582 1327 aaPredicted RBP17.27■□□□□ 0.36
TRAF6-202ENST00000526995 NCOA2Q15596 1464 aa17.27■□□□□ 0.36
TRAF6-202ENST00000526995 ANP32EQ9BTT0 268 aa17.26■□□□□ 0.35
TRAF6-202ENST00000526995 KIF15Q9NS87 1388 aa17.26■□□□□ 0.35
TRAF6-202ENST00000526995 POLA1P09884 1462 aaPredicted RBP17.25■□□□□ 0.35
TRAF6-202ENST00000526995 MRC2Q9UBG0 1479 aa17.25■□□□□ 0.35
TRAF6-202ENST00000526995 GOLGA6L22H0YM25 854 aa17.25■□□□□ 0.35
TRAF6-202ENST00000526995 USP47Q96K76 1375 aa17.24■□□□□ 0.35
TRAF6-202ENST00000526995 CALD1Q05682 793 aaKnown RBP17.24■□□□□ 0.35
TRAF6-202ENST00000526995 PDE3BQ13370 1112 aa17.24■□□□□ 0.35
TRAF6-202ENST00000526995 EFCAB5A4FU69 1503 aa17.24■□□□□ 0.35
TRAF6-202ENST00000526995 ARXQ96QS3 562 aa17.24■□□□□ 0.35
TRAF6-202ENST00000526995 TRAK1Q9UPV9 953 aa17.23■□□□□ 0.35
TRAF6-202ENST00000526995 RTF1Q92541 710 aaKnown RBP17.23■□□□□ 0.35
TRAF6-202ENST00000526995 IPO8O15397 1037 aaKnown RBP17.22■□□□□ 0.35
TRAF6-202ENST00000526995 RRBP1Q9P2E9 1410 aaKnown RBP17.22■□□□□ 0.35
TRAF6-202ENST00000526995 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
TRAF6-202ENST00000526995 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
TRAF6-202ENST00000526995 VGFO15240 615 aaPredicted RBP17.22■□□□□ 0.35
TRAF6-202ENST00000526995 NUTM2DQ5VT03 806 aaPredicted RBP17.22■□□□□ 0.35
TRAF6-202ENST00000526995 EID1Q9Y6B2 187 aa17.22■□□□□ 0.35
TRAF6-202ENST00000526995 MYBBP1AQ9BQG0 1328 aaKnown RBP17.21■□□□□ 0.35
TRAF6-202ENST00000526995 BICRAQ9NZM4 1560 aa17.21■□□□□ 0.35
TRAF6-202ENST00000526995 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
TRAF6-202ENST00000526995 PRDM2Q13029 1718 aa17.2■□□□□ 0.34
TRAF6-202ENST00000526995 ANKRD50Q9ULJ7 1429 aa17.2■□□□□ 0.34
TRAF6-202ENST00000526995 PANK3Q9H999 370 aa17.2■□□□□ 0.34
TRAF6-202ENST00000526995 NCLP19338 710 aaKnown RBP17.19■□□□□ 0.34
TRAF6-202ENST00000526995 STAC3Q96MF2 364 aa17.17■□□□□ 0.34
TRAF6-202ENST00000526995 DNMBPQ6XZF7 1577 aa17.17■□□□□ 0.34
TRAF6-202ENST00000526995 NOP58Q9Y2X3 529 aaKnown RBP17.16■□□□□ 0.34
TRAF6-202ENST00000526995 OS9Q13438 667 aaPredicted RBP17.16■□□□□ 0.34
TRAF6-202ENST00000526995 PAK3O75914 559 aaPredicted RBP17.16■□□□□ 0.34
TRAF6-202ENST00000526995 SYNJ2O15056 1496 aa17.15■□□□□ 0.34
TRAF6-202ENST00000526995 PRG4Q92954 1404 aaPredicted RBP17.13■□□□□ 0.33
TRAF6-202ENST00000526995 EVC2Q86UK5 1308 aa17.12■□□□□ 0.33
TRAF6-202ENST00000526995 CCDC146Q8IYE0 955 aa17.11■□□□□ 0.33
TRAF6-202ENST00000526995 MIA2Q96PC5 1412 aa17.11■□□□□ 0.33
TRAF6-202ENST00000526995 RWDD1Q9H446 243 aaPredicted RBP17.11■□□□□ 0.33
TRAF6-202ENST00000526995 RBM19Q9Y4C8 960 aaKnown RBP17.11■□□□□ 0.33
TRAF6-202ENST00000526995 NGDNQ8NEJ9 315 aaKnown RBP17.1■□□□□ 0.33
TRAF6-202ENST00000526995 CHMP4AQ9BY43 222 aa17.1■□□□□ 0.33
TRAF6-202ENST00000526995 EHBP1L1Q8N3D4 1523 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms