RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 LTBP4Q8N2S1 1624 aa23.58■■□□□ 1.36
SSRP1-203ENST00000526696 MAGI2Q86UL8 1455 aa23.56■■□□□ 1.36
SSRP1-203ENST00000526696 CFAP74Q9C0B2 1584 aa23.56■■□□□ 1.36
SSRP1-203ENST00000526696 SETD1BQ9UPS6 1966 aaKnown RBP23.55■■□□□ 1.36
SSRP1-203ENST00000526696 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.54■■□□□ 1.364e-7■■□□□ 12.3
SSRP1-203ENST00000526696 SAMD9Q5K651 1589 aa23.54■■□□□ 1.36
SSRP1-203ENST00000526696 FAM9AQ8IZU1 332 aaPredicted RBP23.54■■□□□ 1.36
SSRP1-203ENST00000526696 PTPRTO14522 1441 aa23.53■■□□□ 1.36
SSRP1-203ENST00000526696 UHRF1BP1Q6BDS2 1440 aa23.5■■□□□ 1.35
SSRP1-203ENST00000526696 IQSEC2Q5JU85 1478 aa23.48■■□□□ 1.35
SSRP1-203ENST00000526696 ATP10AO60312 1499 aa23.47■■□□□ 1.35
SSRP1-203ENST00000526696 C9orf84Q5VXU9 1444 aa23.45■■□□□ 1.34
SSRP1-203ENST00000526696 PLEKHD1A6NEE1 506 aa23.45■■□□□ 1.34
SSRP1-203ENST00000526696 SCAPERQ9BY12 1400 aa23.44■■□□□ 1.34
SSRP1-203ENST00000526696 C3P01024 1663 aa23.36■■□□□ 1.33
SSRP1-203ENST00000526696 PLCH2O75038 1416 aa23.35■■□□□ 1.33
SSRP1-203ENST00000526696 NCOA1Q15788 1441 aa23.35■■□□□ 1.33
SSRP1-203ENST00000526696 UBAP1LF5GYI3 381 aa23.3■■□□□ 1.32
SSRP1-203ENST00000526696 ZNF335Q9H4Z2 1342 aaPredicted RBP23.28■■□□□ 1.32
SSRP1-203ENST00000526696 TRAPPC8Q9Y2L5 1435 aa23.27■■□□□ 1.32
SSRP1-203ENST00000526696 CDK13Q14004 1512 aaKnown RBP23.26■■□□□ 1.31
SSRP1-203ENST00000526696 DIP2CQ9Y2E4 1556 aa23.26■■□□□ 1.31
SSRP1-203ENST00000526696 RANGAP1P46060 587 aaPredicted RBP23.25■■□□□ 1.31
SSRP1-203ENST00000526696 KDM5CP41229 1560 aa23.25■■□□□ 1.31
SSRP1-203ENST00000526696 MED1Q15648 1581 aaPredicted RBP23.25■■□□□ 1.31
SSRP1-203ENST00000526696 CAMSAP1Q5T5Y3 1602 aa23.23■■□□□ 1.31
SSRP1-203ENST00000526696 AFAP1Q8N556 730 aa23.23■■□□□ 1.31
SSRP1-203ENST00000526696 REREQ9P2R6 1566 aa23.23■■□□□ 1.31
SSRP1-203ENST00000526696 ZNF518AQ6AHZ1 1483 aa23.22■■□□□ 1.31
SSRP1-203ENST00000526696 EFCAB2Q5VUJ9 269 aa23.21■■□□□ 1.31
SSRP1-203ENST00000526696 MYO5CQ9NQX4 1742 aa23.21■■□□□ 1.31
SSRP1-203ENST00000526696 ABCA6Q8N139 1617 aa23.2■■□□□ 1.3
SSRP1-203ENST00000526696 NCKAP5LQ9HCH0 1330 aa23.19■■□□□ 1.3
SSRP1-203ENST00000526696 HSPA1LP34931 641 aa23.17■■□□□ 1.3
SSRP1-203ENST00000526696 AGLP35573 1532 aa23.15■■□□□ 1.3
SSRP1-203ENST00000526696 KIF14Q15058 1648 aa23.13■■□□□ 1.29
SSRP1-203ENST00000526696 CSRNP3Q8WYN3 585 aa23.12■■□□□ 1.29
SSRP1-203ENST00000526696 MYT1LQ9UL68 1186 aa23.11■■□□□ 1.29
SSRP1-203ENST00000526696 MLH3Q9UHC1 1453 aa23.11■■□□□ 1.29
SSRP1-203ENST00000526696 ESF1Q9H501 851 aaKnown RBP23.1■■□□□ 1.29
SSRP1-203ENST00000526696 NPATQ14207 1427 aa23.08■■□□□ 1.29
SSRP1-203ENST00000526696 CNTLNQ9NXG0 1405 aa23.08■■□□□ 1.29
SSRP1-203ENST00000526696 ARHGAP5Q13017 1502 aa23.08■■□□□ 1.29
SSRP1-203ENST00000526696 TCOF1Q13428 1488 aaKnown RBP23.06■■□□□ 1.28
SSRP1-203ENST00000526696 PLA2R1Q13018 1463 aa23.05■■□□□ 1.28
SSRP1-203ENST00000526696 MROH2AA6NES4 1674 aa23.04■■□□□ 1.28
SSRP1-203ENST00000526696 PIP4K2BP78356 416 aa23.04■■□□□ 1.28
SSRP1-203ENST00000526696 ZNF142P52746 1687 aaPredicted RBP23.03■■□□□ 1.28
SSRP1-203ENST00000526696 PKD2Q13563 968 aa23.03■■□□□ 1.28
SSRP1-203ENST00000526696 KIDINS220Q9ULH0 1771 aa23.03■■□□□ 1.28
SSRP1-203ENST00000526696 SCAF1Q9H7N4 1312 aaKnown RBP23.03■■□□□ 1.28
SSRP1-203ENST00000526696 ZMYM3Q14202 1370 aa23.02■■□□□ 1.28
SSRP1-203ENST00000526696 CDC42BPBQ9Y5S2 1711 aa23.02■■□□□ 1.28
SSRP1-203ENST00000526696 MYO3AQ8NEV4 1616 aa23■■□□□ 1.27
SSRP1-203ENST00000526696 SUPT6HQ7KZ85 1726 aaKnown RBP22.99■■□□□ 1.27
SSRP1-203ENST00000526696 CEP170BQ9Y4F5 1589 aaPredicted RBP22.97■■□□□ 1.27
SSRP1-203ENST00000526696 PPP6R1Q9UPN7 881 aa22.97■■□□□ 1.27
SSRP1-203ENST00000526696 ABCC1P33527 1531 aa22.97■■□□□ 1.27
SSRP1-203ENST00000526696 ITSN2Q9NZM3 1697 aa22.97■■□□□ 1.27
SSRP1-203ENST00000526696 PHF23Q9BUL5 403 aaPredicted RBP22.96■■□□□ 1.27
SSRP1-203ENST00000526696 TROQ12816 1431 aaPredicted RBP22.96■■□□□ 1.27
SSRP1-203ENST00000526696 ALKQ9UM73 1620 aa22.95■■□□□ 1.26
SSRP1-203ENST00000526696 ATP1B4Q9UN42 357 aaPredicted RBP22.94■■□□□ 1.26
SSRP1-203ENST00000526696 TOM1O60784 492 aa22.93■■□□□ 1.26
SSRP1-203ENST00000526696 CLTCQ00610 1675 aaKnown RBP22.93■■□□□ 1.26
SSRP1-203ENST00000526696 PTPRKQ15262 1439 aa22.92■■□□□ 1.26
SSRP1-203ENST00000526696 CDK11AQ9UQ88 783 aaPredicted RBP22.91■■□□□ 1.26
SSRP1-203ENST00000526696 PREX2Q70Z35 1606 aa22.9■■□□□ 1.26
SSRP1-203ENST00000526696 LRRIQ1Q96JM4 1722 aa22.89■■□□□ 1.26
SSRP1-203ENST00000526696 CPS1P31327 1500 aa22.88■■□□□ 1.25
SSRP1-203ENST00000526696 SHANK2Q9UPX8 1470 aa22.86■■□□□ 1.25
SSRP1-203ENST00000526696 SAMD9LQ8IVG5 1584 aa22.86■■□□□ 1.25
SSRP1-203ENST00000526696 NEURL4Q96JN8 1562 aa22.86■■□□□ 1.25
SSRP1-203ENST00000526696 RGS17Q9UGC6 210 aaPredicted RBP22.86■■□□□ 1.25
SSRP1-203ENST00000526696 DNMT1P26358 1616 aaKnown RBP22.85■■□□□ 1.25
SSRP1-203ENST00000526696 CLIP1P30622 1438 aa22.84■■□□□ 1.25
SSRP1-203ENST00000526696 FMN1Q68DA7 1419 aa22.83■■□□□ 1.25
SSRP1-203ENST00000526696 POLR1AO95602 1720 aaPredicted RBP22.82■■□□□ 1.24
SSRP1-203ENST00000526696 A2ML1A8K2U0 1454 aa22.81■■□□□ 1.24
SSRP1-203ENST00000526696 PLXNC1O60486 1568 aa22.8■■□□□ 1.24
SSRP1-203ENST00000526696 VWDEQ8N2E2 1590 aa22.8■■□□□ 1.24
SSRP1-203ENST00000526696 CDC42BPAQ5VT25 1732 aa22.79■■□□□ 1.24
SSRP1-203ENST00000526696 ARHGAP35Q9NRY4 1499 aa22.79■■□□□ 1.24
SSRP1-203ENST00000526696 SENP3Q9H4L4 574 aaPredicted RBP22.78■■□□□ 1.24
SSRP1-203ENST00000526696 EEA1Q15075 1411 aa22.77■■□□□ 1.24
SSRP1-203ENST00000526696 GGT6Q6P531 493 aa22.74■■□□□ 1.23
SSRP1-203ENST00000526696 SPAG9O60271 1321 aaKnown RBP22.74■■□□□ 1.23
SSRP1-203ENST00000526696 SYCP2Q9BX26 1530 aa22.73■■□□□ 1.23
SSRP1-203ENST00000526696 ATP7AQ04656 1500 aa22.72■■□□□ 1.23
SSRP1-203ENST00000526696 A2MP01023 1474 aa22.72■■□□□ 1.23
SSRP1-203ENST00000526696 STRCP1A6NGW2 1772 aa22.71■■□□□ 1.23
SSRP1-203ENST00000526696 HNRNPMP52272 730 aaKnown RBP eCLIP22.7■■□□□ 1.22
SSRP1-203ENST00000526696 INO80Q9ULG1 1556 aaPredicted RBP22.7■■□□□ 1.22
SSRP1-203ENST00000526696 ZNF777Q9ULD5 760 aaPredicted RBP22.68■■□□□ 1.22
SSRP1-203ENST00000526696 FBXO31Q5XUX0 539 aaPredicted RBP22.66■■□□□ 1.22
SSRP1-203ENST00000526696 POTEAQ6S8J7 498 aa22.66■■□□□ 1.22
SSRP1-203ENST00000526696 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.65■■□□□ 1.22
SSRP1-203ENST00000526696 LRRC7Q96NW7 1537 aa22.65■■□□□ 1.22
SSRP1-203ENST00000526696 TNRQ92752 1358 aa22.63■■□□□ 1.21
SSRP1-203ENST00000526696 MED14O60244 1454 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms