RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 SCAPERQ9BY12 1400 aa33.19■■■□□ 2.9
AMBRA1-205ENST00000526606 CEBPAP49715 358 aaPredicted RBP33.16■■■□□ 2.9
AMBRA1-205ENST00000526606 ARHGEF12Q9NZN5 1544 aa33.16■■■□□ 2.9
AMBRA1-205ENST00000526606 PLCH2O75038 1416 aa33.15■■■□□ 2.9
AMBRA1-205ENST00000526606 ATP10AO60312 1499 aa33.12■■■□□ 2.89
AMBRA1-205ENST00000526606 CDK13Q14004 1512 aaKnown RBP33.11■■■□□ 2.89
AMBRA1-205ENST00000526606 STRCQ7RTU9 1775 aa33.09■■■□□ 2.89
AMBRA1-205ENST00000526606 PREX1Q8TCU6 1659 aa33.09■■■□□ 2.89
AMBRA1-205ENST00000526606 DISP3Q9P2K9 1392 aa33.08■■■□□ 2.89
AMBRA1-205ENST00000526606 C9orf84Q5VXU9 1444 aa33.05■■■□□ 2.88
AMBRA1-205ENST00000526606 SOCS7O14512 581 aa33.04■■■□□ 2.88
AMBRA1-205ENST00000526606 EFCAB2Q5VUJ9 269 aa33■■■□□ 2.87
AMBRA1-205ENST00000526606 DMRT2Q9Y5R5 561 aa33■■■□□ 2.87
AMBRA1-205ENST00000526606 EEA1Q15075 1411 aa32.96■■■□□ 2.87
AMBRA1-205ENST00000526606 SETD1BQ9UPS6 1966 aaKnown RBP32.94■■■□□ 2.86
AMBRA1-205ENST00000526606 AFAP1Q8N556 730 aa32.94■■■□□ 2.86
AMBRA1-205ENST00000526606 UHRF1BP1Q6BDS2 1440 aa32.92■■■□□ 2.86
AMBRA1-205ENST00000526606 MYO5CQ9NQX4 1742 aa32.91■■■□□ 2.86
AMBRA1-205ENST00000526606 KDM5CP41229 1560 aa32.87■■■□□ 2.85
AMBRA1-205ENST00000526606 ZNF518AQ6AHZ1 1483 aa32.87■■■□□ 2.85
AMBRA1-205ENST00000526606 KIF14Q15058 1648 aa32.87■■■□□ 2.85
AMBRA1-205ENST00000526606 PTPRTO14522 1441 aa32.86■■■□□ 2.85
AMBRA1-205ENST00000526606 ATP1B4Q9UN42 357 aaPredicted RBP32.84■■■□□ 2.85
AMBRA1-205ENST00000526606 DIP2CQ9Y2E4 1556 aa32.83■■■□□ 2.85
AMBRA1-205ENST00000526606 LTBP4Q8N2S1 1624 aa32.81■■■□□ 2.84
AMBRA1-205ENST00000526606 C3P01024 1663 aa32.8■■■□□ 2.84
AMBRA1-205ENST00000526606 REREQ9P2R6 1566 aa32.79■■■□□ 2.84
AMBRA1-205ENST00000526606 ARHGAP5Q13017 1502 aa32.77■■■□□ 2.84
AMBRA1-205ENST00000526606 CDK11AQ9UQ88 783 aaPredicted RBP32.77■■■□□ 2.84
AMBRA1-205ENST00000526606 SPATA31D1Q6ZQQ2 1576 aa32.77■■■□□ 2.84
AMBRA1-205ENST00000526606 ABCA6Q8N139 1617 aa32.75■■■□□ 2.83
AMBRA1-205ENST00000526606 TROQ12816 1431 aaPredicted RBP32.75■■■□□ 2.83
AMBRA1-205ENST00000526606 FMN1Q68DA7 1419 aa32.75■■■□□ 2.83
AMBRA1-205ENST00000526606 MLH3Q9UHC1 1453 aa32.74■■■□□ 2.83
AMBRA1-205ENST00000526606 MYT1LQ9UL68 1186 aa32.74■■■□□ 2.83
AMBRA1-205ENST00000526606 TRAPPC8Q9Y2L5 1435 aa32.72■■■□□ 2.83
AMBRA1-205ENST00000526606 ARHGAP35Q9NRY4 1499 aa32.72■■■□□ 2.83
AMBRA1-205ENST00000526606 AGLP35573 1532 aa32.71■■■□□ 2.83
AMBRA1-205ENST00000526606 CDC42BPBQ9Y5S2 1711 aa32.7■■■□□ 2.83
AMBRA1-205ENST00000526606 NCOA1Q15788 1441 aa32.68■■■□□ 2.82
AMBRA1-205ENST00000526606 LRRIQ1Q96JM4 1722 aa32.66■■■□□ 2.82
AMBRA1-205ENST00000526606 EHMT2Q96KQ7 1210 aa32.66■■■□□ 2.82
AMBRA1-205ENST00000526606 IQSEC2Q5JU85 1478 aa32.66■■■□□ 2.82
AMBRA1-205ENST00000526606 UBTFP17480 764 aaKnown RBP32.62■■■□□ 2.81
AMBRA1-205ENST00000526606 ESF1Q9H501 851 aaKnown RBP32.62■■■□□ 2.81
AMBRA1-205ENST00000526606 CLIP1P30622 1438 aa32.61■■■□□ 2.81
AMBRA1-205ENST00000526606 ABCC1P33527 1531 aa32.59■■■□□ 2.81
AMBRA1-205ENST00000526606 KIDINS220Q9ULH0 1771 aa32.59■■■□□ 2.81
AMBRA1-205ENST00000526606 CNTLNQ9NXG0 1405 aa32.56■■■□□ 2.8
AMBRA1-205ENST00000526606 ITSN2Q9NZM3 1697 aa32.55■■■□□ 2.8
AMBRA1-205ENST00000526606 CAMSAP1Q5T5Y3 1602 aa32.55■■■□□ 2.8
AMBRA1-205ENST00000526606 PREX2Q70Z35 1606 aa32.55■■■□□ 2.8
AMBRA1-205ENST00000526606 NCKAP5LQ9HCH0 1330 aa32.52■■■□□ 2.8
AMBRA1-205ENST00000526606 NPATQ14207 1427 aa32.51■■■□□ 2.79
AMBRA1-205ENST00000526606 ZNF335Q9H4Z2 1342 aaPredicted RBP32.51■■■□□ 2.79
AMBRA1-205ENST00000526606 ZMYM3Q14202 1370 aa32.5■■■□□ 2.79
AMBRA1-205ENST00000526606 MROH2AA6NES4 1674 aa32.46■■■□□ 2.79
AMBRA1-205ENST00000526606 UBAP1LF5GYI3 381 aa32.44■■■□□ 2.78
AMBRA1-205ENST00000526606 SAMD9LQ8IVG5 1584 aa32.43■■■□□ 2.78
AMBRA1-205ENST00000526606 CDC42BPAQ5VT25 1732 aa32.43■■■□□ 2.78
AMBRA1-205ENST00000526606 CASKIN1Q8WXD9 1431 aa32.36■■■□□ 2.77
AMBRA1-205ENST00000526606 SUPT6HQ7KZ85 1726 aaKnown RBP32.35■■■□□ 2.77
AMBRA1-205ENST00000526606 HNRNPMP52272 730 aaKnown RBP eCLIP32.35■■■□□ 2.771e-7■■■■□ 25.8
AMBRA1-205ENST00000526606 PKD2Q13563 968 aa32.35■■■□□ 2.77
AMBRA1-205ENST00000526606 ZNF777Q9ULD5 760 aaPredicted RBP32.35■■■□□ 2.77
AMBRA1-205ENST00000526606 TCOF1Q13428 1488 aaKnown RBP32.35■■■□□ 2.77
AMBRA1-205ENST00000526606 SPAG9O60271 1321 aaKnown RBP32.34■■■□□ 2.77
AMBRA1-205ENST00000526606 PLA2R1Q13018 1463 aa32.34■■■□□ 2.77
AMBRA1-205ENST00000526606 CCDC18Q5T9S5 1454 aa32.34■■■□□ 2.77
AMBRA1-205ENST00000526606 PTPRKQ15262 1439 aa32.34■■■□□ 2.77
AMBRA1-205ENST00000526606 CLTCQ00610 1675 aaKnown RBP32.33■■■□□ 2.77
AMBRA1-205ENST00000526606 ZNF142P52746 1687 aaPredicted RBP32.32■■■□□ 2.76
AMBRA1-205ENST00000526606 MYO3AQ8NEV4 1616 aa32.31■■■□□ 2.76
AMBRA1-205ENST00000526606 SYCP2Q9BX26 1530 aa32.31■■■□□ 2.76
AMBRA1-205ENST00000526606 GPATCH8Q9UKJ3 1502 aaKnown RBP32.3■■■□□ 2.76
AMBRA1-205ENST00000526606 CEP170BQ9Y4F5 1589 aaPredicted RBP32.28■■■□□ 2.76
AMBRA1-205ENST00000526606 PLXNC1O60486 1568 aa32.28■■■□□ 2.76
AMBRA1-205ENST00000526606 ATP7AQ04656 1500 aa32.25■■■□□ 2.75
AMBRA1-205ENST00000526606 GGT6Q6P531 493 aa32.24■■■□□ 2.75
AMBRA1-205ENST00000526606 A2MP01023 1474 aa32.23■■■□□ 2.75
AMBRA1-205ENST00000526606 PPP6R1Q9UPN7 881 aa32.22■■■□□ 2.75
AMBRA1-205ENST00000526606 INO80Q9ULG1 1556 aaPredicted RBP32.21■■■□□ 2.75
AMBRA1-205ENST00000526606 KIAA1107Q9UPP5 1409 aa32.21■■■□□ 2.75
AMBRA1-205ENST00000526606 HSPA1LP34931 641 aa32.21■■■□□ 2.75
AMBRA1-205ENST00000526606 CFDP1Q9UEE9 299 aaPredicted RBP32.14■■■□□ 2.74
AMBRA1-205ENST00000526606 FYCO1Q9BQS8 1478 aa32.14■■■□□ 2.74
AMBRA1-205ENST00000526606 DNMT1P26358 1616 aaKnown RBP32.14■■■□□ 2.74
AMBRA1-205ENST00000526606 A2ML1A8K2U0 1454 aa32.13■■■□□ 2.73
AMBRA1-205ENST00000526606 MED1Q15648 1581 aaPredicted RBP32.12■■■□□ 2.73
AMBRA1-205ENST00000526606 PIP4K2BP78356 416 aa32.12■■■□□ 2.73
AMBRA1-205ENST00000526606 PLEKHH2Q8IVE3 1493 aa32.1■■■□□ 2.73
AMBRA1-205ENST00000526606 SCAF1Q9H7N4 1312 aaKnown RBP32.08■■■□□ 2.73
AMBRA1-205ENST00000526606 CHIC1Q5VXU3 224 aa32.08■■■□□ 2.73
AMBRA1-205ENST00000526606 NEURL4Q96JN8 1562 aa32.07■■■□□ 2.72
AMBRA1-205ENST00000526606 ZNF644Q9H582 1327 aaPredicted RBP32.06■■■□□ 2.72
AMBRA1-205ENST00000526606 FBXO31Q5XUX0 539 aaPredicted RBP32.06■■■□□ 2.72
AMBRA1-205ENST00000526606 TOM1O60784 492 aa32.05■■■□□ 2.72
AMBRA1-205ENST00000526606 SHANK2Q9UPX8 1470 aa32.04■■■□□ 2.72
AMBRA1-205ENST00000526606 ADGBQ8N7X0 1667 aa32.04■■■□□ 2.72
AMBRA1-205ENST00000526606 CCNB3Q8WWL7 1395 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms