RNA–Protein interactions for RNA: ENST00000525913.1

SSH3-204, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-204ENST00000525913 HECW1Q76N89 1606 aa12.19□□□□□ -0.46
SSH3-204ENST00000525913 LTBP4Q8N2S1 1624 aa12.19□□□□□ -0.46
SSH3-204ENST00000525913 EFCAB5A4FU69 1503 aa12.19□□□□□ -0.46
SSH3-204ENST00000525913 NUP153P49790 1475 aaKnown RBP12.19□□□□□ -0.46
SSH3-204ENST00000525913 SAMD9Q5K651 1589 aa12.18□□□□□ -0.46
SSH3-204ENST00000525913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.18□□□□□ -0.46
SSH3-204ENST00000525913 PLEKHD1A6NEE1 506 aa12.17□□□□□ -0.46
SSH3-204ENST00000525913 PTPRTO14522 1441 aa12.17□□□□□ -0.46
SSH3-204ENST00000525913 CFAP74Q9C0B2 1584 aa12.16□□□□□ -0.46
SSH3-204ENST00000525913 ATP10AO60312 1499 aa12.14□□□□□ -0.47
SSH3-204ENST00000525913 SCAPERQ9BY12 1400 aa12.13□□□□□ -0.47
SSH3-204ENST00000525913 IQSEC2Q5JU85 1478 aa12.13□□□□□ -0.47
SSH3-204ENST00000525913 UHRF1BP1Q6BDS2 1440 aa12.12□□□□□ -0.47
SSH3-204ENST00000525913 C9orf84Q5VXU9 1444 aa12.11□□□□□ -0.47
SSH3-204ENST00000525913 PLCH2O75038 1416 aa12.11□□□□□ -0.47
SSH3-204ENST00000525913 C3P01024 1663 aa12.09□□□□□ -0.47
SSH3-204ENST00000525913 NCOA1Q15788 1441 aa12.05□□□□□ -0.48
SSH3-204ENST00000525913 TRAPPC8Q9Y2L5 1435 aa12.04□□□□□ -0.48
SSH3-204ENST00000525913 AFAP1Q8N556 730 aa12.04□□□□□ -0.48
SSH3-204ENST00000525913 EFCAB2Q5VUJ9 269 aa12.03□□□□□ -0.48
SSH3-204ENST00000525913 UBAP1LF5GYI3 381 aa12.02□□□□□ -0.49
SSH3-204ENST00000525913 CSRNP3Q8WYN3 585 aa12.02□□□□□ -0.49
SSH3-204ENST00000525913 KDM5CP41229 1560 aa12.01□□□□□ -0.49
SSH3-204ENST00000525913 REREQ9P2R6 1566 aa12.01□□□□□ -0.49
SSH3-204ENST00000525913 RANGAP1P46060 587 aaPredicted RBP12.01□□□□□ -0.49
SSH3-204ENST00000525913 ZNF335Q9H4Z2 1342 aaPredicted RBP12.01□□□□□ -0.49
SSH3-204ENST00000525913 CDK13Q14004 1512 aaKnown RBP12.01□□□□□ -0.49
SSH3-204ENST00000525913 DIP2CQ9Y2E4 1556 aa12.01□□□□□ -0.49
SSH3-204ENST00000525913 MYO5CQ9NQX4 1742 aa12□□□□□ -0.49
SSH3-204ENST00000525913 NCKAP5LQ9HCH0 1330 aa12□□□□□ -0.49
SSH3-204ENST00000525913 CAMSAP1Q5T5Y3 1602 aa12□□□□□ -0.49
SSH3-204ENST00000525913 ZNF518AQ6AHZ1 1483 aa11.99□□□□□ -0.49
SSH3-204ENST00000525913 ABCA6Q8N139 1617 aa11.98□□□□□ -0.49
SSH3-204ENST00000525913 AGLP35573 1532 aa11.98□□□□□ -0.49
SSH3-204ENST00000525913 MLH3Q9UHC1 1453 aa11.97□□□□□ -0.49
SSH3-204ENST00000525913 MED1Q15648 1581 aaPredicted RBP11.96□□□□□ -0.49
SSH3-204ENST00000525913 HSPA1LP34931 641 aa11.96□□□□□ -0.49
SSH3-204ENST00000525913 KIF14Q15058 1648 aa11.95□□□□□ -0.5
SSH3-204ENST00000525913 CDC42BPBQ9Y5S2 1711 aa11.94□□□□□ -0.5
SSH3-204ENST00000525913 ESF1Q9H501 851 aaKnown RBP11.94□□□□□ -0.5
SSH3-204ENST00000525913 NPATQ14207 1427 aa11.94□□□□□ -0.5
SSH3-204ENST00000525913 ZMYM3Q14202 1370 aa11.93□□□□□ -0.5
SSH3-204ENST00000525913 KIDINS220Q9ULH0 1771 aa11.93□□□□□ -0.5
SSH3-204ENST00000525913 MYT1LQ9UL68 1186 aa11.93□□□□□ -0.5
SSH3-204ENST00000525913 CNTLNQ9NXG0 1405 aa11.93□□□□□ -0.5
SSH3-204ENST00000525913 MROH2AA6NES4 1674 aa11.92□□□□□ -0.5
SSH3-204ENST00000525913 TCOF1Q13428 1488 aaKnown RBP11.92□□□□□ -0.5
SSH3-204ENST00000525913 PKD2Q13563 968 aa11.92□□□□□ -0.5
SSH3-204ENST00000525913 ARHGAP5Q13017 1502 aa11.91□□□□□ -0.5
SSH3-204ENST00000525913 PLA2R1Q13018 1463 aa11.91□□□□□ -0.5
SSH3-204ENST00000525913 SUPT6HQ7KZ85 1726 aaKnown RBP11.89□□□□□ -0.51
SSH3-204ENST00000525913 ZNF142P52746 1687 aaPredicted RBP11.89□□□□□ -0.51
SSH3-204ENST00000525913 TROQ12816 1431 aaPredicted RBP11.88□□□□□ -0.51
SSH3-204ENST00000525913 PIP4K2BP78356 416 aa11.88□□□□□ -0.51
SSH3-204ENST00000525913 CDK11AQ9UQ88 783 aaPredicted RBP11.88□□□□□ -0.51
SSH3-204ENST00000525913 ITSN2Q9NZM3 1697 aa11.87□□□□□ -0.51
SSH3-204ENST00000525913 LRRIQ1Q96JM4 1722 aa11.87□□□□□ -0.51
SSH3-204ENST00000525913 TOM1O60784 492 aa11.87□□□□□ -0.51
SSH3-204ENST00000525913 ATP1B4Q9UN42 357 aaPredicted RBP11.87□□□□□ -0.51
SSH3-204ENST00000525913 PPP6R1Q9UPN7 881 aa11.87□□□□□ -0.51
SSH3-204ENST00000525913 PTPRKQ15262 1439 aa11.86□□□□□ -0.51
SSH3-204ENST00000525913 ABCC1P33527 1531 aa11.86□□□□□ -0.51
SSH3-204ENST00000525913 MYO3AQ8NEV4 1616 aa11.86□□□□□ -0.51
SSH3-204ENST00000525913 ALKQ9UM73 1620 aa11.86□□□□□ -0.51
SSH3-204ENST00000525913 CEP170BQ9Y4F5 1589 aaPredicted RBP11.86□□□□□ -0.51
SSH3-204ENST00000525913 CLTCQ00610 1675 aaKnown RBP11.85□□□□□ -0.51
SSH3-204ENST00000525913 RGS17Q9UGC6 210 aaPredicted RBP11.85□□□□□ -0.51
SSH3-204ENST00000525913 SCAF1Q9H7N4 1312 aaKnown RBP11.85□□□□□ -0.51
SSH3-204ENST00000525913 PREX2Q70Z35 1606 aa11.83□□□□□ -0.52
SSH3-204ENST00000525913 DNMT1P26358 1616 aaKnown RBP11.82□□□□□ -0.52
SSH3-204ENST00000525913 PHF23Q9BUL5 403 aaPredicted RBP11.82□□□□□ -0.52
SSH3-204ENST00000525913 FMN1Q68DA7 1419 aa11.82□□□□□ -0.52
SSH3-204ENST00000525913 SAMD9LQ8IVG5 1584 aa11.82□□□□□ -0.52
SSH3-204ENST00000525913 SHANK2Q9UPX8 1470 aa11.82□□□□□ -0.52
SSH3-204ENST00000525913 CPS1P31327 1500 aa11.81□□□□□ -0.52
SSH3-204ENST00000525913 CDC42BPAQ5VT25 1732 aa11.81□□□□□ -0.52
SSH3-204ENST00000525913 NEURL4Q96JN8 1562 aa11.8□□□□□ -0.52
SSH3-204ENST00000525913 EEA1Q15075 1411 aa11.8□□□□□ -0.52
SSH3-204ENST00000525913 ARHGAP35Q9NRY4 1499 aa11.8□□□□□ -0.52
SSH3-204ENST00000525913 CLIP1P30622 1438 aa11.79□□□□□ -0.52
SSH3-204ENST00000525913 A2ML1A8K2U0 1454 aa11.78□□□□□ -0.52
SSH3-204ENST00000525913 POLR1AO95602 1720 aaPredicted RBP11.78□□□□□ -0.52
SSH3-204ENST00000525913 PLXNC1O60486 1568 aa11.78□□□□□ -0.52
SSH3-204ENST00000525913 VWDEQ8N2E2 1590 aa11.78□□□□□ -0.52
SSH3-204ENST00000525913 HNRNPMP52272 730 aaKnown RBP eCLIP11.77□□□□□ -0.53
SSH3-204ENST00000525913 GGT6Q6P531 493 aa11.77□□□□□ -0.53
SSH3-204ENST00000525913 SPAG9O60271 1321 aaKnown RBP11.77□□□□□ -0.53
SSH3-204ENST00000525913 STRCP1A6NGW2 1772 aa11.76□□□□□ -0.53
SSH3-204ENST00000525913 A2MP01023 1474 aa11.75□□□□□ -0.53
SSH3-204ENST00000525913 FBXO31Q5XUX0 539 aaPredicted RBP11.74□□□□□ -0.53
SSH3-204ENST00000525913 ATP7AQ04656 1500 aa11.73□□□□□ -0.53
SSH3-204ENST00000525913 SYCP2Q9BX26 1530 aa11.73□□□□□ -0.53
SSH3-204ENST00000525913 ZNF777Q9ULD5 760 aaPredicted RBP11.73□□□□□ -0.53
SSH3-204ENST00000525913 INO80Q9ULG1 1556 aaPredicted RBP11.72□□□□□ -0.53
SSH3-204ENST00000525913 GPATCH8Q9UKJ3 1502 aaKnown RBP11.72□□□□□ -0.53
SSH3-204ENST00000525913 MED14O60244 1454 aa11.72□□□□□ -0.53
SSH3-204ENST00000525913 POTEAQ6S8J7 498 aa11.72□□□□□ -0.53
SSH3-204ENST00000525913 ANKLE2Q86XL3 938 aa11.72□□□□□ -0.53
SSH3-204ENST00000525913 KIAA1107Q9UPP5 1409 aa11.71□□□□□ -0.53
SSH3-204ENST00000525913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms