RNA–Protein interactions for RNA: ENST00000525523.1

AC055860.1-201, humanhuman

TSL 5 BASIC

Gene AC055860.1, Length 688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055860.1-201ENST00000525523 STRCQ7RTU9 1775 aa13.1□□□□□ -0.31
AC055860.1-201ENST00000525523 CFAP74Q9C0B2 1584 aa13.1□□□□□ -0.31
AC055860.1-201ENST00000525523 IQSEC2Q5JU85 1478 aa13.08□□□□□ -0.32
AC055860.1-201ENST00000525523 EFCAB5A4FU69 1503 aa13.08□□□□□ -0.32
AC055860.1-201ENST00000525523 ZMYM4Q5VZL5 1548 aa13.08□□□□□ -0.32
AC055860.1-201ENST00000525523 SIGLEC1Q9BZZ2 1709 aa13.08□□□□□ -0.32
AC055860.1-201ENST00000525523 RAPGEF3O95398 923 aa13.07□□□□□ -0.32
AC055860.1-201ENST00000525523 YEATS2Q9ULM3 1422 aa13.06□□□□□ -0.32
AC055860.1-201ENST00000525523 AKNAQ7Z591 1439 aa13.05□□□□□ -0.32
AC055860.1-201ENST00000525523 ZFYVE16Q7Z3T8 1539 aa13.05□□□□□ -0.32
AC055860.1-201ENST00000525523 SUPT5HO00267 1087 aaKnown RBP13.05□□□□□ -0.32
AC055860.1-201ENST00000525523 DENND4BO75064 1496 aaPredicted RBP13.03□□□□□ -0.32
AC055860.1-201ENST00000525523 FHOD3Q2V2M9 1422 aa13.02□□□□□ -0.33
AC055860.1-201ENST00000525523 ATP10BO94823 1461 aa13.01□□□□□ -0.33
AC055860.1-201ENST00000525523 ARHGEF12Q9NZN5 1544 aa13□□□□□ -0.33
AC055860.1-201ENST00000525523 LTBP4Q8N2S1 1624 aa12.99□□□□□ -0.33
AC055860.1-201ENST00000525523 MAGI2Q86UL8 1455 aa12.99□□□□□ -0.33
AC055860.1-201ENST00000525523 PTPRTO14522 1441 aa12.98□□□□□ -0.33
AC055860.1-201ENST00000525523 UHRF1BP1Q6BDS2 1440 aa12.98□□□□□ -0.33
AC055860.1-201ENST00000525523 SETD1BQ9UPS6 1966 aaKnown RBP12.98□□□□□ -0.33
AC055860.1-201ENST00000525523 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
AC055860.1-201ENST00000525523 RAPGEF6Q8TEU7 1601 aa12.98□□□□□ -0.33
AC055860.1-201ENST00000525523 HECW1Q76N89 1606 aa12.95□□□□□ -0.34
AC055860.1-201ENST00000525523 FAM9AQ8IZU1 332 aaPredicted RBP12.94□□□□□ -0.34
AC055860.1-201ENST00000525523 MED1Q15648 1581 aaPredicted RBP12.93□□□□□ -0.34
AC055860.1-201ENST00000525523 C9orf84Q5VXU9 1444 aa12.91□□□□□ -0.34
AC055860.1-201ENST00000525523 C3P01024 1663 aa12.9□□□□□ -0.34
AC055860.1-201ENST00000525523 ARID3CA6NKF2 412 aa12.9□□□□□ -0.34
AC055860.1-201ENST00000525523 SAMD9Q5K651 1589 aa12.9□□□□□ -0.35
AC055860.1-201ENST00000525523 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
AC055860.1-201ENST00000525523 MLECQ14165 292 aa12.89□□□□□ -0.35
AC055860.1-201ENST00000525523 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.88□□□□□ -0.35
AC055860.1-201ENST00000525523 ATP10AO60312 1499 aa12.87□□□□□ -0.35
AC055860.1-201ENST00000525523 NCOA1Q15788 1441 aa12.86□□□□□ -0.35
AC055860.1-201ENST00000525523 NUP153P49790 1475 aaKnown RBP12.85□□□□□ -0.35
AC055860.1-201ENST00000525523 REREQ9P2R6 1566 aa12.83□□□□□ -0.36
AC055860.1-201ENST00000525523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
AC055860.1-201ENST00000525523 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
AC055860.1-201ENST00000525523 SUPT6HQ7KZ85 1726 aaKnown RBP12.82□□□□□ -0.36
AC055860.1-201ENST00000525523 MYO5CQ9NQX4 1742 aa12.82□□□□□ -0.36
AC055860.1-201ENST00000525523 CEBPAP49715 358 aaPredicted RBP12.81□□□□□ -0.36
AC055860.1-201ENST00000525523 CAMSAP1Q5T5Y3 1602 aa12.8□□□□□ -0.36
AC055860.1-201ENST00000525523 PRXQ9BXM0 1461 aa12.8□□□□□ -0.36
AC055860.1-201ENST00000525523 KDM5CP41229 1560 aa12.8□□□□□ -0.36
AC055860.1-201ENST00000525523 ZNF142P52746 1687 aaPredicted RBP12.8□□□□□ -0.36
AC055860.1-201ENST00000525523 SCAPERQ9BY12 1400 aa12.79□□□□□ -0.36
AC055860.1-201ENST00000525523 DIP2CQ9Y2E4 1556 aa12.79□□□□□ -0.36
AC055860.1-201ENST00000525523 UBAP1LF5GYI3 381 aa12.79□□□□□ -0.36
AC055860.1-201ENST00000525523 SPINK5Q9NQ38 1064 aaPredicted RBP12.79□□□□□ -0.36
AC055860.1-201ENST00000525523 MROH2AA6NES4 1674 aa12.79□□□□□ -0.36
AC055860.1-201ENST00000525523 ZNF518AQ6AHZ1 1483 aa12.78□□□□□ -0.36
AC055860.1-201ENST00000525523 AGLP35573 1532 aa12.78□□□□□ -0.36
AC055860.1-201ENST00000525523 TRAPPC8Q9Y2L5 1435 aa12.77□□□□□ -0.37
AC055860.1-201ENST00000525523 ABCA6Q8N139 1617 aa12.76□□□□□ -0.37
AC055860.1-201ENST00000525523 PLEKHD1A6NEE1 506 aa12.75□□□□□ -0.37
AC055860.1-201ENST00000525523 MYO3AQ8NEV4 1616 aa12.74□□□□□ -0.37
AC055860.1-201ENST00000525523 PLA2R1Q13018 1463 aa12.74□□□□□ -0.37
AC055860.1-201ENST00000525523 PLCH2O75038 1416 aa12.74□□□□□ -0.37
AC055860.1-201ENST00000525523 P3H3Q8IVL6 736 aa12.74□□□□□ -0.37
AC055860.1-201ENST00000525523 CNTLNQ9NXG0 1405 aa12.73□□□□□ -0.37
AC055860.1-201ENST00000525523 NPATQ14207 1427 aa12.72□□□□□ -0.37
AC055860.1-201ENST00000525523 ZNF335Q9H4Z2 1342 aaPredicted RBP12.72□□□□□ -0.37
AC055860.1-201ENST00000525523 CAPN15O75808 1086 aa12.72□□□□□ -0.37
AC055860.1-201ENST00000525523 DSG3P32926 999 aa12.7□□□□□ -0.38
AC055860.1-201ENST00000525523 CEP170BQ9Y4F5 1589 aaPredicted RBP12.69□□□□□ -0.38
AC055860.1-201ENST00000525523 POLR1AO95602 1720 aaPredicted RBP12.69□□□□□ -0.38
AC055860.1-201ENST00000525523 ESF1Q9H501 851 aaKnown RBP12.69□□□□□ -0.38
AC055860.1-201ENST00000525523 TCOF1Q13428 1488 aaKnown RBP12.69□□□□□ -0.38
AC055860.1-201ENST00000525523 CPS1P31327 1500 aa12.68□□□□□ -0.38
AC055860.1-201ENST00000525523 HSPA1LP34931 641 aa12.68□□□□□ -0.38
AC055860.1-201ENST00000525523 KIF14Q15058 1648 aa12.68□□□□□ -0.38
AC055860.1-201ENST00000525523 CDK13Q14004 1512 aaKnown RBP12.67□□□□□ -0.38
AC055860.1-201ENST00000525523 MLH3Q9UHC1 1453 aa12.66□□□□□ -0.38
AC055860.1-201ENST00000525523 ARHGAP5Q13017 1502 aa12.66□□□□□ -0.38
AC055860.1-201ENST00000525523 ITSN2Q9NZM3 1697 aa12.65□□□□□ -0.38
AC055860.1-201ENST00000525523 PKD2Q13563 968 aa12.65□□□□□ -0.38
AC055860.1-201ENST00000525523 EFCAB2Q5VUJ9 269 aa12.64□□□□□ -0.39
AC055860.1-201ENST00000525523 TOM1O60784 492 aa12.63□□□□□ -0.39
AC055860.1-201ENST00000525523 CLTCQ00610 1675 aaKnown RBP12.63□□□□□ -0.39
AC055860.1-201ENST00000525523 KIDINS220Q9ULH0 1771 aa12.63□□□□□ -0.39
AC055860.1-201ENST00000525523 NCKAP5LQ9HCH0 1330 aa12.62□□□□□ -0.39
AC055860.1-201ENST00000525523 PIP4K2BP78356 416 aa12.62□□□□□ -0.39
AC055860.1-201ENST00000525523 CDC42BPBQ9Y5S2 1711 aa12.62□□□□□ -0.39
AC055860.1-201ENST00000525523 ABCC1P33527 1531 aa12.62□□□□□ -0.39
AC055860.1-201ENST00000525523 PREX2Q70Z35 1606 aa12.61□□□□□ -0.39
AC055860.1-201ENST00000525523 PTPRKQ15262 1439 aa12.61□□□□□ -0.39
AC055860.1-201ENST00000525523 MYT1LQ9UL68 1186 aa12.6□□□□□ -0.39
AC055860.1-201ENST00000525523 RNF17Q9BXT8 1623 aaKnown RBP12.59□□□□□ -0.39
AC055860.1-201ENST00000525523 ALKQ9UM73 1620 aa12.59□□□□□ -0.39
AC055860.1-201ENST00000525523 NEURL4Q96JN8 1562 aa12.58□□□□□ -0.4
AC055860.1-201ENST00000525523 SYNMO15061 1565 aa12.57□□□□□ -0.4
AC055860.1-201ENST00000525523 AFAP1Q8N556 730 aa12.57□□□□□ -0.4
AC055860.1-201ENST00000525523 DNMT1P26358 1616 aaKnown RBP12.57□□□□□ -0.4
AC055860.1-201ENST00000525523 SHANK2Q9UPX8 1470 aa12.57□□□□□ -0.4
AC055860.1-201ENST00000525523 ZMYM3Q14202 1370 aa12.56□□□□□ -0.4
AC055860.1-201ENST00000525523 A2ML1A8K2U0 1454 aa12.55□□□□□ -0.4
AC055860.1-201ENST00000525523 CLIP1P30622 1438 aa12.54□□□□□ -0.4
AC055860.1-201ENST00000525523 APLP2Q06481 763 aa12.54□□□□□ -0.4
AC055860.1-201ENST00000525523 PLXNC1O60486 1568 aa12.54□□□□□ -0.4
AC055860.1-201ENST00000525523 VWDEQ8N2E2 1590 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms