RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 G3V3G9 751 aa11.36□□□□□ -0.59
CSMD1-211ENST00000523062 PSEN1P49768 467 aa11.36□□□□□ -0.59
CSMD1-211ENST00000523062 FKBP8Q14318 412 aa11.36□□□□□ -0.59
CSMD1-211ENST00000523062 ERBB3P21860 1342 aa11.35□□□□□ -0.59
CSMD1-211ENST00000523062 CHRM1P11229 460 aaPredicted RBP11.35□□□□□ -0.59
CSMD1-211ENST00000523062 TRIM41Q8WV44 630 aa11.34□□□□□ -0.59
CSMD1-211ENST00000523062 DOK7Q18PE1 504 aa11.32□□□□□ -0.6
CSMD1-211ENST00000523062 DPY19L2Q6NUT2 758 aa11.32□□□□□ -0.6
CSMD1-211ENST00000523062 MYT1LQ9UL68 1186 aa11.31□□□□□ -0.6
CSMD1-211ENST00000523062 BOLA1Q9Y3E2 137 aa11.31□□□□□ -0.6
CSMD1-211ENST00000523062 RIMBP2O15034 1052 aa11.27□□□□□ -0.61
CSMD1-211ENST00000523062 FBXO3Q9UK99 471 aa11.27□□□□□ -0.61
CSMD1-211ENST00000523062 CC2D2AQ9P2K1 1620 aa11.27□□□□□ -0.61
CSMD1-211ENST00000523062 PDAP1Q13442 181 aaKnown RBP11.26□□□□□ -0.61
CSMD1-211ENST00000523062 ABCC8Q09428 1581 aa11.24□□□□□ -0.61
CSMD1-211ENST00000523062 PTGER2P43116 358 aa11.23□□□□□ -0.61
CSMD1-211ENST00000523062 VARS2Q5ST30 1063 aaKnown RBP11.23□□□□□ -0.61
CSMD1-211ENST00000523062 KLHL34Q8N239 644 aa11.23□□□□□ -0.61
CSMD1-211ENST00000523062 ZNF687Q8N1G0 1237 aa11.21□□□□□ -0.61
CSMD1-211ENST00000523062 CABP2Q9NPB3 220 aa11.2□□□□□ -0.62
CSMD1-211ENST00000523062 ZSWIM6Q9HCJ5 1215 aa11.19□□□□□ -0.62
CSMD1-211ENST00000523062 WRNQ14191 1432 aaPredicted RBP eCLIP11.18□□□□□ -0.62
CSMD1-211ENST00000523062 VASPP50552 380 aaPredicted RBP11.17□□□□□ -0.62
CSMD1-211ENST00000523062 CFTRP13569 1480 aa11.16□□□□□ -0.62
CSMD1-211ENST00000523062 SYNJ1O43426 1573 aa11.12□□□□□ -0.63
CSMD1-211ENST00000523062 EEA1Q15075 1411 aa11.11□□□□□ -0.63
CSMD1-211ENST00000523062 LOC105371045A0A1W2PR82 267 aa11.11□□□□□ -0.63
CSMD1-211ENST00000523062 FAM9AQ8IZU1 332 aaPredicted RBP11.11□□□□□ -0.63
CSMD1-211ENST00000523062 PRDM2Q13029 1718 aa11.1□□□□□ -0.63
CSMD1-211ENST00000523062 CADPSQ9ULU8 1353 aa11.1□□□□□ -0.63
CSMD1-211ENST00000523062 GPR153Q6NV75 609 aa11.08□□□□□ -0.64
CSMD1-211ENST00000523062 TOP2BQ02880 1626 aa11.08□□□□□ -0.64
CSMD1-211ENST00000523062 BIVM-ERCC5R4GMW8 1640 aa11.07□□□□□ -0.64
CSMD1-211ENST00000523062 ANKRD13DQ6ZTN6 518 aa11.07□□□□□ -0.64
CSMD1-211ENST00000523062 TMEM92Q6UXU6 159 aa11.06□□□□□ -0.64
CSMD1-211ENST00000523062 SOGA1O94964 1423 aa11.04□□□□□ -0.64
CSMD1-211ENST00000523062 EFCAB3Q8N7B9 438 aa11.02□□□□□ -0.65
CSMD1-211ENST00000523062 CUX1P39880 1505 aa11.02□□□□□ -0.65
CSMD1-211ENST00000523062 MICALL2Q8IY33 904 aa11.01□□□□□ -0.65
CSMD1-211ENST00000523062 CIZ1Q9ULV3 898 aaPredicted RBP11.01□□□□□ -0.65
CSMD1-211ENST00000523062 LAMC3Q9Y6N6 1575 aa10.99□□□□□ -0.65
CSMD1-211ENST00000523062 SPOCK2Q92563 424 aa10.99□□□□□ -0.65
CSMD1-211ENST00000523062 FANCD2Q9BXW9 1451 aa10.99□□□□□ -0.65
CSMD1-211ENST00000523062 LSM11P83369 360 aaKnown RBP eCLIP10.98□□□□□ -0.65
CSMD1-211ENST00000523062 RUSC2Q8N2Y8 1516 aa10.98□□□□□ -0.65
CSMD1-211ENST00000523062 ARSIQ5FYB1 569 aa10.97□□□□□ -0.65
CSMD1-211ENST00000523062 IFNLR1Q8IU57 520 aaPredicted RBP10.97□□□□□ -0.65
CSMD1-211ENST00000523062 ZNF316A6NFI3 1004 aaPredicted RBP10.96□□□□□ -0.65
CSMD1-211ENST00000523062 PLA2G2EQ9NZK7 142 aa10.96□□□□□ -0.65
CSMD1-211ENST00000523062 GOLGA3Q08378 1498 aa10.95□□□□□ -0.66
CSMD1-211ENST00000523062 KIF21BO75037 1637 aa10.95□□□□□ -0.66
CSMD1-211ENST00000523062 CEP164Q9UPV0 1460 aa10.94□□□□□ -0.66
CSMD1-211ENST00000523062 NESP48681 1621 aa10.94□□□□□ -0.66
CSMD1-211ENST00000523062 HCSTQ9UBK5 93 aa10.93□□□□□ -0.66
CSMD1-211ENST00000523062 TNIKQ9UKE5 1360 aa10.91□□□□□ -0.66
CSMD1-211ENST00000523062 DNMBPQ6XZF7 1577 aa10.91□□□□□ -0.66
CSMD1-211ENST00000523062 SOX12O15370 315 aa10.91□□□□□ -0.66
CSMD1-211ENST00000523062 KIF27Q86VH2 1401 aa10.91□□□□□ -0.66
CSMD1-211ENST00000523062 PDS5BQ9NTI5 1447 aa10.91□□□□□ -0.66
CSMD1-211ENST00000523062 PBX2P40425 430 aa10.9□□□□□ -0.66
CSMD1-211ENST00000523062 MS4A4AQ96JQ5 239 aa10.9□□□□□ -0.66
CSMD1-211ENST00000523062 FGD5Q6ZNL6 1462 aa10.89□□□□□ -0.67
CSMD1-211ENST00000523062 TOPBP1Q92547 1522 aa10.88□□□□□ -0.67
CSMD1-211ENST00000523062 CEP162Q5TB80 1403 aa10.86□□□□□ -0.67
CSMD1-211ENST00000523062 KHSRPQ92945 711 aaKnown RBP eCLIP10.86□□□□□ -0.67
CSMD1-211ENST00000523062 ERICH3Q5RHP9 1530 aa10.85□□□□□ -0.67
CSMD1-211ENST00000523062 CUX2O14529 1486 aa10.85□□□□□ -0.67
CSMD1-211ENST00000523062 PRXQ9BXM0 1461 aa10.85□□□□□ -0.67
CSMD1-211ENST00000523062 UBTFP17480 764 aaKnown RBP10.84□□□□□ -0.67
CSMD1-211ENST00000523062 URB2Q14146 1524 aaKnown RBP10.84□□□□□ -0.67
CSMD1-211ENST00000523062 RAPGEF2Q9Y4G8 1499 aa10.83□□□□□ -0.68
CSMD1-211ENST00000523062 POLA1P09884 1462 aaPredicted RBP10.82□□□□□ -0.68
CSMD1-211ENST00000523062 PHF8Q9UPP1 1060 aa10.82□□□□□ -0.68
CSMD1-211ENST00000523062 ABCA10Q8WWZ4 1543 aa10.81□□□□□ -0.68
CSMD1-211ENST00000523062 KIF21AQ7Z4S6 1674 aa10.81□□□□□ -0.68
CSMD1-211ENST00000523062 POTEEQ6S8J3 1075 aa10.78□□□□□ -0.68
CSMD1-211ENST00000523062 MRC2Q9UBG0 1479 aa10.77□□□□□ -0.69
CSMD1-211ENST00000523062 RAD54L2Q9Y4B4 1467 aa10.77□□□□□ -0.69
CSMD1-211ENST00000523062 IGF1RP08069 1367 aa10.77□□□□□ -0.69
CSMD1-211ENST00000523062 CLIP1P30622 1438 aa10.76□□□□□ -0.69
CSMD1-211ENST00000523062 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.76□□□□□ -0.69
CSMD1-211ENST00000523062 ZFP91Q96JP5 570 aaPredicted RBP10.76□□□□□ -0.69
CSMD1-211ENST00000523062 AXIN2Q9Y2T1 843 aa10.76□□□□□ -0.69
CSMD1-211ENST00000523062 NUDT7P0C024 238 aa10.75□□□□□ -0.69
CSMD1-211ENST00000523062 RNF25Q96BH1 459 aaPredicted RBP10.75□□□□□ -0.69
CSMD1-211ENST00000523062 WDR97A6NE52 1622 aa10.75□□□□□ -0.69
CSMD1-211ENST00000523062 RIOK3O14730 519 aaKnown RBP10.74□□□□□ -0.69
CSMD1-211ENST00000523062 TRIM26Q12899 539 aaPredicted RBP10.73□□□□□ -0.69
CSMD1-211ENST00000523062 ADGRD1Q6QNK2 874 aa10.73□□□□□ -0.69
CSMD1-211ENST00000523062 LHX6Q9UPM6 363 aa10.73□□□□□ -0.69
CSMD1-211ENST00000523062 CARMIL1Q5VZK9 1371 aa10.73□□□□□ -0.69
CSMD1-211ENST00000523062 PCGF6Q9BYE7 350 aa10.72□□□□□ -0.69
CSMD1-211ENST00000523062 KIF3CO14782 793 aa10.71□□□□□ -0.69
CSMD1-211ENST00000523062 CUL7Q14999 1698 aa10.71□□□□□ -0.69
CSMD1-211ENST00000523062 ABCA5Q8WWZ7 1642 aa10.71□□□□□ -0.69
CSMD1-211ENST00000523062 WDR62O43379 1518 aa10.7□□□□□ -0.7
CSMD1-211ENST00000523062 ARHGAP33O14559 1287 aa10.7□□□□□ -0.7
CSMD1-211ENST00000523062 NLRP6P59044 892 aa10.7□□□□□ -0.7
CSMD1-211ENST00000523062 VGFO15240 615 aaPredicted RBP10.69□□□□□ -0.7
CSMD1-211ENST00000523062 SLC34A2O95436 690 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms