RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 PCDHB8Q9UN66 801 aa12.21□□□□□ -0.45
VPS13B-211ENST00000522802 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
VPS13B-211ENST00000522802 IFNL1Q8IU54 200 aa12.2□□□□□ -0.46
VPS13B-211ENST00000522802 CCDC88BA6NC98 1476 aa12.2□□□□□ -0.46
VPS13B-211ENST00000522802 POLA1P09884 1462 aaPredicted RBP12.18□□□□□ -0.46
VPS13B-211ENST00000522802 ABCC8Q09428 1581 aa12.18□□□□□ -0.46
VPS13B-211ENST00000522802 TRPC6Q9Y210 931 aa12.17□□□□□ -0.46
VPS13B-211ENST00000522802 BMP2KQ9NSY1 1161 aaPredicted RBP12.16□□□□□ -0.46
VPS13B-211ENST00000522802 SNAPC4Q5SXM2 1469 aa12.15□□□□□ -0.46
VPS13B-211ENST00000522802 CHGAP10645 457 aaKnown RBP12.15□□□□□ -0.46
VPS13B-211ENST00000522802 MAMSTRQ6ZN01 415 aa12.14□□□□□ -0.47
VPS13B-211ENST00000522802 RAD54L2Q9Y4B4 1467 aa12.14□□□□□ -0.47
VPS13B-211ENST00000522802 SYNJ1O43426 1573 aa12.13□□□□□ -0.47
VPS13B-211ENST00000522802 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.13□□□□□ -0.47
VPS13B-211ENST00000522802 POTEFA5A3E0 1075 aa12.13□□□□□ -0.47
VPS13B-211ENST00000522802 PDAP1Q13442 181 aaKnown RBP12.13□□□□□ -0.47
VPS13B-211ENST00000522802 HS6ST3Q8IZP7 471 aa12.13□□□□□ -0.47
VPS13B-211ENST00000522802 ZFP91Q96JP5 570 aaPredicted RBP12.13□□□□□ -0.47
VPS13B-211ENST00000522802 PSEN1P49768 467 aa12.1□□□□□ -0.47
VPS13B-211ENST00000522802 TDRD9Q8NDG6 1382 aaKnown RBP12.09□□□□□ -0.47
VPS13B-211ENST00000522802 STK25O00506 426 aa12.09□□□□□ -0.47
VPS13B-211ENST00000522802 LCE2DQ5TA82 110 aaPredicted RBP12.09□□□□□ -0.47
VPS13B-211ENST00000522802 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
VPS13B-211ENST00000522802 BBXQ8WY36 941 aaPredicted RBP12.08□□□□□ -0.48
VPS13B-211ENST00000522802 SCUBE2Q9NQ36 999 aa12.08□□□□□ -0.48
VPS13B-211ENST00000522802 TIE1P35590 1138 aa12.07□□□□□ -0.48
VPS13B-211ENST00000522802 BCL11BQ9C0K0 894 aaPredicted RBP12.07□□□□□ -0.48
VPS13B-211ENST00000522802 GAPVD1Q14C86 1478 aa12.07□□□□□ -0.48
VPS13B-211ENST00000522802 MAGI1Q96QZ7 1491 aaPredicted RBP12.07□□□□□ -0.48
VPS13B-211ENST00000522802 FGD5Q6ZNL6 1462 aa12.05□□□□□ -0.48
VPS13B-211ENST00000522802 PBRM1Q86U86 1689 aa12.05□□□□□ -0.48
VPS13B-211ENST00000522802 SOGA1O94964 1423 aa12.04□□□□□ -0.48
VPS13B-211ENST00000522802 SYNJ2O15056 1496 aa12.04□□□□□ -0.48
VPS13B-211ENST00000522802 FAM163AQ96GL9 167 aaPredicted RBP12.04□□□□□ -0.48
VPS13B-211ENST00000522802 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
VPS13B-211ENST00000522802 ERCC6L2Q5T890 1561 aa12.04□□□□□ -0.48
VPS13B-211ENST00000522802 TTLL13PA6NNM8 815 aa12.03□□□□□ -0.48
VPS13B-211ENST00000522802 COLQQ9Y215 455 aaPredicted RBP12.02□□□□□ -0.49
VPS13B-211ENST00000522802 GRIN2BQ13224 1484 aa12.02□□□□□ -0.49
VPS13B-211ENST00000522802 PCDH10Q9P2E7 1040 aa12.01□□□□□ -0.49
VPS13B-211ENST00000522802 KIF13AQ9H1H9 1805 aa12□□□□□ -0.49
VPS13B-211ENST00000522802 CHMP7Q8WUX9 453 aaPredicted RBP12□□□□□ -0.49
VPS13B-211ENST00000522802 CUX1P39880 1505 aa12□□□□□ -0.49
VPS13B-211ENST00000522802 TMEM106CQ9BVX2 250 aa11.99□□□□□ -0.49
VPS13B-211ENST00000522802 NKX1-1Q15270 411 aaPredicted RBP11.98□□□□□ -0.49
VPS13B-211ENST00000522802 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.98□□□□□ -0.49
VPS13B-211ENST00000522802 SEC24BO95487 1268 aa11.96□□□□□ -0.49
VPS13B-211ENST00000522802 ABCA5Q8WWZ7 1642 aa11.96□□□□□ -0.5
VPS13B-211ENST00000522802 TRIM35Q9UPQ4 493 aa11.95□□□□□ -0.5
VPS13B-211ENST00000522802 CEP170Q5SW79 1584 aa11.93□□□□□ -0.5
VPS13B-211ENST00000522802 PLCB2Q00722 1185 aa11.93□□□□□ -0.5
VPS13B-211ENST00000522802 CABP2Q9NPB3 220 aa11.93□□□□□ -0.5
VPS13B-211ENST00000522802 SHROOM2Q13796 1616 aa11.91□□□□□ -0.5
VPS13B-211ENST00000522802 ADAMTS12P58397 1594 aa11.9□□□□□ -0.5
VPS13B-211ENST00000522802 IER5LQ5T953 404 aa11.9□□□□□ -0.5
VPS13B-211ENST00000522802 EFCAB3Q8N7B9 438 aa11.9□□□□□ -0.5
VPS13B-211ENST00000522802 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
VPS13B-211ENST00000522802 GRIN2AQ12879 1464 aa11.89□□□□□ -0.51
VPS13B-211ENST00000522802 PAXIP1Q6ZW49 1069 aaPredicted RBP11.89□□□□□ -0.51
VPS13B-211ENST00000522802 GTPBP6O43824 516 aaPredicted RBP11.88□□□□□ -0.51
VPS13B-211ENST00000522802 SOX12O15370 315 aa11.87□□□□□ -0.51
VPS13B-211ENST00000522802 ABCA10Q8WWZ4 1543 aa11.86□□□□□ -0.51
VPS13B-211ENST00000522802 CFAP44Q96MT7 982 aa11.86□□□□□ -0.51
VPS13B-211ENST00000522802 NUP160Q12769 1436 aa11.86□□□□□ -0.51
VPS13B-211ENST00000522802 GOLGA2Q08379 1002 aa11.85□□□□□ -0.51
VPS13B-211ENST00000522802 MFRPQ9BY79 579 aa11.85□□□□□ -0.51
VPS13B-211ENST00000522802 ILDR1Q86SU0 546 aaPredicted RBP11.84□□□□□ -0.51
VPS13B-211ENST00000522802 RYDENQ9NUL5 291 aaKnown RBP11.83□□□□□ -0.52
VPS13B-211ENST00000522802 MKRN3Q13064 507 aaKnown RBP11.82□□□□□ -0.52
VPS13B-211ENST00000522802 DIP2BQ9P265 1576 aa11.82□□□□□ -0.52
VPS13B-211ENST00000522802 FBXO22Q8NEZ5 403 aa11.81□□□□□ -0.52
VPS13B-211ENST00000522802 PHF8Q9UPP1 1060 aa11.81□□□□□ -0.52
VPS13B-211ENST00000522802 KDM6BO15054 1643 aa11.8□□□□□ -0.52
VPS13B-211ENST00000522802 NLRP6P59044 892 aa11.8□□□□□ -0.52
VPS13B-211ENST00000522802 SLAIN1Q8ND83 568 aa11.8□□□□□ -0.52
VPS13B-211ENST00000522802 KDM4FA0A1W2PPD8 638 aa11.79□□□□□ -0.52
VPS13B-211ENST00000522802 ABCC10Q5T3U5 1492 aa11.78□□□□□ -0.52
VPS13B-211ENST00000522802 MAPKBP1O60336 1514 aa11.78□□□□□ -0.52
VPS13B-211ENST00000522802 SLC24A1O60721 1099 aa11.77□□□□□ -0.53
VPS13B-211ENST00000522802 PLCG2P16885 1265 aa11.77□□□□□ -0.53
VPS13B-211ENST00000522802 ADCY10Q96PN6 1610 aa11.77□□□□□ -0.53
VPS13B-211ENST00000522802 IRX5P78411 483 aaPredicted RBP11.76□□□□□ -0.53
VPS13B-211ENST00000522802 CDAN1Q8IWY9 1227 aa11.76□□□□□ -0.53
VPS13B-211ENST00000522802 TSPOAP1O95153 1857 aa11.76□□□□□ -0.53
VPS13B-211ENST00000522802 RUSC2Q8N2Y8 1516 aa11.76□□□□□ -0.53
VPS13B-211ENST00000522802 MS4A4AQ96JQ5 239 aa11.75□□□□□ -0.53
VPS13B-211ENST00000522802 PRG4Q92954 1404 aaPredicted RBP11.75□□□□□ -0.53
VPS13B-211ENST00000522802 ST18O60284 1047 aa11.74□□□□□ -0.53
VPS13B-211ENST00000522802 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.74□□□□□ -0.532e-7■■■□□ 16
VPS13B-211ENST00000522802 FHAD1B1AJZ9 1412 aa11.74□□□□□ -0.53
VPS13B-211ENST00000522802 FAM69CQ0P6D2 419 aa11.73□□□□□ -0.53
VPS13B-211ENST00000522802 BIVM-ERCC5R4GMW8 1640 aa11.71□□□□□ -0.53
VPS13B-211ENST00000522802 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
VPS13B-211ENST00000522802 ERICH3Q5RHP9 1530 aa11.7□□□□□ -0.54
VPS13B-211ENST00000522802 PPP1R37O75864 691 aa11.7□□□□□ -0.54
VPS13B-211ENST00000522802 OCEL1Q9H607 264 aa11.7□□□□□ -0.54
VPS13B-211ENST00000522802 WRNQ14191 1432 aaPredicted RBP eCLIP11.69□□□□□ -0.54
VPS13B-211ENST00000522802 PDCD7Q8N8D1 485 aaKnown RBP11.69□□□□□ -0.54
VPS13B-211ENST00000522802 TSHZ2Q9NRE2 1034 aa11.69□□□□□ -0.54
VPS13B-211ENST00000522802 TOP2BQ02880 1626 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms