RNA–Protein interactions for RNA: ENST00000522638.1

IGKV3D-34-201, Transcript of immunoglobulin kappa variable 3D-34 (pseudogene), humanhuman

BASIC

Gene IGKV3D-34, Length 302 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-34-201ENST00000522638 NCOA1Q15788 1441 aa10.66□□□□□ -0.7
IGKV3D-34-201ENST00000522638 CEBPAP49715 358 aaPredicted RBP10.64□□□□□ -0.71
IGKV3D-34-201ENST00000522638 MLECQ14165 292 aa10.63□□□□□ -0.71
IGKV3D-34-201ENST00000522638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.63□□□□□ -0.71
IGKV3D-34-201ENST00000522638 C9orf84Q5VXU9 1444 aa10.62□□□□□ -0.71
IGKV3D-34-201ENST00000522638 ARID3CA6NKF2 412 aa10.62□□□□□ -0.71
IGKV3D-34-201ENST00000522638 ATP10AO60312 1499 aa10.61□□□□□ -0.71
IGKV3D-34-201ENST00000522638 SAMD9Q5K651 1589 aa10.6□□□□□ -0.71
IGKV3D-34-201ENST00000522638 CAMSAP1Q5T5Y3 1602 aa10.6□□□□□ -0.71
IGKV3D-34-201ENST00000522638 UBAP1LF5GYI3 381 aa10.59□□□□□ -0.71
IGKV3D-34-201ENST00000522638 SUPT5HO00267 1087 aaKnown RBP10.59□□□□□ -0.71
IGKV3D-34-201ENST00000522638 NUP153P49790 1475 aaKnown RBP10.59□□□□□ -0.71
IGKV3D-34-201ENST00000522638 REREQ9P2R6 1566 aa10.59□□□□□ -0.71
IGKV3D-34-201ENST00000522638 ZNF142P52746 1687 aaPredicted RBP10.58□□□□□ -0.72
IGKV3D-34-201ENST00000522638 SUPT6HQ7KZ85 1726 aaKnown RBP10.58□□□□□ -0.72
IGKV3D-34-201ENST00000522638 ZNF335Q9H4Z2 1342 aaPredicted RBP10.57□□□□□ -0.72
IGKV3D-34-201ENST00000522638 DIP2CQ9Y2E4 1556 aa10.56□□□□□ -0.72
IGKV3D-34-201ENST00000522638 ALKQ9UM73 1620 aa10.56□□□□□ -0.72
IGKV3D-34-201ENST00000522638 HSPA1LP34931 641 aa10.56□□□□□ -0.72
IGKV3D-34-201ENST00000522638 KDM5CP41229 1560 aa10.56□□□□□ -0.72
IGKV3D-34-201ENST00000522638 MROH2AA6NES4 1674 aa10.55□□□□□ -0.72
IGKV3D-34-201ENST00000522638 ABCA6Q8N139 1617 aa10.55□□□□□ -0.72
IGKV3D-34-201ENST00000522638 TRAPPC8Q9Y2L5 1435 aa10.54□□□□□ -0.72
IGKV3D-34-201ENST00000522638 MYO5CQ9NQX4 1742 aa10.53□□□□□ -0.72
IGKV3D-34-201ENST00000522638 SCAPERQ9BY12 1400 aa10.53□□□□□ -0.72
IGKV3D-34-201ENST00000522638 MYO3AQ8NEV4 1616 aa10.53□□□□□ -0.72
IGKV3D-34-201ENST00000522638 AGLP35573 1532 aa10.53□□□□□ -0.72
IGKV3D-34-201ENST00000522638 TCOF1Q13428 1488 aaKnown RBP10.52□□□□□ -0.73
IGKV3D-34-201ENST00000522638 PLA2R1Q13018 1463 aa10.51□□□□□ -0.73
IGKV3D-34-201ENST00000522638 PRXQ9BXM0 1461 aa10.5□□□□□ -0.73
IGKV3D-34-201ENST00000522638 POLR1AO95602 1720 aaPredicted RBP10.5□□□□□ -0.73
IGKV3D-34-201ENST00000522638 PHF23Q9BUL5 403 aaPredicted RBP10.49□□□□□ -0.73
IGKV3D-34-201ENST00000522638 SETD1AO15047 1707 aaKnown RBP10.49□□□□□ -0.73
IGKV3D-34-201ENST00000522638 PLCH2O75038 1416 aa10.49□□□□□ -0.73
IGKV3D-34-201ENST00000522638 NPATQ14207 1427 aa10.48□□□□□ -0.73
IGKV3D-34-201ENST00000522638 ZNF518AQ6AHZ1 1483 aa10.48□□□□□ -0.73
IGKV3D-34-201ENST00000522638 CEP170BQ9Y4F5 1589 aaPredicted RBP10.48□□□□□ -0.73
IGKV3D-34-201ENST00000522638 P3H3Q8IVL6 736 aa10.47□□□□□ -0.73
IGKV3D-34-201ENST00000522638 NCKAP5LQ9HCH0 1330 aa10.47□□□□□ -0.73
IGKV3D-34-201ENST00000522638 CPS1P31327 1500 aa10.47□□□□□ -0.73
IGKV3D-34-201ENST00000522638 RGS17Q9UGC6 210 aaPredicted RBP10.46□□□□□ -0.73
IGKV3D-34-201ENST00000522638 NEURL4Q96JN8 1562 aa10.46□□□□□ -0.74
IGKV3D-34-201ENST00000522638 CNTLNQ9NXG0 1405 aa10.45□□□□□ -0.74
IGKV3D-34-201ENST00000522638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.45□□□□□ -0.74
IGKV3D-34-201ENST00000522638 HNRNPUL2Q1KMD3 747 aaKnown RBP10.45□□□□□ -0.74
IGKV3D-34-201ENST00000522638 KIDINS220Q9ULH0 1771 aa10.44□□□□□ -0.74
IGKV3D-34-201ENST00000522638 PIP4K2BP78356 416 aa10.44□□□□□ -0.74
IGKV3D-34-201ENST00000522638 CLTCQ00610 1675 aaKnown RBP10.44□□□□□ -0.74
IGKV3D-34-201ENST00000522638 ITSN2Q9NZM3 1697 aa10.43□□□□□ -0.74
IGKV3D-34-201ENST00000522638 KIF14Q15058 1648 aa10.43□□□□□ -0.74
IGKV3D-34-201ENST00000522638 VWDEQ8N2E2 1590 aa10.43□□□□□ -0.74
IGKV3D-34-201ENST00000522638 MLH3Q9UHC1 1453 aa10.42□□□□□ -0.74
IGKV3D-34-201ENST00000522638 STRCP1A6NGW2 1772 aa10.42□□□□□ -0.74
IGKV3D-34-201ENST00000522638 CDC42BPBQ9Y5S2 1711 aa10.42□□□□□ -0.74
IGKV3D-34-201ENST00000522638 SCAF1Q9H7N4 1312 aaKnown RBP10.42□□□□□ -0.74
IGKV3D-34-201ENST00000522638 PLEKHD1A6NEE1 506 aa10.42□□□□□ -0.74
IGKV3D-34-201ENST00000522638 PKD2Q13563 968 aa10.42□□□□□ -0.74
IGKV3D-34-201ENST00000522638 CDK13Q14004 1512 aaKnown RBP10.42□□□□□ -0.74
IGKV3D-34-201ENST00000522638 DNMT1P26358 1616 aaKnown RBP10.41□□□□□ -0.74
IGKV3D-34-201ENST00000522638 FAM9AQ8IZU1 332 aaPredicted RBP10.41□□□□□ -0.74
IGKV3D-34-201ENST00000522638 SHANK2Q9UPX8 1470 aa10.41□□□□□ -0.74
IGKV3D-34-201ENST00000522638 TOM1O60784 492 aa10.4□□□□□ -0.74
IGKV3D-34-201ENST00000522638 RNF17Q9BXT8 1623 aaKnown RBP10.4□□□□□ -0.75
IGKV3D-34-201ENST00000522638 PPP6R1Q9UPN7 881 aa10.39□□□□□ -0.75
IGKV3D-34-201ENST00000522638 PTPRKQ15262 1439 aa10.39□□□□□ -0.75
IGKV3D-34-201ENST00000522638 ABCC1P33527 1531 aa10.38□□□□□ -0.75
IGKV3D-34-201ENST00000522638 SYNMO15061 1565 aa10.37□□□□□ -0.75
IGKV3D-34-201ENST00000522638 AFAP1Q8N556 730 aa10.37□□□□□ -0.75
IGKV3D-34-201ENST00000522638 ARHGAP5Q13017 1502 aa10.37□□□□□ -0.75
IGKV3D-34-201ENST00000522638 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
IGKV3D-34-201ENST00000522638 PREX2Q70Z35 1606 aa10.36□□□□□ -0.75
IGKV3D-34-201ENST00000522638 XIRP1Q702N8 1843 aaKnown RBP10.35□□□□□ -0.75
IGKV3D-34-201ENST00000522638 EFCAB2Q5VUJ9 269 aa10.35□□□□□ -0.75
IGKV3D-34-201ENST00000522638 A2ML1A8K2U0 1454 aa10.35□□□□□ -0.75
IGKV3D-34-201ENST00000522638 PLXNC1O60486 1568 aa10.35□□□□□ -0.75
IGKV3D-34-201ENST00000522638 SRCAPQ6ZRS2 3230 aa10.34□□□□□ -0.75
IGKV3D-34-201ENST00000522638 LRRIQ1Q96JM4 1722 aa10.34□□□□□ -0.75
IGKV3D-34-201ENST00000522638 POTEAQ6S8J7 498 aa10.34□□□□□ -0.75
IGKV3D-34-201ENST00000522638 ESF1Q9H501 851 aaKnown RBP10.34□□□□□ -0.75
IGKV3D-34-201ENST00000522638 DEPDC5O75140 1603 aa10.33□□□□□ -0.76
IGKV3D-34-201ENST00000522638 IQGAP1P46940 1657 aa10.31□□□□□ -0.76
IGKV3D-34-201ENST00000522638 SAMD9LQ8IVG5 1584 aa10.31□□□□□ -0.76
IGKV3D-34-201ENST00000522638 LRRC7Q96NW7 1537 aa10.31□□□□□ -0.76
IGKV3D-34-201ENST00000522638 CDC42BPAQ5VT25 1732 aa10.3□□□□□ -0.76
IGKV3D-34-201ENST00000522638 MED14O60244 1454 aa10.3□□□□□ -0.76
IGKV3D-34-201ENST00000522638 ZC3H13Q5T200 1668 aaKnown RBP10.29□□□□□ -0.76
IGKV3D-34-201ENST00000522638 INO80Q9ULG1 1556 aaPredicted RBP10.29□□□□□ -0.76
IGKV3D-34-201ENST00000522638 SENP3Q9H4L4 574 aaPredicted RBP10.27□□□□□ -0.77
IGKV3D-34-201ENST00000522638 TROQ12816 1431 aaPredicted RBP10.26□□□□□ -0.77
IGKV3D-34-201ENST00000522638 MYT1LQ9UL68 1186 aa10.26□□□□□ -0.77
IGKV3D-34-201ENST00000522638 ADGBQ8N7X0 1667 aa10.25□□□□□ -0.77
IGKV3D-34-201ENST00000522638 NPHP4O75161 1426 aaPredicted RBP10.24□□□□□ -0.77
IGKV3D-34-201ENST00000522638 ATP7AQ04656 1500 aa10.24□□□□□ -0.77
IGKV3D-34-201ENST00000522638 UPF1Q92900 1129 aaKnown RBP eCLIP10.24□□□□□ -0.77
IGKV3D-34-201ENST00000522638 ROBO1Q9Y6N7 1651 aa10.23□□□□□ -0.77
IGKV3D-34-201ENST00000522638 SYCP2Q9BX26 1530 aa10.22□□□□□ -0.77
IGKV3D-34-201ENST00000522638 A2MP01023 1474 aa10.21□□□□□ -0.78
IGKV3D-34-201ENST00000522638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.2□□□□□ -0.78
IGKV3D-34-201ENST00000522638 UGGT1Q9NYU2 1555 aa10.19□□□□□ -0.78
IGKV3D-34-201ENST00000522638 PZPP20742 1482 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms