RNA–Protein interactions for RNA: ENST00000519952.5

R3HCC1-205, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-205ENST00000519952 CEBPAP49715 358 aaPredicted RBP19.18■□□□□ 0.66
R3HCC1-205ENST00000519952 AKNAQ7Z591 1439 aa19.17■□□□□ 0.66
R3HCC1-205ENST00000519952 UHRF1BP1Q6BDS2 1440 aa19.15■□□□□ 0.66
R3HCC1-205ENST00000519952 RICTORQ6R327 1708 aa19.14■□□□□ 0.65
R3HCC1-205ENST00000519952 DENND4BO75064 1496 aaPredicted RBP19.13■□□□□ 0.65
R3HCC1-205ENST00000519952 PHF23Q9BUL5 403 aaPredicted RBP19.12■□□□□ 0.65
R3HCC1-205ENST00000519952 SETD1BQ9UPS6 1966 aaKnown RBP19.1■□□□□ 0.65
R3HCC1-205ENST00000519952 ZFYVE16Q7Z3T8 1539 aa19.1■□□□□ 0.65
R3HCC1-205ENST00000519952 ARHGAP35Q9NRY4 1499 aa19.09■□□□□ 0.65
R3HCC1-205ENST00000519952 VPS8Q8N3P4 1428 aa19.09■□□□□ 0.65
R3HCC1-205ENST00000519952 EFCAB5A4FU69 1503 aa19.09■□□□□ 0.65
R3HCC1-205ENST00000519952 ATP10BO94823 1461 aa19.08■□□□□ 0.64
R3HCC1-205ENST00000519952 SAMD9Q5K651 1589 aa19.07■□□□□ 0.64
R3HCC1-205ENST00000519952 APLP2Q06481 763 aa19.07■□□□□ 0.64
R3HCC1-205ENST00000519952 FHOD3Q2V2M9 1422 aa19.07■□□□□ 0.64
R3HCC1-205ENST00000519952 ARHGEF12Q9NZN5 1544 aa19.05■□□□□ 0.64
R3HCC1-205ENST00000519952 HSPA1LP34931 641 aa19.05■□□□□ 0.64
R3HCC1-205ENST00000519952 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
R3HCC1-205ENST00000519952 ZMYM4Q5VZL5 1548 aa19.02■□□□□ 0.64
R3HCC1-205ENST00000519952 ZNF335Q9H4Z2 1342 aaPredicted RBP19■□□□□ 0.63
R3HCC1-205ENST00000519952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.99■□□□□ 0.63
R3HCC1-205ENST00000519952 HNRNPUL2Q1KMD3 747 aaKnown RBP18.99■□□□□ 0.63
R3HCC1-205ENST00000519952 PIP4K2BP78356 416 aa18.98■□□□□ 0.63
R3HCC1-205ENST00000519952 MAGI2Q86UL8 1455 aa18.97■□□□□ 0.63
R3HCC1-205ENST00000519952 NCOA1Q15788 1441 aa18.97■□□□□ 0.63
R3HCC1-205ENST00000519952 FMN1Q68DA7 1419 aa18.96■□□□□ 0.63
R3HCC1-205ENST00000519952 HECW1Q76N89 1606 aa18.96■□□□□ 0.63
R3HCC1-205ENST00000519952 CFAP74Q9C0B2 1584 aa18.95■□□□□ 0.62
R3HCC1-205ENST00000519952 TRIM26Q12899 539 aaPredicted RBP18.94■□□□□ 0.62
R3HCC1-205ENST00000519952 PPARGC1BQ86YN6 1023 aaKnown RBP18.94■□□□□ 0.62
R3HCC1-205ENST00000519952 C9orf84Q5VXU9 1444 aa18.91■□□□□ 0.62
R3HCC1-205ENST00000519952 ATP10AO60312 1499 aa18.91■□□□□ 0.62
R3HCC1-205ENST00000519952 ATP1B4Q9UN42 357 aaPredicted RBP18.91■□□□□ 0.62
R3HCC1-205ENST00000519952 C3P01024 1663 aa18.89■□□□□ 0.61
R3HCC1-205ENST00000519952 NCKAP5LQ9HCH0 1330 aa18.88■□□□□ 0.61
R3HCC1-205ENST00000519952 CAMSAP1Q5T5Y3 1602 aa18.87■□□□□ 0.61
R3HCC1-205ENST00000519952 PCGF6Q9BYE7 350 aa18.86■□□□□ 0.61
R3HCC1-205ENST00000519952 TRAPPC8Q9Y2L5 1435 aa18.85■□□□□ 0.61
R3HCC1-205ENST00000519952 CASKIN1Q8WXD9 1431 aa18.84■□□□□ 0.61
R3HCC1-205ENST00000519952 TOM1O60784 492 aa18.84■□□□□ 0.61
R3HCC1-205ENST00000519952 RAPGEF6Q8TEU7 1601 aa18.84■□□□□ 0.61
R3HCC1-205ENST00000519952 FYCO1Q9BQS8 1478 aa18.83■□□□□ 0.6
R3HCC1-205ENST00000519952 SCAPERQ9BY12 1400 aa18.82■□□□□ 0.6
R3HCC1-205ENST00000519952 ESF1Q9H501 851 aaKnown RBP18.81■□□□□ 0.6
R3HCC1-205ENST00000519952 MAP3K1Q13233 1512 aa18.8■□□□□ 0.6
R3HCC1-205ENST00000519952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.6
R3HCC1-205ENST00000519952 NUP153P49790 1475 aaKnown RBP18.79■□□□□ 0.6
R3HCC1-205ENST00000519952 SENP3Q9H4L4 574 aaPredicted RBP18.79■□□□□ 0.6
R3HCC1-205ENST00000519952 PLEKHD1A6NEE1 506 aa18.78■□□□□ 0.6
R3HCC1-205ENST00000519952 RGS17Q9UGC6 210 aaPredicted RBP18.77■□□□□ 0.6
R3HCC1-205ENST00000519952 CDK11AQ9UQ88 783 aaPredicted RBP18.77■□□□□ 0.6
R3HCC1-205ENST00000519952 TIAM1Q13009 1591 aa18.76■□□□□ 0.59
R3HCC1-205ENST00000519952 MYT1LQ9UL68 1186 aa18.74■□□□□ 0.59
R3HCC1-205ENST00000519952 PKD2Q13563 968 aa18.73■□□□□ 0.59
R3HCC1-205ENST00000519952 KANK4Q5T7N3 995 aaPredicted RBP18.73■□□□□ 0.59
R3HCC1-205ENST00000519952 PPP6R1Q9UPN7 881 aa18.72■□□□□ 0.59
R3HCC1-205ENST00000519952 CCDC18Q5T9S5 1454 aa18.71■□□□□ 0.59
R3HCC1-205ENST00000519952 CDK13Q14004 1512 aaKnown RBP18.7■□□□□ 0.58
R3HCC1-205ENST00000519952 SUPT6HQ7KZ85 1726 aaKnown RBP18.7■□□□□ 0.58
R3HCC1-205ENST00000519952 LRRC9Q6ZRR7 1453 aa18.68■□□□□ 0.58
R3HCC1-205ENST00000519952 SRCAPQ6ZRS2 3230 aa18.67■□□□□ 0.58
R3HCC1-205ENST00000519952 PLA2R1Q13018 1463 aa18.65■□□□□ 0.58
R3HCC1-205ENST00000519952 LRRIQ1Q96JM4 1722 aa18.65■□□□□ 0.58
R3HCC1-205ENST00000519952 PLCH2O75038 1416 aa18.65■□□□□ 0.58
R3HCC1-205ENST00000519952 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
R3HCC1-205ENST00000519952 CPS1P31327 1500 aa18.64■□□□□ 0.58
R3HCC1-205ENST00000519952 DIP2CQ9Y2E4 1556 aa18.64■□□□□ 0.58
R3HCC1-205ENST00000519952 AFAP1Q8N556 730 aa18.64■□□□□ 0.57
R3HCC1-205ENST00000519952 NPATQ14207 1427 aa18.64■□□□□ 0.57
R3HCC1-205ENST00000519952 PTPRKQ15262 1439 aa18.64■□□□□ 0.57
R3HCC1-205ENST00000519952 POTEAQ6S8J7 498 aa18.63■□□□□ 0.57
R3HCC1-205ENST00000519952 CNTLNQ9NXG0 1405 aa18.63■□□□□ 0.57
R3HCC1-205ENST00000519952 ZNF518AQ6AHZ1 1483 aa18.63■□□□□ 0.57
R3HCC1-205ENST00000519952 MTUS2Q5JR59 1369 aa18.62■□□□□ 0.57
R3HCC1-205ENST00000519952 REREQ9P2R6 1566 aa18.61■□□□□ 0.57
R3HCC1-205ENST00000519952 AGLP35573 1532 aa18.61■□□□□ 0.57
R3HCC1-205ENST00000519952 SETD1AO15047 1707 aaKnown RBP18.6■□□□□ 0.57
R3HCC1-205ENST00000519952 ALKQ9UM73 1620 aa18.6■□□□□ 0.57
R3HCC1-205ENST00000519952 EFCAB2Q5VUJ9 269 aa18.6■□□□□ 0.57
R3HCC1-205ENST00000519952 ZNF142P52746 1687 aaPredicted RBP18.6■□□□□ 0.57
R3HCC1-205ENST00000519952 TROQ12816 1431 aaPredicted RBP18.59■□□□□ 0.57
R3HCC1-205ENST00000519952 SHANK2Q9UPX8 1470 aa18.58■□□□□ 0.57
R3HCC1-205ENST00000519952 ABCA6Q8N139 1617 aa18.58■□□□□ 0.56
R3HCC1-205ENST00000519952 MYO3AQ8NEV4 1616 aa18.58■□□□□ 0.56
R3HCC1-205ENST00000519952 KDM5CP41229 1560 aa18.58■□□□□ 0.56
R3HCC1-205ENST00000519952 CEP170BQ9Y4F5 1589 aaPredicted RBP18.57■□□□□ 0.56
R3HCC1-205ENST00000519952 ZMYM3Q14202 1370 aa18.56■□□□□ 0.56
R3HCC1-205ENST00000519952 EHBP1L1Q8N3D4 1523 aa18.56■□□□□ 0.56
R3HCC1-205ENST00000519952 MROH2AA6NES4 1674 aa18.55■□□□□ 0.56
R3HCC1-205ENST00000519952 MYO5CQ9NQX4 1742 aa18.54■□□□□ 0.56
R3HCC1-205ENST00000519952 RRBP1Q9P2E9 1410 aaKnown RBP18.49■□□□□ 0.55
R3HCC1-205ENST00000519952 MLH3Q9UHC1 1453 aa18.48■□□□□ 0.55
R3HCC1-205ENST00000519952 POLR1AO95602 1720 aaPredicted RBP18.48■□□□□ 0.55
R3HCC1-205ENST00000519952 KIF14Q15058 1648 aa18.48■□□□□ 0.55
R3HCC1-205ENST00000519952 CCNB3Q8WWL7 1395 aa18.47■□□□□ 0.55
R3HCC1-205ENST00000519952 NCOA2Q15596 1464 aa18.46■□□□□ 0.55
R3HCC1-205ENST00000519952 ARHGAP5Q13017 1502 aa18.46■□□□□ 0.55
R3HCC1-205ENST00000519952 UPF1Q92900 1129 aaKnown RBP eCLIP18.46■□□□□ 0.555e-8■■■■■ 31.3
R3HCC1-205ENST00000519952 CLTCQ00610 1675 aaKnown RBP18.45■□□□□ 0.54
R3HCC1-205ENST00000519952 VWDEQ8N2E2 1590 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms