RNA–Protein interactions for RNA: ENST00000519886.5

EXTL3-206, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 3

Gene EXTL3, Length 803 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-206ENST00000519886 UHRF1BP1Q6BDS2 1440 aa16.86■□□□□ 0.29
EXTL3-206ENST00000519886 NUP153P49790 1475 aaKnown RBP16.83■□□□□ 0.28
EXTL3-206ENST00000519886 IQSEC2Q5JU85 1478 aa16.83■□□□□ 0.28
EXTL3-206ENST00000519886 MAGI2Q86UL8 1455 aa16.83■□□□□ 0.28
EXTL3-206ENST00000519886 RAPGEF6Q8TEU7 1601 aa16.83■□□□□ 0.28
EXTL3-206ENST00000519886 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.81■□□□□ 0.28
EXTL3-206ENST00000519886 ATP10AO60312 1499 aa16.79■□□□□ 0.28
EXTL3-206ENST00000519886 PRXQ9BXM0 1461 aa16.79■□□□□ 0.28
EXTL3-206ENST00000519886 C9orf84Q5VXU9 1444 aa16.79■□□□□ 0.28
EXTL3-206ENST00000519886 CFAP74Q9C0B2 1584 aa16.78■□□□□ 0.28
EXTL3-206ENST00000519886 FAM9AQ8IZU1 332 aaPredicted RBP16.78■□□□□ 0.28
EXTL3-206ENST00000519886 SCAPERQ9BY12 1400 aa16.78■□□□□ 0.28
EXTL3-206ENST00000519886 UBAP1LF5GYI3 381 aa16.77■□□□□ 0.28
EXTL3-206ENST00000519886 PLEKHD1A6NEE1 506 aa16.75■□□□□ 0.27
EXTL3-206ENST00000519886 ZNF335Q9H4Z2 1342 aaPredicted RBP16.74■□□□□ 0.27
EXTL3-206ENST00000519886 SAMD9Q5K651 1589 aa16.74■□□□□ 0.27
EXTL3-206ENST00000519886 NCOA1Q15788 1441 aa16.74■□□□□ 0.27
EXTL3-206ENST00000519886 MED1Q15648 1581 aaPredicted RBP16.73■□□□□ 0.27
EXTL3-206ENST00000519886 SETD1BQ9UPS6 1966 aaKnown RBP16.7■□□□□ 0.26
EXTL3-206ENST00000519886 C3P01024 1663 aa16.7■□□□□ 0.26
EXTL3-206ENST00000519886 HSPA1LP34931 641 aa16.69■□□□□ 0.26
EXTL3-206ENST00000519886 PLCH2O75038 1416 aa16.68■□□□□ 0.26
EXTL3-206ENST00000519886 TRAPPC8Q9Y2L5 1435 aa16.67■□□□□ 0.26
EXTL3-206ENST00000519886 NCKAP5LQ9HCH0 1330 aa16.67■□□□□ 0.26
EXTL3-206ENST00000519886 RANGAP1P46060 587 aaPredicted RBP16.65■□□□□ 0.26
EXTL3-206ENST00000519886 CAMSAP1Q5T5Y3 1602 aa16.65■□□□□ 0.26
EXTL3-206ENST00000519886 AFAP1Q8N556 730 aa16.64■□□□□ 0.25
EXTL3-206ENST00000519886 DIP2CQ9Y2E4 1556 aa16.61■□□□□ 0.25
EXTL3-206ENST00000519886 CDK13Q14004 1512 aaKnown RBP16.6■□□□□ 0.25
EXTL3-206ENST00000519886 PIP4K2BP78356 416 aa16.6■□□□□ 0.25
EXTL3-206ENST00000519886 SCAF1Q9H7N4 1312 aaKnown RBP16.6■□□□□ 0.25
EXTL3-206ENST00000519886 KDM5CP41229 1560 aa16.59■□□□□ 0.25
EXTL3-206ENST00000519886 EFCAB2Q5VUJ9 269 aa16.58■□□□□ 0.24
EXTL3-206ENST00000519886 ZNF518AQ6AHZ1 1483 aa16.58■□□□□ 0.24
EXTL3-206ENST00000519886 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
EXTL3-206ENST00000519886 MYT1LQ9UL68 1186 aa16.57■□□□□ 0.24
EXTL3-206ENST00000519886 ABCA6Q8N139 1617 aa16.56■□□□□ 0.24
EXTL3-206ENST00000519886 REREQ9P2R6 1566 aa16.56■□□□□ 0.24
EXTL3-206ENST00000519886 ESF1Q9H501 851 aaKnown RBP16.55■□□□□ 0.24
EXTL3-206ENST00000519886 AGLP35573 1532 aa16.54■□□□□ 0.24
EXTL3-206ENST00000519886 TCOF1Q13428 1488 aaKnown RBP16.51■□□□□ 0.23
EXTL3-206ENST00000519886 NPATQ14207 1427 aa16.51■□□□□ 0.23
EXTL3-206ENST00000519886 MYO5CQ9NQX4 1742 aa16.5■□□□□ 0.23
EXTL3-206ENST00000519886 MLH3Q9UHC1 1453 aa16.5■□□□□ 0.23
EXTL3-206ENST00000519886 PKD2Q13563 968 aa16.5■□□□□ 0.23
EXTL3-206ENST00000519886 CNTLNQ9NXG0 1405 aa16.5■□□□□ 0.23
EXTL3-206ENST00000519886 PLA2R1Q13018 1463 aa16.49■□□□□ 0.23
EXTL3-206ENST00000519886 KIF14Q15058 1648 aa16.49■□□□□ 0.23
EXTL3-206ENST00000519886 PPP6R1Q9UPN7 881 aa16.49■□□□□ 0.23
EXTL3-206ENST00000519886 ZMYM3Q14202 1370 aa16.49■□□□□ 0.23
EXTL3-206ENST00000519886 TOM1O60784 492 aa16.48■□□□□ 0.23
EXTL3-206ENST00000519886 RGS17Q9UGC6 210 aaPredicted RBP16.48■□□□□ 0.23
EXTL3-206ENST00000519886 ARHGAP5Q13017 1502 aa16.48■□□□□ 0.23
EXTL3-206ENST00000519886 SENP3Q9H4L4 574 aaPredicted RBP16.47■□□□□ 0.23
EXTL3-206ENST00000519886 ALKQ9UM73 1620 aa16.46■□□□□ 0.23
EXTL3-206ENST00000519886 MYO3AQ8NEV4 1616 aa16.45■□□□□ 0.22
EXTL3-206ENST00000519886 CEP170BQ9Y4F5 1589 aaPredicted RBP16.44■□□□□ 0.22
EXTL3-206ENST00000519886 CSRNP3Q8WYN3 585 aa16.44■□□□□ 0.22
EXTL3-206ENST00000519886 ZNF142P52746 1687 aaPredicted RBP16.43■□□□□ 0.22
EXTL3-206ENST00000519886 MROH2AA6NES4 1674 aa16.42■□□□□ 0.22
EXTL3-206ENST00000519886 KIDINS220Q9ULH0 1771 aa16.41■□□□□ 0.22
EXTL3-206ENST00000519886 ATP1B4Q9UN42 357 aaPredicted RBP16.41■□□□□ 0.22
EXTL3-206ENST00000519886 PTPRKQ15262 1439 aa16.41■□□□□ 0.22
EXTL3-206ENST00000519886 CPS1P31327 1500 aa16.4■□□□□ 0.22
EXTL3-206ENST00000519886 SHANK2Q9UPX8 1470 aa16.39■□□□□ 0.21
EXTL3-206ENST00000519886 ABCC1P33527 1531 aa16.39■□□□□ 0.21
EXTL3-206ENST00000519886 SUPT6HQ7KZ85 1726 aaKnown RBP16.38■□□□□ 0.21
EXTL3-206ENST00000519886 CDC42BPBQ9Y5S2 1711 aa16.37■□□□□ 0.21
EXTL3-206ENST00000519886 CLTCQ00610 1675 aaKnown RBP16.37■□□□□ 0.21
EXTL3-206ENST00000519886 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
EXTL3-206ENST00000519886 NEURL4Q96JN8 1562 aa16.36■□□□□ 0.21
EXTL3-206ENST00000519886 ITSN2Q9NZM3 1697 aa16.35■□□□□ 0.21
EXTL3-206ENST00000519886 DNMT1P26358 1616 aaKnown RBP16.34■□□□□ 0.21
EXTL3-206ENST00000519886 POTEAQ6S8J7 498 aa16.33■□□□□ 0.2
EXTL3-206ENST00000519886 VWDEQ8N2E2 1590 aa16.33■□□□□ 0.2
EXTL3-206ENST00000519886 A2ML1A8K2U0 1454 aa16.32■□□□□ 0.2
EXTL3-206ENST00000519886 CDK11AQ9UQ88 783 aaPredicted RBP16.32■□□□□ 0.2
EXTL3-206ENST00000519886 SAMD9LQ8IVG5 1584 aa16.3■□□□□ 0.2
EXTL3-206ENST00000519886 PREX2Q70Z35 1606 aa16.3■□□□□ 0.2
EXTL3-206ENST00000519886 GGT6Q6P531 493 aa16.29■□□□□ 0.2
EXTL3-206ENST00000519886 CLIP1P30622 1438 aa16.28■□□□□ 0.2
EXTL3-206ENST00000519886 POLR1AO95602 1720 aaPredicted RBP16.27■□□□□ 0.19
EXTL3-206ENST00000519886 PLXNC1O60486 1568 aa16.26■□□□□ 0.19
EXTL3-206ENST00000519886 LRRIQ1Q96JM4 1722 aa16.25■□□□□ 0.19
EXTL3-206ENST00000519886 FMN1Q68DA7 1419 aa16.25■□□□□ 0.19
EXTL3-206ENST00000519886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.25■□□□□ 0.19
EXTL3-206ENST00000519886 SPAG9O60271 1321 aaKnown RBP16.24■□□□□ 0.19
EXTL3-206ENST00000519886 FBXO31Q5XUX0 539 aaPredicted RBP16.24■□□□□ 0.19
EXTL3-206ENST00000519886 LRRC7Q96NW7 1537 aa16.24■□□□□ 0.19
EXTL3-206ENST00000519886 A2MP01023 1474 aa16.23■□□□□ 0.19
EXTL3-206ENST00000519886 HNRNPMP52272 730 aaKnown RBP eCLIP16.23■□□□□ 0.19
EXTL3-206ENST00000519886 ZNF777Q9ULD5 760 aaPredicted RBP16.23■□□□□ 0.19
EXTL3-206ENST00000519886 SYCP2Q9BX26 1530 aa16.23■□□□□ 0.19
EXTL3-206ENST00000519886 STRCP1A6NGW2 1772 aa16.23■□□□□ 0.19
EXTL3-206ENST00000519886 SETD1AO15047 1707 aaKnown RBP16.22■□□□□ 0.19
EXTL3-206ENST00000519886 ARHGAP35Q9NRY4 1499 aa16.22■□□□□ 0.19
EXTL3-206ENST00000519886 NPHP4O75161 1426 aaPredicted RBP16.21■□□□□ 0.19
EXTL3-206ENST00000519886 ANKLE2Q86XL3 938 aa16.21■□□□□ 0.19
EXTL3-206ENST00000519886 ATP7AQ04656 1500 aa16.2■□□□□ 0.18
EXTL3-206ENST00000519886 TNRQ92752 1358 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms