RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 BCORL1Q5H9F3 1711 aa11.12□□□□□ -0.63
CTNNA1-214ENST00000519116 P3H3Q8IVL6 736 aa11.12□□□□□ -0.63
CTNNA1-214ENST00000519116 AKNAQ7Z591 1439 aa11.11□□□□□ -0.63
CTNNA1-214ENST00000519116 DENND4BO75064 1496 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-214ENST00000519116 CAPN15O75808 1086 aa11.1□□□□□ -0.63
CTNNA1-214ENST00000519116 PRXQ9BXM0 1461 aa11.1□□□□□ -0.63
CTNNA1-214ENST00000519116 FHOD3Q2V2M9 1422 aa11.09□□□□□ -0.63
CTNNA1-214ENST00000519116 ARHGEF40Q8TER5 1519 aa11.09□□□□□ -0.63
CTNNA1-214ENST00000519116 FRMPD1Q5SYB0 1578 aa11.09□□□□□ -0.63
CTNNA1-214ENST00000519116 FANCAO15360 1455 aa11.09□□□□□ -0.63
CTNNA1-214ENST00000519116 PLEKHD1A6NEE1 506 aa11.07□□□□□ -0.64
CTNNA1-214ENST00000519116 MLECQ14165 292 aa11.06□□□□□ -0.64
CTNNA1-214ENST00000519116 CTTNBP2Q8WZ74 1663 aa11.05□□□□□ -0.64
CTNNA1-214ENST00000519116 YEATS2Q9ULM3 1422 aa11.05□□□□□ -0.64
CTNNA1-214ENST00000519116 MAGI2Q86UL8 1455 aa11.05□□□□□ -0.64
CTNNA1-214ENST00000519116 RIMS1Q86UR5 1692 aaKnown RBP11.04□□□□□ -0.64
CTNNA1-214ENST00000519116 ZFYVE16Q7Z3T8 1539 aa11.03□□□□□ -0.64
CTNNA1-214ENST00000519116 NUP153P49790 1475 aaKnown RBP11.02□□□□□ -0.65
CTNNA1-214ENST00000519116 EFCAB5A4FU69 1503 aa11.02□□□□□ -0.65
CTNNA1-214ENST00000519116 ZMYM4Q5VZL5 1548 aa11.02□□□□□ -0.65
CTNNA1-214ENST00000519116 RAPGEF6Q8TEU7 1601 aa11□□□□□ -0.65
CTNNA1-214ENST00000519116 CEBPAP49715 358 aaPredicted RBP10.98□□□□□ -0.65
CTNNA1-214ENST00000519116 UHRF1BP1Q6BDS2 1440 aa10.98□□□□□ -0.65
CTNNA1-214ENST00000519116 SCAPERQ9BY12 1400 aa10.98□□□□□ -0.65
CTNNA1-214ENST00000519116 ATP10AO60312 1499 aa10.98□□□□□ -0.65
CTNNA1-214ENST00000519116 TTC37Q6PGP7 1564 aa10.98□□□□□ -0.65
CTNNA1-214ENST00000519116 CFAP74Q9C0B2 1584 aa10.98□□□□□ -0.65
CTNNA1-214ENST00000519116 PTPRTO14522 1441 aa10.97□□□□□ -0.65
CTNNA1-214ENST00000519116 C9orf84Q5VXU9 1444 aa10.97□□□□□ -0.65
CTNNA1-214ENST00000519116 ARHGEF12Q9NZN5 1544 aa10.97□□□□□ -0.65
CTNNA1-214ENST00000519116 SAMD9Q5K651 1589 aa10.97□□□□□ -0.65
CTNNA1-214ENST00000519116 RICTORQ6R327 1708 aa10.97□□□□□ -0.65
CTNNA1-214ENST00000519116 SPATA31D1Q6ZQQ2 1576 aa10.96□□□□□ -0.65
CTNNA1-214ENST00000519116 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.96□□□□□ -0.65
CTNNA1-214ENST00000519116 CSRNP3Q8WYN3 585 aa10.96□□□□□ -0.65
CTNNA1-214ENST00000519116 PLCH2O75038 1416 aa10.95□□□□□ -0.66
CTNNA1-214ENST00000519116 EFCAB2Q5VUJ9 269 aa10.95□□□□□ -0.66
CTNNA1-214ENST00000519116 HECW1Q76N89 1606 aa10.95□□□□□ -0.66
CTNNA1-214ENST00000519116 RANGAP1P46060 587 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-214ENST00000519116 IQSEC2Q5JU85 1478 aa10.92□□□□□ -0.66
CTNNA1-214ENST00000519116 ESF1Q9H501 851 aaKnown RBP10.91□□□□□ -0.66
CTNNA1-214ENST00000519116 SIGLEC1Q9BZZ2 1709 aa10.91□□□□□ -0.66
CTNNA1-214ENST00000519116 PREX1Q8TCU6 1659 aa10.91□□□□□ -0.66
CTNNA1-214ENST00000519116 FER1L4A9Z1Z3 1794 aa10.9□□□□□ -0.66
CTNNA1-214ENST00000519116 ZNF219Q9P2Y4 722 aaPredicted RBP10.9□□□□□ -0.66
CTNNA1-214ENST00000519116 ZNF518AQ6AHZ1 1483 aa10.89□□□□□ -0.67
CTNNA1-214ENST00000519116 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
CTNNA1-214ENST00000519116 CDK11AQ9UQ88 783 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-214ENST00000519116 ABCB7O75027 752 aa10.88□□□□□ -0.67
CTNNA1-214ENST00000519116 APLP2Q06481 763 aa10.88□□□□□ -0.67
CTNNA1-214ENST00000519116 AFAP1Q8N556 730 aa10.88□□□□□ -0.67
CTNNA1-214ENST00000519116 TRAPPC8Q9Y2L5 1435 aa10.88□□□□□ -0.67
CTNNA1-214ENST00000519116 LTBP4Q8N2S1 1624 aa10.87□□□□□ -0.67
CTNNA1-214ENST00000519116 NCOA1Q15788 1441 aa10.87□□□□□ -0.67
CTNNA1-214ENST00000519116 STRCQ7RTU9 1775 aa10.86□□□□□ -0.67
CTNNA1-214ENST00000519116 UBAP1LF5GYI3 381 aa10.86□□□□□ -0.67
CTNNA1-214ENST00000519116 SAMD1Q6SPF0 538 aaPredicted RBP10.86□□□□□ -0.67
CTNNA1-214ENST00000519116 CDK13Q14004 1512 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-214ENST00000519116 CNTLNQ9NXG0 1405 aa10.84□□□□□ -0.67
CTNNA1-214ENST00000519116 ATP1B4Q9UN42 357 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-214ENST00000519116 EEA1Q15075 1411 aa10.84□□□□□ -0.67
CTNNA1-214ENST00000519116 KDM5CP41229 1560 aa10.82□□□□□ -0.68
CTNNA1-214ENST00000519116 REREQ9P2R6 1566 aa10.82□□□□□ -0.68
CTNNA1-214ENST00000519116 MLH3Q9UHC1 1453 aa10.82□□□□□ -0.68
CTNNA1-214ENST00000519116 AGLP35573 1532 aa10.82□□□□□ -0.68
CTNNA1-214ENST00000519116 NPATQ14207 1427 aa10.82□□□□□ -0.68
CTNNA1-214ENST00000519116 ZNF335Q9H4Z2 1342 aaPredicted RBP10.82□□□□□ -0.68
CTNNA1-214ENST00000519116 ARHGAP5Q13017 1502 aa10.81□□□□□ -0.68
CTNNA1-214ENST00000519116 PKD2Q13563 968 aa10.81□□□□□ -0.68
CTNNA1-214ENST00000519116 FMN1Q68DA7 1419 aa10.81□□□□□ -0.68
CTNNA1-214ENST00000519116 NCKAP5LQ9HCH0 1330 aa10.81□□□□□ -0.68
CTNNA1-214ENST00000519116 CLIP1P30622 1438 aa10.8□□□□□ -0.68
CTNNA1-214ENST00000519116 TROQ12816 1431 aaPredicted RBP10.8□□□□□ -0.68
CTNNA1-214ENST00000519116 DIP2CQ9Y2E4 1556 aa10.8□□□□□ -0.68
CTNNA1-214ENST00000519116 POTEHQ6S545 545 aa10.79□□□□□ -0.68
CTNNA1-214ENST00000519116 SETD1BQ9UPS6 1966 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-214ENST00000519116 ZMYM3Q14202 1370 aa10.77□□□□□ -0.68
CTNNA1-214ENST00000519116 CAMSAP1Q5T5Y3 1602 aa10.77□□□□□ -0.68
CTNNA1-214ENST00000519116 MYCNP04198 464 aaPredicted RBP10.76□□□□□ -0.69
CTNNA1-214ENST00000519116 HSPA1LP34931 641 aa10.76□□□□□ -0.69
CTNNA1-214ENST00000519116 KIF14Q15058 1648 aa10.76□□□□□ -0.69
CTNNA1-214ENST00000519116 C3P01024 1663 aa10.76□□□□□ -0.69
CTNNA1-214ENST00000519116 PLA2R1Q13018 1463 aa10.75□□□□□ -0.69
CTNNA1-214ENST00000519116 ABCA6Q8N139 1617 aa10.74□□□□□ -0.69
CTNNA1-214ENST00000519116 TOM1O60784 492 aa10.74□□□□□ -0.69
CTNNA1-214ENST00000519116 MYO5CQ9NQX4 1742 aa10.73□□□□□ -0.69
CTNNA1-214ENST00000519116 UBTFP17480 764 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-214ENST00000519116 PIP4K2BP78356 416 aa10.73□□□□□ -0.69
CTNNA1-214ENST00000519116 TCOF1Q13428 1488 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-214ENST00000519116 ABCC1P33527 1531 aa10.72□□□□□ -0.69
CTNNA1-214ENST00000519116 SPAG9O60271 1321 aaKnown RBP10.71□□□□□ -0.69
CTNNA1-214ENST00000519116 MED1Q15648 1581 aaPredicted RBP10.7□□□□□ -0.7
CTNNA1-214ENST00000519116 ARHGAP35Q9NRY4 1499 aa10.7□□□□□ -0.7
CTNNA1-214ENST00000519116 PTPRKQ15262 1439 aa10.7□□□□□ -0.7
CTNNA1-214ENST00000519116 GGT6Q6P531 493 aa10.68□□□□□ -0.7
CTNNA1-214ENST00000519116 SLC4A1APQ9BWU0 796 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-214ENST00000519116 ZNF777Q9ULD5 760 aaPredicted RBP10.68□□□□□ -0.7
CTNNA1-214ENST00000519116 CEP170BQ9Y4F5 1589 aaPredicted RBP10.67□□□□□ -0.7
CTNNA1-214ENST00000519116 CPS1P31327 1500 aa10.67□□□□□ -0.7
CTNNA1-214ENST00000519116 HNRNPMP52272 730 aaKnown RBP eCLIP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms