RNA–Protein interactions for RNA: ENST00000519094.5

POLB-205, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-205ENST00000519094 CFAP74Q9C0B2 1584 aa17.27■□□□□ 0.35
POLB-205ENST00000519094 HECW1Q76N89 1606 aa17.26■□□□□ 0.35
POLB-205ENST00000519094 UBAP1LF5GYI3 381 aa17.25■□□□□ 0.35
POLB-205ENST00000519094 FAM9AQ8IZU1 332 aaPredicted RBP17.23■□□□□ 0.35
POLB-205ENST00000519094 ATP10AO60312 1499 aa17.21■□□□□ 0.35
POLB-205ENST00000519094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
POLB-205ENST00000519094 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
POLB-205ENST00000519094 P3H3Q8IVL6 736 aa17.2■□□□□ 0.34
POLB-205ENST00000519094 RAPGEF6Q8TEU7 1601 aa17.2■□□□□ 0.34
POLB-205ENST00000519094 NCOA1Q15788 1441 aa17.2■□□□□ 0.34
POLB-205ENST00000519094 C9orf84Q5VXU9 1444 aa17.19■□□□□ 0.34
POLB-205ENST00000519094 C3P01024 1663 aa17.16■□□□□ 0.34
POLB-205ENST00000519094 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.16■□□□□ 0.34
POLB-205ENST00000519094 NUP153P49790 1475 aaKnown RBP17.15■□□□□ 0.34
POLB-205ENST00000519094 ZNF335Q9H4Z2 1342 aaPredicted RBP17.15■□□□□ 0.34
POLB-205ENST00000519094 HSPA1LP34931 641 aa17.14■□□□□ 0.33
POLB-205ENST00000519094 SCAPERQ9BY12 1400 aa17.13■□□□□ 0.33
POLB-205ENST00000519094 PLEKHD1A6NEE1 506 aa17.12■□□□□ 0.33
POLB-205ENST00000519094 TRAPPC8Q9Y2L5 1435 aa17.12■□□□□ 0.33
POLB-205ENST00000519094 CAMSAP1Q5T5Y3 1602 aa17.1■□□□□ 0.33
POLB-205ENST00000519094 SAMD9Q5K651 1589 aa17.09■□□□□ 0.33
POLB-205ENST00000519094 PHF23Q9BUL5 403 aaPredicted RBP17.08■□□□□ 0.32
POLB-205ENST00000519094 PRXQ9BXM0 1461 aa17.06■□□□□ 0.32
POLB-205ENST00000519094 NCKAP5LQ9HCH0 1330 aa17.06■□□□□ 0.32
POLB-205ENST00000519094 PLCH2O75038 1416 aa17.04■□□□□ 0.32
POLB-205ENST00000519094 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
POLB-205ENST00000519094 PIP4K2BP78356 416 aa17.03■□□□□ 0.32
POLB-205ENST00000519094 REREQ9P2R6 1566 aa17.02■□□□□ 0.32
POLB-205ENST00000519094 DIP2CQ9Y2E4 1556 aa17■□□□□ 0.31
POLB-205ENST00000519094 ZNF518AQ6AHZ1 1483 aa16.99■□□□□ 0.31
POLB-205ENST00000519094 KDM5CP41229 1560 aa16.99■□□□□ 0.31
POLB-205ENST00000519094 ESF1Q9H501 851 aaKnown RBP16.99■□□□□ 0.31
POLB-205ENST00000519094 AGLP35573 1532 aa16.99■□□□□ 0.31
POLB-205ENST00000519094 TOM1O60784 492 aa16.98■□□□□ 0.31
POLB-205ENST00000519094 PKD2Q13563 968 aa16.97■□□□□ 0.31
POLB-205ENST00000519094 NPATQ14207 1427 aa16.96■□□□□ 0.31
POLB-205ENST00000519094 EFCAB2Q5VUJ9 269 aa16.96■□□□□ 0.31
POLB-205ENST00000519094 AFAP1Q8N556 730 aa16.96■□□□□ 0.31
POLB-205ENST00000519094 PLA2R1Q13018 1463 aa16.96■□□□□ 0.31
POLB-205ENST00000519094 TCOF1Q13428 1488 aaKnown RBP16.96■□□□□ 0.31
POLB-205ENST00000519094 CNTLNQ9NXG0 1405 aa16.96■□□□□ 0.3
POLB-205ENST00000519094 ABCA6Q8N139 1617 aa16.95■□□□□ 0.3
POLB-205ENST00000519094 MYO5CQ9NQX4 1742 aa16.93■□□□□ 0.3
POLB-205ENST00000519094 RGS17Q9UGC6 210 aaPredicted RBP16.93■□□□□ 0.3
POLB-205ENST00000519094 ZNF142P52746 1687 aaPredicted RBP16.92■□□□□ 0.3
POLB-205ENST00000519094 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
POLB-205ENST00000519094 MROH2AA6NES4 1674 aa16.91■□□□□ 0.3
POLB-205ENST00000519094 SUPT6HQ7KZ85 1726 aaKnown RBP16.91■□□□□ 0.3
POLB-205ENST00000519094 ALKQ9UM73 1620 aa16.9■□□□□ 0.3
POLB-205ENST00000519094 MYT1LQ9UL68 1186 aa16.9■□□□□ 0.3
POLB-205ENST00000519094 MLH3Q9UHC1 1453 aa16.9■□□□□ 0.3
POLB-205ENST00000519094 CPS1P31327 1500 aa16.89■□□□□ 0.29
POLB-205ENST00000519094 CDK13Q14004 1512 aaKnown RBP16.88■□□□□ 0.29
POLB-205ENST00000519094 MYO3AQ8NEV4 1616 aa16.88■□□□□ 0.29
POLB-205ENST00000519094 ZMYM3Q14202 1370 aa16.88■□□□□ 0.29
POLB-205ENST00000519094 SRCAPQ6ZRS2 3230 aa16.87■□□□□ 0.29
POLB-205ENST00000519094 CEP170BQ9Y4F5 1589 aaPredicted RBP16.87■□□□□ 0.29
POLB-205ENST00000519094 PTPRKQ15262 1439 aa16.85■□□□□ 0.29
POLB-205ENST00000519094 SHANK2Q9UPX8 1470 aa16.85■□□□□ 0.29
POLB-205ENST00000519094 ARHGAP5Q13017 1502 aa16.82■□□□□ 0.28
POLB-205ENST00000519094 KIDINS220Q9ULH0 1771 aa16.81■□□□□ 0.28
POLB-205ENST00000519094 RANGAP1P46060 587 aaPredicted RBP16.8■□□□□ 0.28
POLB-205ENST00000519094 KIF14Q15058 1648 aa16.8■□□□□ 0.28
POLB-205ENST00000519094 NEURL4Q96JN8 1562 aa16.78■□□□□ 0.28
POLB-205ENST00000519094 SENP3Q9H4L4 574 aaPredicted RBP16.78■□□□□ 0.28
POLB-205ENST00000519094 CLTCQ00610 1675 aaKnown RBP16.78■□□□□ 0.28
POLB-205ENST00000519094 POLR1AO95602 1720 aaPredicted RBP16.77■□□□□ 0.28
POLB-205ENST00000519094 POTEAQ6S8J7 498 aa16.77■□□□□ 0.28
POLB-205ENST00000519094 DNMT1P26358 1616 aaKnown RBP16.76■□□□□ 0.27
POLB-205ENST00000519094 VWDEQ8N2E2 1590 aa16.76■□□□□ 0.27
POLB-205ENST00000519094 CDC42BPBQ9Y5S2 1711 aa16.76■□□□□ 0.27
POLB-205ENST00000519094 ABCC1P33527 1531 aa16.74■□□□□ 0.27
POLB-205ENST00000519094 A2ML1A8K2U0 1454 aa16.73■□□□□ 0.27
POLB-205ENST00000519094 ITSN2Q9NZM3 1697 aa16.73■□□□□ 0.27
POLB-205ENST00000519094 SETD1AO15047 1707 aaKnown RBP16.71■□□□□ 0.27
POLB-205ENST00000519094 CDK11AQ9UQ88 783 aaPredicted RBP16.69■□□□□ 0.26
POLB-205ENST00000519094 TROQ12816 1431 aaPredicted RBP16.69■□□□□ 0.26
POLB-205ENST00000519094 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
POLB-205ENST00000519094 RNF17Q9BXT8 1623 aaKnown RBP16.67■□□□□ 0.26
POLB-205ENST00000519094 PREX2Q70Z35 1606 aa16.67■□□□□ 0.26
POLB-205ENST00000519094 STRCP1A6NGW2 1772 aa16.66■□□□□ 0.26
POLB-205ENST00000519094 LRRC7Q96NW7 1537 aa16.66■□□□□ 0.26
POLB-205ENST00000519094 SAMD9LQ8IVG5 1584 aa16.66■□□□□ 0.26
POLB-205ENST00000519094 PLXNC1O60486 1568 aa16.64■□□□□ 0.25
POLB-205ENST00000519094 ATP1B4Q9UN42 357 aaPredicted RBP16.64■□□□□ 0.25
POLB-205ENST00000519094 CLIP1P30622 1438 aa16.63■□□□□ 0.25
POLB-205ENST00000519094 MED14O60244 1454 aa16.63■□□□□ 0.25
POLB-205ENST00000519094 ANKLE2Q86XL3 938 aa16.63■□□□□ 0.25
POLB-205ENST00000519094 GGT6Q6P531 493 aa16.62■□□□□ 0.25
POLB-205ENST00000519094 DEPDC5O75140 1603 aa16.61■□□□□ 0.25
POLB-205ENST00000519094 NPHP4O75161 1426 aaPredicted RBP16.61■□□□□ 0.25
POLB-205ENST00000519094 SYNMO15061 1565 aa16.6■□□□□ 0.25
POLB-205ENST00000519094 UPF1Q92900 1129 aaKnown RBP eCLIP16.6■□□□□ 0.25
POLB-205ENST00000519094 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.6■□□□□ 0.25
POLB-205ENST00000519094 SPAG9O60271 1321 aaKnown RBP16.59■□□□□ 0.25
POLB-205ENST00000519094 A2MP01023 1474 aa16.59■□□□□ 0.25
POLB-205ENST00000519094 IQGAP1P46940 1657 aa16.57■□□□□ 0.24
POLB-205ENST00000519094 TNRQ92752 1358 aa16.57■□□□□ 0.24
POLB-205ENST00000519094 LRRIQ1Q96JM4 1722 aa16.56■□□□□ 0.24
POLB-205ENST00000519094 ATP7AQ04656 1500 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms