RNA–Protein interactions for RNA: ENST00000515869.1

ERCC6-208, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2 BASIC

Gene ERCC6, Length 3,439 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-208ENST00000515869 RIMBP3Q9UFD9 1639 aa11.86□□□□□ -0.51
ERCC6-208ENST00000515869 NAIPQ13075 1403 aa11.86□□□□□ -0.51
ERCC6-208ENST00000515869 PLPPR3Q6T4P5 718 aa11.86□□□□□ -0.51
ERCC6-208ENST00000515869 CFDP1Q9UEE9 299 aaPredicted RBP11.86□□□□□ -0.51
ERCC6-208ENST00000515869 NOP58Q9Y2X3 529 aaKnown RBP11.86□□□□□ -0.51
ERCC6-208ENST00000515869 CFAP43Q8NDM7 1665 aa11.86□□□□□ -0.51
ERCC6-208ENST00000515869 EIF4G3O43432 1585 aaKnown RBP11.86□□□□□ -0.51
ERCC6-208ENST00000515869 FMN1Q68DA7 1419 aa11.85□□□□□ -0.51
ERCC6-208ENST00000515869 PLEKHD1A6NEE1 506 aa11.85□□□□□ -0.51
ERCC6-208ENST00000515869 PAK3O75914 559 aaPredicted RBP11.84□□□□□ -0.51
ERCC6-208ENST00000515869 ARHGEF11O15085 1522 aa11.84□□□□□ -0.51
ERCC6-208ENST00000515869 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
ERCC6-208ENST00000515869 CCDC136Q96JN2 1154 aa11.83□□□□□ -0.52
ERCC6-208ENST00000515869 MPHOSPH9Q99550 1183 aa11.83□□□□□ -0.52
ERCC6-208ENST00000515869 ZBED9Q6R2W3 1325 aa11.83□□□□□ -0.52
ERCC6-208ENST00000515869 CNTLNQ9NXG0 1405 aa11.83□□□□□ -0.52
ERCC6-208ENST00000515869 PTPN23Q9H3S7 1636 aa11.82□□□□□ -0.52
ERCC6-208ENST00000515869 ABCA10Q8WWZ4 1543 aa11.82□□□□□ -0.52
ERCC6-208ENST00000515869 KDM2AQ9Y2K7 1162 aa11.82□□□□□ -0.52
ERCC6-208ENST00000515869 NCOA2Q15596 1464 aa11.81□□□□□ -0.52
ERCC6-208ENST00000515869 CCDC7Q96M83 1385 aa11.81□□□□□ -0.52
ERCC6-208ENST00000515869 MYOM3Q5VTT5 1437 aa11.81□□□□□ -0.52
ERCC6-208ENST00000515869 TARBP1Q13395 1621 aaKnown RBP11.81□□□□□ -0.52
ERCC6-208ENST00000515869 HNRNPMP52272 730 aaKnown RBP eCLIP11.8□□□□□ -0.52
ERCC6-208ENST00000515869 ANP32AP39687 249 aaKnown RBP11.8□□□□□ -0.52
ERCC6-208ENST00000515869 TRHP20396 242 aaPredicted RBP11.79□□□□□ -0.52
ERCC6-208ENST00000515869 NBPF8Q3BBV2 869 aa11.79□□□□□ -0.52
ERCC6-208ENST00000515869 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
ERCC6-208ENST00000515869 CHD1O14646 1710 aa11.78□□□□□ -0.52
ERCC6-208ENST00000515869 AKNAQ7Z591 1439 aa11.77□□□□□ -0.52
ERCC6-208ENST00000515869 EFCAB5A4FU69 1503 aa11.77□□□□□ -0.53
ERCC6-208ENST00000515869 KIF7Q2M1P5 1343 aa11.77□□□□□ -0.53
ERCC6-208ENST00000515869 RGL3Q3MIN7 710 aa11.77□□□□□ -0.53
ERCC6-208ENST00000515869 NPM2Q86SE8 214 aaKnown RBP11.77□□□□□ -0.53
ERCC6-208ENST00000515869 SLC4A1APQ9BWU0 796 aaKnown RBP11.77□□□□□ -0.53
ERCC6-208ENST00000515869 ZBTB47Q9UFB7 747 aaPredicted RBP11.77□□□□□ -0.53
ERCC6-208ENST00000515869 KDM5BQ9UGL1 1544 aa11.76□□□□□ -0.53
ERCC6-208ENST00000515869 GRIN2BQ13224 1484 aa11.76□□□□□ -0.53
ERCC6-208ENST00000515869 EIF5BO60841 1220 aaKnown RBP11.76□□□□□ -0.53
ERCC6-208ENST00000515869 NCOA1Q15788 1441 aa11.74□□□□□ -0.53
ERCC6-208ENST00000515869 SALL2Q9Y467 1007 aaPredicted RBP11.74□□□□□ -0.53
ERCC6-208ENST00000515869 CDK13Q14004 1512 aaKnown RBP11.74□□□□□ -0.53
ERCC6-208ENST00000515869 TSPY4P0CV99 314 aa11.73□□□□□ -0.53
ERCC6-208ENST00000515869 TSPY10P0CW01 314 aa11.73□□□□□ -0.53
ERCC6-208ENST00000515869 NUDCQ9Y266 331 aa11.73□□□□□ -0.53
ERCC6-208ENST00000515869 IPO9Q96P70 1041 aaKnown RBP11.73□□□□□ -0.53
ERCC6-208ENST00000515869 TMC1Q8TDI8 760 aa11.72□□□□□ -0.53
ERCC6-208ENST00000515869 NPM1P06748 294 aaKnown RBP eCLIP11.71□□□□□ -0.54
ERCC6-208ENST00000515869 PRG4Q92954 1404 aaPredicted RBP11.7□□□□□ -0.54
ERCC6-208ENST00000515869 CHGAP10645 457 aaKnown RBP11.7□□□□□ -0.54
ERCC6-208ENST00000515869 PLB1Q6P1J6 1458 aa11.7□□□□□ -0.54
ERCC6-208ENST00000515869 DENND4BO75064 1496 aaPredicted RBP11.7□□□□□ -0.54
ERCC6-208ENST00000515869 PTPRGP23470 1445 aa11.68□□□□□ -0.54
ERCC6-208ENST00000515869 SUPT6HQ7KZ85 1726 aaKnown RBP11.68□□□□□ -0.54
ERCC6-208ENST00000515869 MAGI1Q96QZ7 1491 aaPredicted RBP11.67□□□□□ -0.54
ERCC6-208ENST00000515869 SMG6Q86US8 1419 aaKnown RBP11.67□□□□□ -0.54
ERCC6-208ENST00000515869 LAS1LQ9Y4W2 734 aaKnown RBP11.67□□□□□ -0.54
ERCC6-208ENST00000515869 KDM6BO15054 1643 aa11.67□□□□□ -0.54
ERCC6-208ENST00000515869 RTN4Q9NQC3 1192 aaKnown RBP11.66□□□□□ -0.54
ERCC6-208ENST00000515869 EHBP1L1Q8N3D4 1523 aa11.66□□□□□ -0.54
ERCC6-208ENST00000515869 CARMIL2Q6F5E8 1435 aa11.66□□□□□ -0.54
ERCC6-208ENST00000515869 ANKRD30BQ9BXX2 1392 aa11.66□□□□□ -0.54
ERCC6-208ENST00000515869 SYNJ2O15056 1496 aa11.65□□□□□ -0.54
ERCC6-208ENST00000515869 UGGT2Q9NYU1 1516 aa11.64□□□□□ -0.55
ERCC6-208ENST00000515869 CTTNBP2Q8WZ74 1663 aa11.64□□□□□ -0.55
ERCC6-208ENST00000515869 MAGI3Q5TCQ9 1506 aa11.64□□□□□ -0.55
ERCC6-208ENST00000515869 EXOC6Q8TAG9 804 aa11.63□□□□□ -0.55
ERCC6-208ENST00000515869 PNISRQ8TF01 805 aaKnown RBP11.63□□□□□ -0.55
ERCC6-208ENST00000515869 CUL7Q14999 1698 aa11.62□□□□□ -0.55
ERCC6-208ENST00000515869 GRIN2AQ12879 1464 aa11.62□□□□□ -0.55
ERCC6-208ENST00000515869 USP47Q96K76 1375 aa11.62□□□□□ -0.55
ERCC6-208ENST00000515869 CLASP1Q7Z460 1538 aa11.62□□□□□ -0.55
ERCC6-208ENST00000515869 RPRD2Q5VT52 1461 aaKnown RBP11.62□□□□□ -0.55
ERCC6-208ENST00000515869 NEFMP07197 916 aa11.62□□□□□ -0.55
ERCC6-208ENST00000515869 PKD2Q13563 968 aa11.62□□□□□ -0.55
ERCC6-208ENST00000515869 MLECQ14165 292 aa11.61□□□□□ -0.55
ERCC6-208ENST00000515869 IL27Q8NEV9 243 aa11.61□□□□□ -0.55
ERCC6-208ENST00000515869 ANO8Q9HCE9 1232 aaPredicted RBP11.61□□□□□ -0.55
ERCC6-208ENST00000515869 LRRIQ1Q96JM4 1722 aa11.61□□□□□ -0.55
ERCC6-208ENST00000515869 HECW1Q76N89 1606 aa11.61□□□□□ -0.55
ERCC6-208ENST00000515869 PLEKHG5O94827 1062 aa11.61□□□□□ -0.55
ERCC6-208ENST00000515869 AFAP1Q8N556 730 aa11.61□□□□□ -0.55
ERCC6-208ENST00000515869 SPATA31E1Q6ZUB1 1445 aa11.6□□□□□ -0.55
ERCC6-208ENST00000515869 CARD11Q9BXL7 1154 aa11.6□□□□□ -0.55
ERCC6-208ENST00000515869 DHX29Q7Z478 1369 aaKnown RBP11.6□□□□□ -0.55
ERCC6-208ENST00000515869 RNF123Q5XPI4 1314 aa11.6□□□□□ -0.55
ERCC6-208ENST00000515869 PDE4AP27815 886 aa11.59□□□□□ -0.55
ERCC6-208ENST00000515869 RRP1P56182 461 aaKnown RBP11.59□□□□□ -0.55
ERCC6-208ENST00000515869 TCOF1Q13428 1488 aaKnown RBP11.59□□□□□ -0.55
ERCC6-208ENST00000515869 NUTM2DQ5VT03 806 aaPredicted RBP11.58□□□□□ -0.55
ERCC6-208ENST00000515869 RCAN3Q9UKA8 241 aa11.58□□□□□ -0.55
ERCC6-208ENST00000515869 PBRM1Q86U86 1689 aa11.58□□□□□ -0.56
ERCC6-208ENST00000515869 TEX14Q8IWB6 1497 aa11.58□□□□□ -0.56
ERCC6-208ENST00000515869 GGT6Q6P531 493 aa11.58□□□□□ -0.56
ERCC6-208ENST00000515869 AEBP2Q6ZN18 517 aaPredicted RBP11.58□□□□□ -0.56
ERCC6-208ENST00000515869 IQGAP2Q13576 1575 aa11.57□□□□□ -0.56
ERCC6-208ENST00000515869 SAMD9Q5K651 1589 aa11.57□□□□□ -0.56
ERCC6-208ENST00000515869 EPRSP07814 1512 aaKnown RBP11.57□□□□□ -0.56
ERCC6-208ENST00000515869 MIA2Q96PC5 1412 aa11.57□□□□□ -0.56
ERCC6-208ENST00000515869 SKAP1Q86WV1 359 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms