RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 RIMBP3Q9UFD9 1639 aa13.39□□□□□ -0.27
SFXN1-211ENST00000515736 BRPF1P55201 1214 aaPredicted RBP13.38□□□□□ -0.27
SFXN1-211ENST00000515736 E2F4Q16254 413 aa13.37□□□□□ -0.27
SFXN1-211ENST00000515736 ZC3H15Q8WU90 426 aaKnown RBP13.37□□□□□ -0.27
SFXN1-211ENST00000515736 EIF4G3O43432 1585 aaKnown RBP13.37□□□□□ -0.27
SFXN1-211ENST00000515736 ABCC8Q09428 1581 aa13.37□□□□□ -0.27
SFXN1-211ENST00000515736 FBXO22Q8NEZ5 403 aa13.36□□□□□ -0.27
SFXN1-211ENST00000515736 ARXQ96QS3 562 aa13.36□□□□□ -0.27
SFXN1-211ENST00000515736 DNMBPQ6XZF7 1577 aa13.36□□□□□ -0.27
SFXN1-211ENST00000515736 C14orf37Q86TY3 774 aa13.35□□□□□ -0.27
SFXN1-211ENST00000515736 TESPA1A2RU30 521 aaPredicted RBP13.33□□□□□ -0.28
SFXN1-211ENST00000515736 NLRP6P59044 892 aa13.33□□□□□ -0.28
SFXN1-211ENST00000515736 CHD1O14646 1710 aa13.33□□□□□ -0.28
SFXN1-211ENST00000515736 EFCAB3Q8N7B9 438 aa13.32□□□□□ -0.28
SFXN1-211ENST00000515736 SOX12O15370 315 aa13.31□□□□□ -0.28
SFXN1-211ENST00000515736 ARHGEF11O15085 1522 aa13.3□□□□□ -0.28
SFXN1-211ENST00000515736 SEMA3EO15041 775 aa13.3□□□□□ -0.28
SFXN1-211ENST00000515736 TARBP1Q13395 1621 aaKnown RBP13.29□□□□□ -0.28
SFXN1-211ENST00000515736 IFNL1Q8IU54 200 aa13.29□□□□□ -0.28
SFXN1-211ENST00000515736 PHF8Q9UPP1 1060 aa13.29□□□□□ -0.28
SFXN1-211ENST00000515736 CABP2Q9NPB3 220 aa13.28□□□□□ -0.28
SFXN1-211ENST00000515736 AQRO60306 1485 aaKnown RBP eCLIP13.28□□□□□ -0.284e-9■■■■□ 20.2
SFXN1-211ENST00000515736 SLC24A3Q9HC58 644 aa13.26□□□□□ -0.29
SFXN1-211ENST00000515736 NEUROD2Q15784 382 aa13.25□□□□□ -0.29
SFXN1-211ENST00000515736 POLA1P09884 1462 aaPredicted RBP13.24□□□□□ -0.29
SFXN1-211ENST00000515736 NCKAP5LQ9HCH0 1330 aa13.24□□□□□ -0.29
SFXN1-211ENST00000515736 PRKAR2AP13861 404 aaKnown RBP13.23□□□□□ -0.29
SFXN1-211ENST00000515736 MAP3K13O43283 966 aa13.22□□□□□ -0.29
SFXN1-211ENST00000515736 CYB5RLQ6IPT4 315 aa13.21□□□□□ -0.29
SFXN1-211ENST00000515736 KIF12Q96FN5 646 aa13.21□□□□□ -0.29
SFXN1-211ENST00000515736 RAD54L2Q9Y4B4 1467 aa13.21□□□□□ -0.3
SFXN1-211ENST00000515736 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
SFXN1-211ENST00000515736 ZMYND10O75800 440 aa13.19□□□□□ -0.3
SFXN1-211ENST00000515736 MFSD10Q14728 455 aa13.19□□□□□ -0.3
SFXN1-211ENST00000515736 SOGA1O94964 1423 aa13.19□□□□□ -0.3
SFXN1-211ENST00000515736 PDE4AP27815 886 aa13.18□□□□□ -0.3
SFXN1-211ENST00000515736 SMYD5Q6GMV2 418 aa13.18□□□□□ -0.3
SFXN1-211ENST00000515736 LARP6Q9BRS8 491 aaKnown RBP13.18□□□□□ -0.3
SFXN1-211ENST00000515736 TDRD9Q8NDG6 1382 aaKnown RBP13.18□□□□□ -0.3
SFXN1-211ENST00000515736 FGD5Q6ZNL6 1462 aa13.17□□□□□ -0.3
SFXN1-211ENST00000515736 ARIH1Q9Y4X5 557 aaPredicted RBP13.17□□□□□ -0.3
SFXN1-211ENST00000515736 WDR97A6NE52 1622 aa13.15□□□□□ -0.3
SFXN1-211ENST00000515736 CRISPLD2Q9H0B8 497 aa13.15□□□□□ -0.3
SFXN1-211ENST00000515736 SNAPC4Q5SXM2 1469 aa13.15□□□□□ -0.3
SFXN1-211ENST00000515736 ARAP1Q96P48 1450 aa13.15□□□□□ -0.3
SFXN1-211ENST00000515736 FXR2P51116 673 aaKnown RBP eCLIP13.14□□□□□ -0.31
SFXN1-211ENST00000515736 MS4A4AQ96JQ5 239 aa13.14□□□□□ -0.31
SFXN1-211ENST00000515736 CUX1P39880 1505 aa13.13□□□□□ -0.31
SFXN1-211ENST00000515736 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
SFXN1-211ENST00000515736 CHMP7Q8WUX9 453 aaPredicted RBP13.11□□□□□ -0.31
SFXN1-211ENST00000515736 DDX27Q96GQ7 796 aaKnown RBP13.11□□□□□ -0.31
SFXN1-211ENST00000515736 PBRM1Q86U86 1689 aa13.11□□□□□ -0.31
SFXN1-211ENST00000515736 BARGINQ6ZT62 677 aa13.1□□□□□ -0.31
SFXN1-211ENST00000515736 HOMEZQ8IX15 550 aa13.1□□□□□ -0.31
SFXN1-211ENST00000515736 MAGI1Q96QZ7 1491 aaPredicted RBP13.1□□□□□ -0.31
SFXN1-211ENST00000515736 CLASP1Q7Z460 1538 aa13.09□□□□□ -0.31
SFXN1-211ENST00000515736 CAMK2BQ13554 666 aa13.09□□□□□ -0.31
SFXN1-211ENST00000515736 GRIN2BQ13224 1484 aa13.09□□□□□ -0.31
SFXN1-211ENST00000515736 EEA1Q15075 1411 aa13.07□□□□□ -0.32
SFXN1-211ENST00000515736 SYNJ2O15056 1496 aa13.05□□□□□ -0.32
SFXN1-211ENST00000515736 GAPVD1Q14C86 1478 aa13.04□□□□□ -0.32
SFXN1-211ENST00000515736 DAXXQ9UER7 740 aaPredicted RBP13.03□□□□□ -0.32
SFXN1-211ENST00000515736 ABCA5Q8WWZ7 1642 aa13.01□□□□□ -0.33
SFXN1-211ENST00000515736 AK7Q96M32 723 aa13□□□□□ -0.33
SFXN1-211ENST00000515736 ABCA10Q8WWZ4 1543 aa12.98□□□□□ -0.33
SFXN1-211ENST00000515736 GOLGA2Q08379 1002 aa12.98□□□□□ -0.33
SFXN1-211ENST00000515736 RBM26Q5T8P6 1007 aaKnown RBP12.98□□□□□ -0.33
SFXN1-211ENST00000515736 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
SFXN1-211ENST00000515736 WRNQ14191 1432 aaPredicted RBP eCLIP12.97□□□□□ -0.33
SFXN1-211ENST00000515736 MLLT3P42568 568 aaPredicted RBP12.97□□□□□ -0.33
SFXN1-211ENST00000515736 BIVM-ERCC5R4GMW8 1640 aa12.96□□□□□ -0.33
SFXN1-211ENST00000515736 GPIHBP1Q8IV16 184 aa12.96□□□□□ -0.33
SFXN1-211ENST00000515736 TMEM106CQ9BVX2 250 aa12.96□□□□□ -0.33
SFXN1-211ENST00000515736 PHF12Q96QT6 1004 aa12.95□□□□□ -0.34
SFXN1-211ENST00000515736 LOC105371045A0A1W2PR82 267 aa12.94□□□□□ -0.34
SFXN1-211ENST00000515736 PPP1R15BQ5SWA1 713 aa12.93□□□□□ -0.34
SFXN1-211ENST00000515736 PIP4P2Q8N4L2 257 aa12.93□□□□□ -0.34
SFXN1-211ENST00000515736 GPBP1L1Q9HC44 474 aaPredicted RBP12.93□□□□□ -0.34
SFXN1-211ENST00000515736 ADAMTS12P58397 1594 aa12.93□□□□□ -0.34
SFXN1-211ENST00000515736 GRIN2AQ12879 1464 aa12.92□□□□□ -0.34
SFXN1-211ENST00000515736 TOP2BQ02880 1626 aa12.92□□□□□ -0.34
SFXN1-211ENST00000515736 MKRN3Q13064 507 aaKnown RBP12.92□□□□□ -0.34
SFXN1-211ENST00000515736 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
SFXN1-211ENST00000515736 KRI1Q8N9T8 703 aaKnown RBP12.91□□□□□ -0.34
SFXN1-211ENST00000515736 GPHNQ9NQX3 736 aaPredicted RBP12.91□□□□□ -0.34
SFXN1-211ENST00000515736 CEP170Q5SW79 1584 aa12.9□□□□□ -0.35
SFXN1-211ENST00000515736 ERCC6L2Q5T890 1561 aa12.9□□□□□ -0.35
SFXN1-211ENST00000515736 TRPC6Q9Y210 931 aa12.88□□□□□ -0.35
SFXN1-211ENST00000515736 KIF21BO75037 1637 aa12.88□□□□□ -0.35
SFXN1-211ENST00000515736 ILDR1Q86SU0 546 aaPredicted RBP12.87□□□□□ -0.35
SFXN1-211ENST00000515736 KDM4CQ9H3R0 1056 aa12.87□□□□□ -0.35
SFXN1-211ENST00000515736 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
SFXN1-211ENST00000515736 IL27Q8NEV9 243 aa12.86□□□□□ -0.35
SFXN1-211ENST00000515736 DPYSL4O14531 572 aa12.85□□□□□ -0.35
SFXN1-211ENST00000515736 TRIM66O15016 1216 aa12.85□□□□□ -0.35
SFXN1-211ENST00000515736 EMILIN3Q9NT22 766 aa12.85□□□□□ -0.35
SFXN1-211ENST00000515736 FHAD1B1AJZ9 1412 aa12.85□□□□□ -0.35
SFXN1-211ENST00000515736 NUP160Q12769 1436 aa12.85□□□□□ -0.35
SFXN1-211ENST00000515736 SHROOM2Q13796 1616 aa12.84□□□□□ -0.35
SFXN1-211ENST00000515736 SPDYE16A6NNV3 312 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms