RNA–Protein interactions for RNA: ENST00000515629.5

SLC38A9-223, Transcript of solute carrier family 38 member 9, human

TSL 2 BASIC

Gene SLC38A9, Length 2,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-223	ENST00000515629	AEBP1	Q8IUX7	1158 aa		6.22	□□□□□ -1.41
SLC38A9-223	ENST00000515629	USP35	Q9P2H5	1018 aa		6.22	□□□□□ -1.41
SLC38A9-223	ENST00000515629	SNAPC4	Q5SXM2	1469 aa		6.2	□□□□□ -1.42
SLC38A9-223	ENST00000515629	NEFL	P07196	543 aa		6.2	□□□□□ -1.42
SLC38A9-223	ENST00000515629	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	6.2	□□□□□ -1.42
SLC38A9-223	ENST00000515629	FGD5	Q6ZNL6	1462 aa		6.2	□□□□□ -1.42
SLC38A9-223	ENST00000515629	CHMP7	Q8WUX9	453 aa	Predicted RBP	6.2	□□□□□ -1.42
SLC38A9-223	ENST00000515629	SLC24A3	Q9HC58	644 aa		6.2	□□□□□ -1.42
SLC38A9-223	ENST00000515629	CLASP1	Q7Z460	1538 aa		6.18	□□□□□ -1.42
SLC38A9-223	ENST00000515629	CUX1	P39880	1505 aa		6.18	□□□□□ -1.42
SLC38A9-223	ENST00000515629	MAGI1	Q96QZ7	1491 aa	Predicted RBP	6.18	□□□□□ -1.42
SLC38A9-223	ENST00000515629	TMCO4	Q5TGY1	634 aa		6.17	□□□□□ -1.42
SLC38A9-223	ENST00000515629	GRIN2B	Q13224	1484 aa		6.17	□□□□□ -1.42
SLC38A9-223	ENST00000515629	CCDC82	Q8N4S0	544 aa		6.17	□□□□□ -1.42
SLC38A9-223	ENST00000515629	WDR97	A6NE52	1622 aa		6.17	□□□□□ -1.42
SLC38A9-223	ENST00000515629	SYNJ1	O43426	1573 aa		6.17	□□□□□ -1.42
SLC38A9-223	ENST00000515629	SYNJ2	O15056	1496 aa		6.16	□□□□□ -1.42
SLC38A9-223	ENST00000515629	MFAP1	P55081	439 aa	Known RBP	6.16	□□□□□ -1.42
SLC38A9-223	ENST00000515629	BCL11B	Q9C0K0	894 aa	Predicted RBP	6.16	□□□□□ -1.42
SLC38A9-223	ENST00000515629	FAM177A1	Q8N128	213 aa	Predicted RBP	6.15	□□□□□ -1.42
SLC38A9-223	ENST00000515629	ZNF692	Q9BU19	519 aa	Predicted RBP	6.15	□□□□□ -1.43
SLC38A9-223	ENST00000515629	GAPVD1	Q14C86	1478 aa		6.14	□□□□□ -1.43
SLC38A9-223	ENST00000515629	IRX6	P78412	446 aa	Predicted RBP	6.13	□□□□□ -1.43
SLC38A9-223	ENST00000515629	CWC22	Q9HCG8	908 aa	Known RBP	6.13	□□□□□ -1.43
SLC38A9-223	ENST00000515629	PPM1G	O15355	546 aa	Predicted RBP	6.12	□□□□□ -1.43
SLC38A9-223	ENST00000515629	BCCIP	Q9P287	314 aa	Known RBP eCLIP	6.12	□□□□□ -1.43
SLC38A9-223	ENST00000515629		E9PSI1	815 aa		6.12	□□□□□ -1.43
SLC38A9-223	ENST00000515629	ZC3H15	Q8WU90	426 aa	Known RBP	6.12	□□□□□ -1.43
SLC38A9-223	ENST00000515629	SPINK5	Q9NQ38	1064 aa	Predicted RBP	6.12	□□□□□ -1.43
SLC38A9-223	ENST00000515629	PBRM1	Q86U86	1689 aa		6.12	□□□□□ -1.43
SLC38A9-223	ENST00000515629	ABCA10	Q8WWZ4	1543 aa		6.12	□□□□□ -1.43
SLC38A9-223	ENST00000515629	POLA2	Q14181	598 aa		6.12	□□□□□ -1.43
SLC38A9-223	ENST00000515629	MKRN3	Q13064	507 aa	Known RBP	6.11	□□□□□ -1.43
SLC38A9-223	ENST00000515629	IL27	Q8NEV9	243 aa		6.11	□□□□□ -1.43
SLC38A9-223	ENST00000515629	GZF1	Q9H116	711 aa	Predicted RBP	6.11	□□□□□ -1.43
SLC38A9-223	ENST00000515629	ABCA5	Q8WWZ7	1642 aa		6.11	□□□□□ -1.43
SLC38A9-223	ENST00000515629	ZNF592	Q92610	1267 aa		6.11	□□□□□ -1.43
SLC38A9-223	ENST00000515629	ERCC6L2	Q5T890	1561 aa		6.1	□□□□□ -1.43
SLC38A9-223	ENST00000515629	GPBP1L1	Q9HC44	474 aa	Predicted RBP	6.1	□□□□□ -1.43
SLC38A9-223	ENST00000515629	BRPF3	Q9ULD4	1205 aa		6.1	□□□□□ -1.43
SLC38A9-223	ENST00000515629	ZBTB12	Q9Y330	459 aa	Predicted RBP	6.1	□□□□□ -1.43
SLC38A9-223	ENST00000515629	SPOCK2	Q92563	424 aa		6.1	□□□□□ -1.43
SLC38A9-223	ENST00000515629	GRIN2A	Q12879	1464 aa		6.09	□□□□□ -1.43
SLC38A9-223	ENST00000515629	ZFP91	Q96JP5	570 aa	Predicted RBP	6.09	□□□□□ -1.43
SLC38A9-223	ENST00000515629	NUP160	Q12769	1436 aa		6.08	□□□□□ -1.44
SLC38A9-223	ENST00000515629	WRN	Q14191	1432 aa	Predicted RBP eCLIP	6.08	□□□□□ -1.44
SLC38A9-223	ENST00000515629	CEP170	Q5SW79	1584 aa		6.07	□□□□□ -1.44
SLC38A9-223	ENST00000515629	TRAIP	Q9BWF2	469 aa		6.07	□□□□□ -1.44
SLC38A9-223	ENST00000515629	ADAMTS12	P58397	1594 aa		6.07	□□□□□ -1.44
SLC38A9-223	ENST00000515629	ARID4B	Q4LE39	1312 aa	Predicted RBP	6.06	□□□□□ -1.44
SLC38A9-223	ENST00000515629	CERS3	Q8IU89	383 aa		6.06	□□□□□ -1.44
SLC38A9-223	ENST00000515629	P3H3	Q8IVL6	736 aa		6.06	□□□□□ -1.44
SLC38A9-223	ENST00000515629	KCNV2	Q8TDN2	545 aa		6.06	□□□□□ -1.44
SLC38A9-223	ENST00000515629	PKNOX2	Q96KN3	472 aa		6.06	□□□□□ -1.44
SLC38A9-223	ENST00000515629	WDR70	Q9NW82	654 aa		6.06	□□□□□ -1.44
SLC38A9-223	ENST00000515629	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	6.06	□□□□□ -1.44
SLC38A9-223	ENST00000515629	FHAD1	B1AJZ9	1412 aa		6.06	□□□□□ -1.44
SLC38A9-223	ENST00000515629	C1QBP	Q07021	282 aa	Known RBP	6.06	□□□□□ -1.44
SLC38A9-223	ENST00000515629	NKX1-1	Q15270	411 aa	Predicted RBP	6.05	□□□□□ -1.44
SLC38A9-223	ENST00000515629	PSMD1	Q99460	953 aa		6.05	□□□□□ -1.44
SLC38A9-223	ENST00000515629	RSPH4A	Q5TD94	716 aa		6.05	□□□□□ -1.44
SLC38A9-223	ENST00000515629	CCDC136	Q96JN2	1154 aa		6.05	□□□□□ -1.44
SLC38A9-223	ENST00000515629		A0A0U1RQG5	324 aa	Predicted RBP	6.04	□□□□□ -1.44
SLC38A9-223	ENST00000515629	TOP2B	Q02880	1626 aa		6.04	□□□□□ -1.44
SLC38A9-223	ENST00000515629	SHROOM2	Q13796	1616 aa		6.04	□□□□□ -1.44
SLC38A9-223	ENST00000515629	FGD1	P98174	961 aa		6.04	□□□□□ -1.44
SLC38A9-223	ENST00000515629	BIVM-ERCC5	R4GMW8	1640 aa		6.04	□□□□□ -1.44
SLC38A9-223	ENST00000515629	PRG4	Q92954	1404 aa	Predicted RBP	6.03	□□□□□ -1.44
SLC38A9-223	ENST00000515629	CAPN15	O75808	1086 aa		6.03	□□□□□ -1.44
SLC38A9-223	ENST00000515629	HS6ST3	Q8IZP7	471 aa		6.03	□□□□□ -1.44
SLC38A9-223	ENST00000515629	ZNF526	Q8TF50	670 aa	Predicted RBP	6.03	□□□□□ -1.44
SLC38A9-223	ENST00000515629	FBXW7	Q969H0	707 aa		6.03	□□□□□ -1.44
SLC38A9-223	ENST00000515629	JPH4	Q96JJ6	628 aa		6.03	□□□□□ -1.44
SLC38A9-223	ENST00000515629	ERICH3	Q5RHP9	1530 aa		6.03	□□□□□ -1.44
SLC38A9-223	ENST00000515629	TICAM2	Q86XR7	235 aa		6.03	□□□□□ -1.44
SLC38A9-223	ENST00000515629	TMED8	Q6PL24	325 aa	Predicted RBP	6.02	□□□□□ -1.44
SLC38A9-223	ENST00000515629	GTPBP6	O43824	516 aa	Predicted RBP	6.02	□□□□□ -1.45
SLC38A9-223	ENST00000515629	STAG3	Q9UJ98	1225 aa		6.02	□□□□□ -1.45
SLC38A9-223	ENST00000515629	KIF13A	Q9H1H9	1805 aa		6.01	□□□□□ -1.45
SLC38A9-223	ENST00000515629	CLUAP1	Q96AJ1	413 aa		6.01	□□□□□ -1.45
SLC38A9-223	ENST00000515629	ZNF316	A6NFI3	1004 aa	Predicted RBP	6.01	□□□□□ -1.45
SLC38A9-223	ENST00000515629	FAM69C	Q0P6D2	419 aa		6.01	□□□□□ -1.45
SLC38A9-223	ENST00000515629	RETREG2	Q8NC44	543 aa		6	□□□□□ -1.45
SLC38A9-223	ENST00000515629	CLSTN1	O94985	981 aa		6	□□□□□ -1.45
SLC38A9-223	ENST00000515629	SSUH2	Q9Y2M2	353 aa		6	□□□□□ -1.45
SLC38A9-223	ENST00000515629	ABCC10	Q5T3U5	1492 aa		5.99	□□□□□ -1.45
SLC38A9-223	ENST00000515629	RUSC2	Q8N2Y8	1516 aa		5.99	□□□□□ -1.45
SLC38A9-223	ENST00000515629	IRF5	Q13568	498 aa		5.98	□□□□□ -1.45
SLC38A9-223	ENST00000515629	MYT1L	Q9UL68	1186 aa		5.98	□□□□□ -1.45
SLC38A9-223	ENST00000515629	MAPKBP1	O60336	1514 aa		5.97	□□□□□ -1.45
SLC38A9-223	ENST00000515629	KDM4A	O75164	1064 aa		5.97	□□□□□ -1.45
SLC38A9-223	ENST00000515629	CCDC125	Q86Z20	511 aa		5.97	□□□□□ -1.45
SLC38A9-223	ENST00000515629	CIZ1	Q9ULV3	898 aa	Predicted RBP	5.97	□□□□□ -1.45
SLC38A9-223	ENST00000515629	DIP2B	Q9P265	1576 aa		5.97	□□□□□ -1.45
SLC38A9-223	ENST00000515629	SPDYE2B	A6NHP3	402 aa		5.96	□□□□□ -1.45
SLC38A9-223	ENST00000515629	SPDYE6	P0CI01	402 aa		5.96	□□□□□ -1.45
SLC38A9-223	ENST00000515629	SPDYE2	Q495Y8	402 aa		5.96	□□□□□ -1.45
SLC38A9-223	ENST00000515629	ADCY10	Q96PN6	1610 aa		5.96	□□□□□ -1.46
SLC38A9-223	ENST00000515629	ZNF326	Q5BKZ1	582 aa	Known RBP	5.96	□□□□□ -1.46
SLC38A9-223	ENST00000515629	KDM4C	Q9H3R0	1056 aa		5.96	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms